Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicosporidium_20sp._20ATCC_2050920_20[genbank_20GCA_5F000690575.1_ 202014-05-13] 5,666 sequences; 12,373,820 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq60 86.0 7e-12 >seq60 Length=8765 Score = 86.0 bits (94), Expect = 7e-12 Identities = 143/204 (70%), Gaps = 6/204 (3%) Strand=Plus/Minus Query 119495 GGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCC 119554 |||||| || || || || ||||| |||||||||||||| || ||| || || Sbjct 2752 GGCAAAGTCGGTGTGCAGGCCCTCATCACGAGAGATGAGCTCGTTGGAAAAGGTGAGGCC 2693 Query 119555 AGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGAT 119614 |||||||| || | ||||| | ||| |||||| || || || || ||||| || Sbjct 2692 GGGCATGAGACCGCGCTTCTTGACCCAGTAGATGGAGCAGAAGCTGCCGCTGAAGAAAAT 2633 Query 119615 GCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGT---CGAGACTTGTCGAA 119671 ||||||||| || || || || | || ||||| || |||| | |||| | || || Sbjct 2632 GCCCTCCACGCACGCAAACGCCACCAGGCGCTCCGC-AAAGCTCTCCGAGCC--GTTGAT 2576 Query 119672 CCACTTGAGAGCCCAGTTGGCCTT 119695 ||| |||||||||| |||||| Sbjct 2575 CCAGCGCAGAGCCCAGTCGGCCTT 2552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588934285774800