Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicosporidium_20sp._20ATCC_2050920_20[genbank_20GCA_5F000690575.1_ 202014-05-13] 5,666 sequences; 12,373,820 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq1743 242 7e-59 seq2724 179 7e-40 seq60 165 2e-35 seq114 163 5e-35 seq2314 127 4e-24 seq81 125 1e-23 seq3504 116 7e-21 seq139 105 1e-17 >seq1743 Length=2439 Score = 242 bits (268), Expect = 7e-59 Identities = 302/411 (73%), Gaps = 2/411 (0%) Strand=Plus/Plus Query 173186 TACGGGACCCACGTTCTCCTGGAATGCGCGAGGCTCTATGGCGGTGTCCAGCGGTTCATC 173245 ||||| || ||||| || ||||| | | || || ||| | ||| || || | Sbjct 1421 TACGGCACGCACGTGCTGCTGGAGTCTTGCCGCCTGTACGGCCGCATCCGTCGCTTTGTG 1480 Query 173246 AATGTGTCTACCGACGAAGTATACGGCGAGAGCAGTCTGGGCAAAAAAGAAGGCCTCGAT 173305 || ||||| || ||||| || ||||||||| || |||||||| | || ||||| | Sbjct 1481 AACGTGTCCACGGACGAGGTGTACGGCGAGTCGAGCCTGGGCAAGGAGGAGGGCCTGCAA 1540 Query 173306 GAACACTCGTCC-CTCGAGCCAACAAACCCATATGCAGCAGCCAAGGCTGGTGCCGAAAT 173364 || || | || || ||||| || ||||| || | || |||||||| || ||||| || Sbjct 1541 GAG-ACCAGCCCTCTGGAGCCCACCAACCCCTACTCTGCGGCCAAGGCCGGCGCCGAGAT 1599 Query 173365 GATGGCACGTGCATATCACACATCGTACAAGCTACCAGTCATCGTGACGCGCGGCAACAA 173424 |||||| || || || ||||| ||| || || |||||||| |||||||||||||| Sbjct 1600 GATGGCGCGCGCGTACCACACCAGCTACCGTCTGCCCGTCATCGTCACGCGCGGCAACAA 1659 Query 173425 TGTGTATGGCCCGCATCAGTTCCCCGAAAAAATGATCCCAAAATTTATTCTTCGCGCAAC 173484 ||||| |||||||| |||||||| || || ||||| || || || ||||| ||||| Sbjct 1660 CGTGTACGGCCCGCACCAGTTCCCGGAGAAGATGATTCCCAAGTTCATTCTCCGCGCCCG 1719 Query 173485 CCGTGGCCTGGACCTCCCCATCCACGGGGACGGCGGGGCTTTGCGGTCGTATTTGTATGT 173544 ||| |||| |||||| ||||||||||| ||||| ||| |||||||||| |||| || Sbjct 1720 CCGCGGCCAGGACCTGCCCATCCACGGAGACGGGCTGGCGGTGCGGTCGTACCTGTACGT 1779 Query 173545 TGATGACGTGGCAGAGGCTTACATTACTATTTTGCTCAAGGGCAATGTCGG 173595 || |||||||| | ||| ||||| | ||| | |||||||||| || || Sbjct 1780 GGAGGACGTGGCGGCGGCCTACATCAAGATTCTCATCAAGGGCAAGGTGGG 1830 Score = 161 bits (178), Expect = 2e-34 Identities = 171/224 (76%), Gaps = 2/224 (1%) Strand=Plus/Plus Query 172967 GTGGTGCTCGACAAGATGGACTACTGCGCGACCCTGAACAACCTGGCAACAGTTCGAGAT 173026 |||||||| |||||| ||||||| ||||| || || |||||| || | | || ||| Sbjct 919 GTGGTGCTGGACAAGCTGGACTATTGCGCCACTCTCAACAACTTGACGAGCGTCAAGGAT 978 Query 173027 -GCTCCCAATTTCAAGTTCGTCAAGGGAGATATTCAATCTACTGATCTCCTGGCGCACGT 173085 |||| ||||| ||||| ||||| ||||| ||||| || | ||| | |||| |||| | Sbjct 979 TGCTCT-AATTTTAAGTTTGTCAAAGGAGACATTCAGTCGGCGGATTTGCTGGTGCACAT 1037 Query 173086 CCTGAAGCAGGAAAAAATTGACACGATTATGCACTTTGCTGCGCAGACCCATGTGGACAA 173145 |||| ||||||| |||| || ||| | ||||||||||| || ||||| || ||||| || Sbjct 1038 CCTGGAGCAGGAGGAAATCGATACGGTGATGCACTTTGCCGCCCAGACGCACGTGGATAA 1097 Query 173146 CTCGTTCGGTAACTCGCTGGCATTTACCATGAACAACNNNTACG 173189 || || ||||||||||| || |||||||||||| |||| Sbjct 1098 TAGCTTTGGCAACTCGCTGGCTTTCACCATGAACAACACGTACG 1141 >seq2724 Length=1646 Score = 179 bits (198), Expect = 7e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| || || | |||| || || || ||||| || |||||||| || ||||| Sbjct 1309 CCGCCGCGCAGACGGAGGACCAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAC 1368 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || || | || |||||||| ||| Sbjct 1369 AGAGTGCGGCCATCCTCCAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCGGGAGGA 1428 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| ||||||||| |||||||||||| | || || || Sbjct 1429 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCCGAAGACTCCACC 1488 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| || ||||| || ||||||||||| |||||||| Sbjct 1489 TCGAGGGTGATGGTCTTGCCCGTCAGCGTCTTGACGAAGATCTGCAT 1535 >seq60 Length=8765 Score = 165 bits (182), Expect = 2e-35 Identities = 324/472 (69%), Gaps = 8/472 (2%) Strand=Plus/Minus Query 9933 TTCATGACGCCCGCCTTCTGGTA--CTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGC 9990 ||||||||||| ||||| ||||| |||||| | || |||||| ||||||| ||||| Sbjct 3060 TTCATGACGCCGGCCTTTTGGTAGTCTCCGA--CGCGCTTCTCGAAAAAGTTGGTCTTGC 3003 Query 9991 CCTCGAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGT 10050 ||| || || ||||||||||| |||| || || || |||| | ||||||| Sbjct 3002 CCTGCAGCGAGATGAGCTCCATCCAGTCGAACGGATTGGTGGCGTTGTAGAGCTTGGGCG 2943 Query 10051 AACCGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCG 10110 ||| || || || | ||||| ||| ||||| ||||||||||||||||| | Sbjct 2942 CACCCAGGGCGACGAGCAGCCGGTCGCTCACAAACTCAATGTACTGGCTCATCAGCTTGC 2883 Query 10111 AGTTCATGCCAATCATGCGGCA-GGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCG 10169 ||||||||| || | | || || | ||| ||||| | || ||||| ||| | | Sbjct 2882 CGTTCATGCCGATGA-GATCCACCGGCAGGGCATCGCAGACAAACTCCTTCTCGATTTCC 2824 Query 10170 ACCGCTTCCTCGACGATGCTCTTTACCACG-TCAAGGGACAGCTTGTTCTCGAGCTTCGA 10228 || || || | |||| ||| || ||| || | || ||| || ||||||| | || Sbjct 2823 ACGGCCTCGCCCACGA-GCTGGTTCAGACGCTCGATGGCGAGCGGGTGCTCGAGCATGGA 2765 Query 10229 ATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGA 10288 || || || |||| | ||| |||||||| || || ||||| ||||||||| Sbjct 2764 GTAGAGCAGGCAGGCAAAGTCGGTGTGCAGGCCCTCATCACGAGAGATGAGCTCGTTGGA 2705 Query 10289 CAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCC 10348 || || ||||||||||| || || || | |||| | |||| |||||| || Sbjct 2704 AAAGGTGAGGCCGGGCATGAGACCGCGCTTCTTGACCCAGTAGATGGAGCAGAAGCTGCC 2645 Query 10349 GGAGAACAGAAGACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAG 10400 | ||| | || |||||||||||| | | || || |||||||| || ||| Sbjct 2644 GCTGAAGAAAATGCCCTCCACGCACGCAAACGCCACCAGGCGCTCCGCAAAG 2593 >seq114 Length=7431 Score = 163 bits (180), Expect = 5e-35 Identities = 406/605 (67%), Gaps = 21/605 (3%) Strand=Plus/Plus Query 31701 CACACCGCCGTTTCGTCCGTAGAAGTGTATTCGACAATCTCGGCACAAAGATTGCTGCCC 31760 ||||| ||||| ||||| | | ||||| ||||| ||||||| || || ||||||| | Sbjct 856 CACACGGCCGTCTCGTCGGGGGCCGTGTACTCGACGATCTCGGTGCACAGGTTGCTGCAC 915 Query 31761 GTGATGGTGCCGGCATTGGACTGCATGTTCTTCACGTT-CACGCTGTCCTTGTTGAGCAC 31819 |||| ||||| || ||| || |||| |||| || || |||||||| |||| Sbjct 916 TTGATCGTGCCCAGGTTCTGCTGGTTGCTCTTGGCGTTGCAGGC-GTCCTTGTACAGCAT 974 Query 31820 GTAAGGCATGCCCGTCTCGATCTGCGTGATGATCATCGCATTCCAGACAT----CGCGCG 31875 ||| ||| |||||||||| |||||| | || || ||| | | |||||| Sbjct 975 GTAGGGCGTGCCCGTCTCCGTCTGCGCCTCCAAAATGGCGAACCACAGCTGCTGCGCGCG 1034 Query 31876 CTTTGACGACTTTCTTCGCACGCCCCTCGGACTCGTAGCGAAGATACAGGTCCTCGTACT 31935 | | || ||| | ||| || |||||| |||||| || || || ||| ||| Sbjct 1035 CAT---CGTCTTGCG-CGCGCGGCCCTCGCGCTCGTACCGCGCGTAGAGCGACTCAAACT 1090 Query 31936 CCTTGCCAAAGGCATCGGTTAGACCGGGACACTCCTTGGGGTCGAAGAGCGACCA-TGCG 31994 | ||| | | || | || || || ||| |||||| ||| || ||| ||| Sbjct 1091 CGGGGCCCCACACGTCCGCCAGGCCCGGCGCCTCGTTGGGGCAGAACAGGCTCCACTGCC 1150 Query 31995 ACATCGGCCTCTACTCGCTTCATGAACAGGTCGTTCAGCCACATCGCGTAAAACAGATTC 32054 | || ||||| || |||||||| ||||||||| | ||||| | |||| ||||| | Sbjct 1151 -CGTCCGCCTCGACGCGCTTCATAAACAGGTCGGGGATCCACAGCCCGTAGAACAGGTCG 1209 Query 32055 CTGGCGCGTTGGGTCTCCTCACCCTGGTTACGTCGGAGCAGCAGGAAGTCCATGATGTCG 32114 | |||||| ||||| || ||||| || || ||| ||||||| | ||| Sbjct 1210 CGGGCGCGAGCCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCCAGCCAGTCCATCACGTCC 1269 Query 32115 GGGTGGTGGGGCTCGAGGTACACGGCGAAAGATCCCTTGCG---GCGACCCCCCTGGTTT 32171 | ||| |||||| |||||||| || || | |||||||| || || ||||||| Sbjct 1270 GCGTGCCAGGGCTCCAGGTACACCGCAAAGGCGCCCTTGCGCTTGCCGCCGCCCTGGTCC 1329 Query 32172 GCGTATGCAGATGTCGTGTCGT---ACACCTTCAGCATGGGTACGATGCCATCAGACTCG 32228 |||| | || | |||||||| |||| ||||||||| || | ||| | | | Sbjct 1330 ACGTA--CCGA-GCCGTGTCGTTGAACACGCGCAGCATGGGCACCACGCCGTTGCTCGTG 1386 Query 32229 CCATTGGTCCCCTGGATCTTGGAACCACGGCCGCGAATGTCGCTCAGGTGCAGGCCGATG 32288 || ||||| ||| |||| | || || | |||| |||||| || |||||| |||||| Sbjct 1387 CCGTTGGTGCCCCGGATGTACGACCCCGTGGCGCGGATGTCGTGCATGTGCAGCCCGATG 1446 Query 32289 CCGCC 32293 ||||| Sbjct 1447 CCGCC 1451 >seq2314 Length=1923 Score = 127 bits (140), Expect = 4e-24 Identities = 319/474 (67%), Gaps = 8/474 (2%) Strand=Plus/Plus Query 9934 TCATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCT 9993 |||||||||| ||| |||||||||| || ||||||||||| ||||| | |||||||| Sbjct 1375 TCATGACGCCGGCCCGCTGGTACTCCCCCACGCGGCGCTCGAAAAAGTTCGTCTTGCCCT 1434 Query 9994 CGAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAAC 10053 ||| || ||||||||||| |||| |||||||||| ||| | | || | ||| | Sbjct 1435 GGAGCGAGATGAGCTCCATCCAGTCGAAGGGGTTCTTGGCCCTGTAGAGCGGCGCGTAGC 1494 Query 10054 CGAGTGCTG-TGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAG 10112 |||| |||| || | |||||| |||||||||| || ||||| || ||| | | | | Sbjct 1495 CGAG-GCTGACGAGCAGGCGGTCGGCCACGAACTGGACGTACTCGCCCATGGCGGCGGCG 1553 Query 10113 TTCATGCCAATCATGCGGCA-GGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGAC 10171 ||||| || || | | || |||| || | |||| || || ||| || Sbjct 1554 TTCATCCCGATGA-GATCCACCGGGAGCGCCGAGGCCGTGAACTCGCGCTCCAGGGCCAC 1612 Query 10172 CGCTTCCTCGACGATGCTCTTTACCACGTCAAGGGACAGCTTGTTC-TCG-AGCTTCGAA 10229 || |||||||||||| | | | | | |||||| | | || ||| Sbjct 1613 GGCCTCCTCGACGATG-GCGTAGGCTTG-CGCCGGACAGAGGGGGCGACGCAGCCCGCGG 1670 Query 10230 TACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGAC 10289 || || || |||| | ||| ||||||||||| || |||| ||||||||| Sbjct 1671 TAGAGCAGGCAGGCAAAGTCGGTGTGCAGGCCCTCGTCCCGAGAAATGAGCTCGTTGGAA 1730 Query 10290 AAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCG 10349 || || || |||||||| || || || |||||| | ||||||||||| | ||| Sbjct 1731 AAGGTGAGCCCCGGCATGAGGCCGCGCTTTTTGAGCCAGTAGATGGCGCAGAAGGCGCCG 1790 Query 10350 GAGAACAGAAGACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGGAG 10403 ||| | | |||||||||||| | | || | ||||||| || |||||| Sbjct 1791 CTGAAGTGGATGCCCTCCACGCACGCAAACGCCAGCAGGCGCTGCGCAAAGGAG 1844 >seq81 Length=8194 Score = 125 bits (138), Expect = 1e-23 Identities = 831/1317 (63%), Gaps = 40/1317 (3%) Strand=Plus/Plus Query 175961 CTCCTTGATGTCTCCCTTGAACCCCCGATACCAAGGGGTCATTGGGAGCATCGTCTCGTT 176020 ||||| |||| ||| ||| || || ||||| || | ||| || ||| | || Sbjct 31 CTCCTCGATGGTGCCCCGGAAGCCGCGGTACCAGGGCGCCATGGGCTCCATGGGCTGTCC 90 Query 176021 GTTAATGAGGCGCTTCACATTGTCTACGATATCCTTGGGGTTGTAAGCCGGAATGTTAGT 176080 || | |||||| |||| ||||| || | || |||||||| |||||| || Sbjct 91 GTCCAGCAGGCGCCTCACGTTGTCCACCACGTCGCGGGGGTTGTGGTTGGGAATGAAGGT 150 Query 176081 GCTAAATCCTGTTCCTATTCCTGACGATCCATTCACCAGGAGAAACGGGATGGTGGGAAC 176140 ||| | || || || || || || || || | ||| | ||| | |||| || Sbjct 151 GCTCCACCCCGTGCCGATGCCCTCCGCGCCGTTGAGCAGCACCGTCGGCAGAATGGGCAC 210 Query 176141 ATAGTATTCCGGTTCAAT--CCGGTCGCCGTCATCCTCGAGGTAGTTCAGCAG-ACGCTC 176197 || | ||||| || || || ||| | || ||| | |||| | |||||| ||| || Sbjct 211 GTACCACTCCGGCTCGATGACCTGTCCC--TCCTCCGCCAGGTTGCGCAGCAGCACG-TC 267 Query 176198 GTCGGCCTTGTGGAAAATATCCCGGGTGTT--GGGGGACAGTTGTGTGAAGATATACCTA 176255 |||||| | || ||| | | | | | || || ||| | |||||||| || | Sbjct 268 GTCGGCG--GCGGGAAAGAGGCGGCGCGCCACGGCGGCCAGGCGCGTGAAGATGTAGCGC 325 Query 176256 GCAGACGCACTGTCCTTGCCTCCGTGAAGGCGGGAACCGAATTGTCCGCGAGGAAGAAGC 176315 || || ||||||||| || || ||||| | || || || || | || | || Sbjct 326 GCGCTGGCGGCGTCCTTGCCGCCCTGCAGGCGCGTGCCAAACTGACCCTGCGGCACCAGG 385 Query 176316 AAATTGATGTTATTCGAACCCACGTAGTCTTGGGCCATTCCGACTATGGCGCCCTGGAGA 176375 | |||| ||| || || ||||| |||| ||||| | || || |||| |||| ||| Sbjct 386 TAGTTGACGTTGTTGGAGCCCACAAAGTCCTGGGCTAGGCCCACGATGGTGCCCATGAGG 445 Query 176376 GACGCCTCGCCGTGGTGATAGCCGGCGTTCTCACTTGTGTATCCGGCAAACTGCGCGACT 176435 || | ||||||||| || || || ||||| ||| || || | ||||||||| Sbjct 446 GAGGTCTCGCCGTGATGGTACGCGCTCTTCTCCGCCACGTAGCCCGCCAGCTGCGCGACC 505 Query 176436 TTGATTTC-TTGTACGAGGTTGCGCTTCAACGCCGAGAACAGAATCTTCCGCTGCGAGGG 176494 ||||| || || | | ||||||||||| || | ||||| ||||| |||||| ||| Sbjct 506 TTGATGTCCTTCTTC-AGGTTGCGCTTGAAGCAGGCAAACAGGATCTTGCGCTGCCCGGG 564 Query 176495 CTTCAGACCATCGACGACCGACGGAATGGAACGCTCTACATCGTATCTTGAAAAAAGGAT 176554 || || || || ||| | || ||||| ||||| | ||| | || |||||||| Sbjct 565 TTTGAGCCCGTCCACGGCGCTGGGGATGGAGCGCTCCAGGTCGGCGCGCGAGAAAAGGAT 624 Query 176555 AAGGTCTTTGTTTATGAAATCCTCCACTGGAATCTTCGTGAGCTTC-TGGTCGAGCTGGT 176613 || || || | |||||| | || |||| || | ||||| | Sbjct 625 GAGCTCGCGATTCACGAAATCGGAGTAGGCTATGCGCGTG-GCGGCGTGGTCCAAAAACG 683 Query 176614 TGCCAGGCTCGAAATCAAGGAGCCACGTCTTCCGTTCGTCCGCCCGAGACTTGTTGAAAG 176673 |||| ||| | || | |||||||| ||| || || ||| || |||| || | Sbjct 684 TGCCGGGCACAAACGCGCGGAGCCACTCCTTGCGCTCCTCCACCTTTTTCTTGGAAAAGG 743 Query 176674 AC-TTGTCAATGCTT--TCGGCCGCGTTGTCAGACCACGTAAGCGTCTTCACCAGGGC-C 176729 | || || || | || || | | || |||| || | || | | | ||| | Sbjct 744 CCATTTCCAGAGCCTGCCCGTCCTCCTGCCCATGCCACACAAAC-TCCTTGCGATGGCGC 802 Query 176730 TTCAGGTTGTTGAAGTACCGCTTGGCGTCATTGGCGTCGGAGGTACCCAGACCCTTGTAA 176789 | ||| | ||||| |||||| || |||| |||||| || ||||||||||| Sbjct 803 TCCAGCGCGGCAAAGTAGGTCTTGGCCTCGGCGGCGGTGGAGGTGCCGAGACCCTTGTAG 862 Query 176790 TACTTAGTCTTCCAGGTAGAGACATCGGATGTCGCGGCCTT----CCACTCTTCGAAATC 176845 ||||| ||||| | ||| |||||| ||| |||| | ||| | || Sbjct 863 TACTTGACGCTCCAG-------CCGCGGCGGTCGCGCTCTTCGCACCACGCCTCGTATTC 915 Query 176846 CGGGATGCTGTAGAACTCCACCATCTTGGTGCCCTTCTTGGCGACCACAATTGGAGTCAC 176905 ||| | | ||||||| | | || | ||||| | || | || || ||||| Sbjct 916 CGGCACGGTGTAGAAGCTGATCTGCTCGCGACCCTTGGTAGCTTTGATGATGGGGGTCAC 975 Query 176906 GAAGCGCTTGAGGAACCCGGGGATCTCGAGCAGCGACGGG----AACTGTGCATGGAAAA 176961 || | | || || || | || ||||| ||| || || ||| || | Sbjct 976 AAACTCCACCAAAAATCCCGGCAGCTTGAGCA--GACTGGGATAAAAGGTG--TGCAGGT 1031 Query 176962 AGTTCAGCACTAGACCAGCAATATGTGAGCCGTCAACGTCCTGGTCTGCCATAATAATCA 177021 |||||| | ||||| || || |||||||| |||||| || | ||| || || | Sbjct 1032 AGTTCATGATGAGACCCTTGATGTGGGAGCCGTCGTGGTCCTGATCCGTCATGATCATGA 1091 Query 177022 CAGACCCGTACCGAAGAGAGGACGC-GTCCTTGTAGTTCACACCATTGCGGAGACCGAGA 177080 | ||||| || || | | ||| || ||||| | | || | | || || || Sbjct 1092 GATGGCCGTAGCGCAGCG-TGCCGCTGTTGTTGTACTCCTTGCCGTGCTGCAGGCCCAGG 1150 Query 177081 ATTTGTTTGATGGCAGTAATCTCGGCGTTGTTAGTAATACTAGACACAGACGCATCACGG 177140 || || |||||| ||||||||||||| | || || | | || ||||| || Sbjct 1151 ATCTGCTTGATGTTTTGAATCTCGGCGTTGCCCGAGATCTGAGCCGCCGAAGCATCTCGC 1210 Query 177141 ACATTCAGTAGCTTACCACGGAGGGGGAAAATTCCGTAGCGATCCCGACCCACGACAGCA 177200 || || || ||||| || ||||| ||||| | |||||||||||| || ||||| || | Sbjct 1211 ACGTTGAGGAGCTTGCCGCGGAGCGGGAACACTCCGTAGCGATCGCGGCCCACCACCGAC 1270 Query 177201 AGGCCAGCTGTGGCAAGCGTGGCGGCAGAGTCACCCTCTGTCAAAATGAGCGTGCAC 177257 ||||| || ||| || || ||| ||||| ||||| || | ||||| |||||| Sbjct 1271 AGGCCCGCCACGGCCAGAGTCTTGGCCGAGTCTCCCTCGGTGAGGATGAGGGTGCAC 1327 >seq3504 Length=1219 Score = 116 bits (128), Expect = 7e-21 Identities = 69/72 (96%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1104 GCCCGGATAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 1163 Query 84516 CCCACATCGGGC 84527 ||||| |||||| Sbjct 1164 CCCACTTCGGGC 1175 >seq139 Length=7169 Score = 105 bits (116), Expect = 1e-17 Identities = 76/88 (86%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 173095 GGAAAAAATTGACACGATTATGCACTTTGCTGCGCAGACCCATGTGGACAACTCGTTCGG 173154 |||||| || ||||| ||| |||||||||| || ||||| || || |||||||| ||||| Sbjct 4548 GGAAAACATCGACACCATTCTGCACTTTGCCGCCCAGACGCACGTCGACAACTCCTTCGG 4489 Query 173155 TAACTCGCTGGCATTTACCATGAACAAC 173182 ||||||||||| ||||||||||||||| Sbjct 4488 CAACTCGCTGGCCTTTACCATGAACAAC 4461 Score = 93.3 bits (102), Expect = 8e-14 Identities = 217/325 (67%), Gaps = 2/325 (1%) Strand=Plus/Minus Query 173243 ATCAATGTGTCTACCGACGAAGTATACGGCGAGAGCAGTCTGGGCAAAAAAGAAGGCCTC 173302 ||||| ||||| || ||||| || |||||||||| || |||| | ||||||| Sbjct 4311 ATCAACGTGTCCACGGACGAGGTGTACGGCGAGACGAGCGTGGGTCTGGCACAAGGCCT- 4253 Query 173303 GATGAACACTCGTCCC-TCGAGCCAACAAACCCATATGCAGCAGCCAAGGCTGGTGCCGA 173361 | | | | | ||| | | || || ||||| || ||||| |||||||| || || || Sbjct 4252 GCCGGAGAGTTCTCCGATGGCCCCGACCAACCCGTACGCAGCGGCCAAGGCCGGGGCGGA 4193 Query 173362 AATGATGGCACGTGCATATCACACATCGTACAAGCTACCAGTCATCGTGACGCGCGGCAA 173421 | ||||| | || || ||| ||| || || ||||||||||||| || || Sbjct 4192 GCTCATGGCTCTGGCCTACCACGTGAGCTACGGCCTGCCCATCATCGTGACGCGGGGGAA 4133 Query 173422 CAATGTGTATGGCCCGCATCAGTTCCCCGAAAAAATGATCCCAAAATTTATTCTTCGCGC 173481 ||| ||||| ||||| ||||| ||||| || || | || || ||| | | | ||| Sbjct 4132 CAACGTGTACGGCCCCGGCCAGTTTCCCGAGAAGCTGGTGCCCAAGTTTCTGATGCTCGC 4073 Query 173482 AACCCGTGGCCTGGACCTCCCCATCCACGGGGACGGCGGGGCTTTGCGGTCGTATTTGTA 173541 || | | || ||||||||| |||| ||||| || || || || | || Sbjct 4072 CCAGCGCGACGAGGCGCTCCCCATCTACGGAGACGGTCTCGCGCGCCGCTCCTACCTCTA 4013 Query 173542 TGTTGATGACGTGGCAGAGGCTTAC 173566 || || |||||||| ||||| ||| Sbjct 4012 CGTCGAGGACGTGGCCGAGGCCTAC 3988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921557126093520