Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Helicosporidium_20sp._20ATCC_2050920_20[genbank_20GCA_5F000690575.1_
202014-05-13] 5,666 sequences; 12,373,820 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq2296 316 2e-81
>seq2296
Length=1937
Score = 316 bits (350), Expect = 2e-81
Identities = 472/657 (72%), Gaps = 16/657 (2%)
Strand=Plus/Plus
Query 146917 TTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCC 146976
|| |||||||| ||||||||| ||||||||| ||||| || ||| ||| | ||| |||
Sbjct 102 TTGAGGGGCTCGACGTGGTTGGCGTAGACGTGGGCGTCGCCGAGGACGTGAAAAAACTCC 161
Query 146977 CCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATG 147036
|| || |||||| || ||||| | |||| |||||| || | |||| || |||
Sbjct 162 CCTGGGCGGAGGCCGCAGACCTGGGCGAGCATGCGGGTGAGGAGGGCGTAGGAAGCGATG 221
Query 147037 TTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCC 147096
|||||||| || |||||||| | ||| |||| | |||||||| ||| ||||||||
Sbjct 222 TTGAAGGGCACGCCCAGGCCGAGGTCTGCCGAGCGCTGGTACATGGAGCAGGAGAGCTCT 281
Query 147097 CCGTCGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCA-TGGCGGGCAG 147155
|| ||||||| | |||||| || | |||||| |||||||| |||| | ||||| |
Sbjct 282 CCCCGGGCCACGAAGAACTGGGCGAGCACGTGGCAGGGCGGCAGGGCCATTTGCGGG-AT 340
Query 147156 GTCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTC-GGGGTTCCTCTTAATCT 147214
| | | |||||||||||| ||| || ||| |||| | || | |||||| |||| ||
Sbjct 341 GGCGGTGGGGTTCCAGGCGCAGAGCAGCAGGCGCC-GGTCGCAGGGGTTGGTCTTGATGC 399
Query 147215 CTTCGA-TAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCA-GTC 147272
| || || | | | ||||||||||||||| || | ||| | | | ||| |||
Sbjct 400 GGTGGACTAGGTCGGC-AACCTGGTCCACGCCCTGCCCGGCATAG-TCGGCGTGCATGTC 457
Query 147273 CACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGG 147332
|||| ||| |||||||| | |||||| ||||||||||| ||||||| ||||||
Sbjct 458 GGCGTAGGCGGCGCCAAAGTGGCGCCACTGAAAGCCGTACACGGGCCCCAAGTCGCCCTC 517
Query 147333 CTTTCTGTGCGAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGAT 147392
|| | |||| | |||| | | ||||| || |||| |||| | ||||||| ||
Sbjct 518 CTCGCGGTGCTGCAGGCCCAGCGAGTCCAGAAAAGCGCGGGATCCGTTGCCGTCCCAAAT 577
Query 147393 GCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAG 147452
|||||| |||||||| ||| || | ||| ||||||||| | ||||||||||||
Sbjct 578 GCCCACGCCCTTGGCCTTGAGTCTGTTGGCGTCGGTGGAGCCCGCCAGGAACCAGAGCAG 637
Query 147453 CTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGAACTGGTCCCT 147512
||| |||| || || | ||| || || | ||||||||| ||||| || || || ||
Sbjct 638 CTCTTCCACCACGCCGCGCCAGAACACGCGCTTGGTGGTAAGCAGCGGAAAGCTGTGCCG 697
Query 147513 CAG--CGAATACCTCGCCTGGTCC--CCAAACACAGACAGCGTGCCCGTGCCCGTCC 147565
||| ||| ||| |||| | |||||||| | |||||| |||||||| ||||
Sbjct 698 CAGGTTGAA----GCGCATGGTGCGACCAAACACCGCCAGCGTTCCCGTGCCGGTCC 750
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583446674462400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |