Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Helicosporidium_20sp._20ATCC_2050920_20[genbank_20GCA_5F000690575.1_
202014-05-13] 5,666 sequences; 12,373,820 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq2724 93.3 3e-14
>seq2724
Length=1646
Score = 93.3 bits (102), Expect = 3e-14
Identities = 139/195 (71%), Gaps = 8/195 (4%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| ||||| || || | || |||| |||||||| || || || ||
Sbjct 1345 TCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTCCAGCTGCTTGCCCGCGAAA 1404
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || |||||||| | || | ||||||||||| ||||| |||||
Sbjct 1405 ATCAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGAC---- 1460
Query 34911 GCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966
| | ||||| | ||| | ||| || |||| ||| ||||| || ||||| || |||||
Sbjct 1461 GTTCTCGATGGTGTCCGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTCAGCGTCTT 1520
Query 34967 CACAAAGATCTGCAT 34981
|| |||||||||||
Sbjct 1521 GACGAAGATCTGCAT 1535
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324611182629648
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |