Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Helicosporidium_20sp._20ATCC_2050920_20[genbank_20GCA_5F000690575.1_
202014-05-13] 5,666 sequences; 12,373,820 total letters
Query= NC_022981.1
Length=76323
Score E
Sequences producing significant alignments: (Bits) Value
seq152 129 3e-25
>seq152
Length=7042
Score = 129 bits (142), Expect = 3e-25
Identities = 256/376 (68%), Gaps = 5/376 (1%)
Strand=Plus/Plus
Query 66365 CTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAATCTACGGC 66424
||||| | |||||||| || || ||||| |||||| | ||||| |||||||||
Sbjct 4515 CTGGATGCGGCTCTGGGG---GGCGGCTACCCCGTGGGCCGCATCGTGGAGATCTACGGC 4571
Query 66425 CCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCCAATGCGCAGAAGGCC 66484
|| || || |||||| | || ||| || ||||| ||||| | | ||||| |
Sbjct 4572 CCCGAGTCGAGCGGGAAGACGACGCTGGCGCTGCACGCCATGGCCGAGGTGCAGAGACGC 4631
Query 66485 GGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCG 66544
|| ||||| || | |||||||| |||||| | | ||||| | | || | | ||
Sbjct 4632 GGAGGCAAGTGCGTTTTGATCGACGCCGAGCACGCGTTCGACCCGGTATTCG-CGCGTCG 4690
Query 66545 CTCGGTG-TGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCT 66603
| ||| | ||||| | ||| ||| || ||||| ||| |||||| ||| ||
Sbjct 4691 CGCGGGGCTGGACGTGGACGCGCTCTACCTGAGCCAGCCCGACTGCGGCGAGGCGGCGCT 4750
Query 66604 GGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGT 66663
|||||||| ||| ||| || || || | || ||| |||| ||| ||||| ||
Sbjct 4751 GGAGATCGCGGACAACCTGATCCGCTCCGGGGGCGTGGACATGGTCGCCGTCGACTCGGT 4810
Query 66664 GGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCT 66723
|||||| ||||| ||||| |||||| | || ||||| |||||| | || || |||
Sbjct 4811 GGCGGCGCTGGTCCCGCGAGCCGAGATAGAGGGCGAGATCGGGCAGCTGCAGGTGGGCGC 4870
Query 66724 GCACGCGCGCCTCATG 66739
|| |||||||| |||
Sbjct 4871 CCAGGCGCGCCTGATG 4886
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 244091943219384
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |