Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicosporidium_20sp._20ATCC_2050920_20[genbank_20GCA_5F000690575.1_ 202014-05-13] 5,666 sequences; 12,373,820 total letters Query= NC_016447.1 Length=219474 Score E Sequences producing significant alignments: (Bits) Value seq1417 95.1 2e-14 >seq1417 Length=2795 Score = 95.1 bits (104), Expect = 2e-14 Identities = 97/123 (79%), Gaps = 4/123 (3%) Strand=Plus/Minus Query 72852 ACCAGCGTAGAATAGCAGAGGTTGTGGGCCATGATGATGGACGGGTACAGGCTGGCAAAG 72911 ||||| || | |||||||||||||||||||| ||||||||||||||||| |||||| Sbjct 2696 ACCAGGGTGGTGTAGCAGAGGTTGTGGGCCATCATGATGGACGGGTACAGCGAAGCAAAG 2637 Query 72912 TCAAACACCAGCACCGGGTCGT--TGTAGTACCCCGTCTCCGGCTCGAACACGGTGGCGC 72969 || | | ||| |||| ||| |||||| || | || ||||||| ||||||||||| Sbjct 2636 TCCAGC-GTGGCAACGGG-CGTGGCGTAGTAGCCGGCCTTGGGCTCGAGCACGGTGGCGC 2579 Query 72970 CCT 72972 ||| Sbjct 2578 CCT 2576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 702139067478240