Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Helicosporidium_20sp._20ATCC_2050920_20[genbank_20GCA_5F000690575.1_
202014-05-13] 5,666 sequences; 12,373,820 total letters
Query= NC_008187.1
Length=191100
Score E
Sequences producing significant alignments: (Bits) Value
seq81 107 2e-18
seq74 100 3e-16
>seq81
Length=8194
Score = 107 bits (118), Expect = 2e-18
Identities = 146/201 (73%), Gaps = 2/201 (1%)
Strand=Plus/Plus
Query 126181 GTGTAAATGTAGCGGGGAGCTGCCGAA-TCCTTGCCTCCCTCCAACCGCGTGCCAAACTG 126239
||| | |||||||| | |||| || |||||||| |||| || ||||||||||||||
Sbjct 311 GTGAAGATGTAGCGCGC-GCTGGCGGCGTCCTTGCCGCCCTGCAGGCGCGTGCCAAACTG 369
Query 126240 ACCGTCCGGCTCCAACAACTGCACATTGTTGGCTCCCACAAAGTCCTGCGCAAACTTGAC 126299
||| | |||| ||| | | || ||||||| |||||||||||||| || | ||
Sbjct 370 ACCCTGCGGCACCAGGTAGTTGACGTTGTTGGAGCCCACAAAGTCCTGGGCTAGGCCCAC 429
Query 126300 AATGGTCTCGCACAGGTTCTGCTCGCCGTGCTTGTAGTCGGTCTGCTCGGCCACGTAGCC 126359
||||| | ||| ||||||||| | ||| || ||| ||| |||||||||||
Sbjct 430 GATGGTGCCCATGAGGGAGGTCTCGCCGTGATGGTACGCGCTCTTCTCCGCCACGTAGCC 489
Query 126360 GCTCAGCTGCGCAACCTTGAT 126380
||||||||| ||||||||
Sbjct 490 CGCCAGCTGCGCGACCTTGAT 510
>seq74
Length=8418
Score = 100 bits (110), Expect = 3e-16
Identities = 106/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 15059 GGCGACAAGTTTTGCTCTGGTATGGCGCAAAAGGGCACGTGCGGCATGATTTTCCCCCAG 15118
|||||||||||| ||| | | ||||||||||| |||||| | | | |||||
Sbjct 6366 GGCGACAAGTTTGCCTCGAGACACGGACAAAAGGGCACCATCGGCATCACCTACACCCAG 6425
Query 15119 GAAGACATGCCCTTTACCGCGTCAGGCATGACGCCCGACATTATCATCAACCCCAACTGC 15178
|| |||||||| ||| ||||| ||||| ||||||| | |||||||||||| || |
Sbjct 6426 GAGGACATGCCTTTTTCCGCGCAGGGCATCGTGCCCGACCTCATCATCAACCCCCACGCC 6485
Query 15179 ATCCCGTCCCGCATGACCAT 15198
||||| || |||||||||||
Sbjct 6486 ATCCCCTCGCGCATGACCAT 6505
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 611348698161600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |