Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Helicosporidium_20sp._20ATCC_2050920_20[genbank_20GCA_5F000690575.1_
202014-05-13] 5,666 sequences; 12,373,820 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq60 86.0 7e-12
>seq60
Length=8765
Score = 86.0 bits (94), Expect = 7e-12
Identities = 143/204 (70%), Gaps = 6/204 (3%)
Strand=Plus/Minus
Query 119495 GGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCC 119554
|||||| || || || || ||||| |||||||||||||| || ||| || ||
Sbjct 2752 GGCAAAGTCGGTGTGCAGGCCCTCATCACGAGAGATGAGCTCGTTGGAAAAGGTGAGGCC 2693
Query 119555 AGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGAT 119614
|||||||| || | ||||| | ||| |||||| || || || || ||||| ||
Sbjct 2692 GGGCATGAGACCGCGCTTCTTGACCCAGTAGATGGAGCAGAAGCTGCCGCTGAAGAAAAT 2633
Query 119615 GCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGT---CGAGACTTGTCGAA 119671
||||||||| || || || || | || ||||| || |||| | |||| | || ||
Sbjct 2632 GCCCTCCACGCACGCAAACGCCACCAGGCGCTCCGC-AAAGCTCTCCGAGCC--GTTGAT 2576
Query 119672 CCACTTGAGAGCCCAGTTGGCCTT 119695
||| |||||||||| ||||||
Sbjct 2575 CCAGCGCAGAGCCCAGTCGGCCTT 2552
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588934285774800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |