Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Helicosporidium_20sp._20ATCC_2050920_20[genbank_20GCA_5F000690575.1_
202014-05-13] 5,666 sequences; 12,373,820 total letters
Query= NC_022059.1
Length=77367
Score E
Sequences producing significant alignments: (Bits) Value
seq152 118 5e-22
>seq152
Length=7042
Score = 118 bits (130), Expect = 5e-22
Identities = 256/377 (68%), Gaps = 7/377 (2%)
Strand=Plus/Plus
Query 67589 CTGGACGCCGCTCTCGGCATCGGGGGGTATCCGAGGGGCCGGGTAGTGGAGATCTACGGT 67648
||||| || ||||| || || || || || |||||| | ||||||||||||||
Sbjct 4515 CTGGATGCGGCTCTGGGG---GGCGGCTACCCCGTGGGCCGCATCGTGGAGATCTACGGC 4571
Query 67649 CCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACGCGGTGGCCAATGCCCAGAAGGCC 67708
|| ||||| |||||| | ||| || || ||||| ||||| | | |||| |
Sbjct 4572 CCCGAGTCGAGCGGGAAGACGACGCTGGCGCTGCACGCCATGGCCGAGGTGCAGAGACGC 4631
Query 67709 GGTGGCAACGCCGCCTACATCGACGCCGAACATTCTCTCGACCCTGAGTACGCCGCGGCG 67768
|| ||||| || | ||||||||||| || | ||||||| | | || |||| ||
Sbjct 4632 GGAGGCAAGTGCGTTTTGATCGACGCCGAGCACGCGTTCGACCCGGTATTCG-CGCGTCG 4690
Query 67769 CTCGGGG-TGGATGTCGACAATCTCGTGGTTGTG-CAGCCAGACACTGGCGAGCAGGCCC 67826
| ||||| |||| || ||| ||| | || | ||||| ||| |||||| ||| |
Sbjct 4691 CGCGGGGCTGGACGTGGACGCGCTC-TACCTGAGCCAGCCCGACTGCGGCGAGGCGGCGC 4749
Query 67827 TGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAGGTTTCCATCATCGTTGTGGACTCTG 67886
||||||||| ||| || || || || | || ||| ||| || ||||| |
Sbjct 4750 TGGAGATCGCGGACAACCTGATCCGCTCCGGGGGCGTGGACATGGTCGCCGTCGACTCGG 4809
Query 67887 TGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACATCGGGGACTCGCACGTCGGCC 67946
||||||| ||||| ||||| || ||| | || || || |||||| | ||| || |||
Sbjct 4810 TGGCGGCGCTGGTCCCGCGAGCCGAGATAGAGGGCGAGATCGGGCAGCTGCAGGTGGGCG 4869
Query 67947 TGCATGCCCGCCTGATG 67963
|| || |||||||||
Sbjct 4870 CCCAGGCGCGCCTGATG 4886
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 247432512522528
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |