Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Helicosporidium_20sp._20ATCC_2050920_20[genbank_20GCA_5F000690575.1_
202014-05-13] 5,666 sequences; 12,373,820 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq114 251 1e-60
seq60 217 2e-50
seq74 174 2e-37
seq2188 161 1e-33
seq2727 156 6e-32
seq2314 150 3e-30
seq1765 127 3e-23
seq224 109 8e-18
seq771 95.1 2e-13
seq3218 93.3 6e-13
seq2089 93.3 6e-13
seq1714 86.0 9e-11
>seq114
Length=7431
Score = 251 bits (278), Expect = 1e-60
Identities = 557/832 (67%), Gaps = 38/832 (5%)
Strand=Plus/Minus
Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847
||||||||||||||||||||||||||||| |||||||| || |||||||| ||| |
Sbjct 1322 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCGGTGTACCTGGAGCCCTGGCACGCGGACGTG 1263
Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907
|| ||||||||||||| |||||||||||||| ||||| || | |||| |||
Sbjct 1262 ATGGACTGGCTGGACCTGCGCAAGAACCACGGCAA-GGAGGAGG-----CTCGCGCCCGC 1209
Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGC 261967
|| || || ||||| ||||||| ||||||||||||| ||| | | | | | | |
Sbjct 1208 GACCTGTTCTACGGGCTGTGGATCCCCGACCTGTTTATGAAGCGCGTCGAGGCGGACGGG 1149
Query 261968 GACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCC 262027
| ||| || || ||||| ||||||||| |||||| || | ||| | |
Sbjct 1148 CAGTGGAGCCTGTTCTGCCCCAACGAGGCGCCGGGCCTGGCGGACGTGTGGGGCCCCGAG 1089
Query 262028 TTTGACGCCCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNCGCGGACCGTCG-TGCCCGC 262086
||||| | ||||| | | |||| | | || ||| |||
Sbjct 1088 TTTGAGTCGCTCTACGCGCGGTACGAGCGCGAGGGCCGCGCGCGCA-AGACGATGCGCGC 1030
Query 262087 ACGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGT 262146
| ||| | |||| |||||| | | ||| || | ||||| ||||||||||||||| |
Sbjct 1029 GCAGCAGCTGTGGTTCGCCATTTTGGAGGCGCAGACGGAGACGGGCACGCCCTACATGCT 970
Query 262147 CTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCACGACAGAG-G 262205
|||||||||||| |||| | ||||||||||||||||||||||| | | || |
Sbjct 969 GTACAAGGACGCCTGCAACGCCAAGAGCAACCAGCAGAACCTGGGCACGATCA-AGTGCA 911
Query 262206 CCAACCTGTGCACCGAGATCGTCCAGTTTTCGTCGCCCACCGAGGCAAGTGTGTGCAACC 262265
|||||||||||||||||||||| ||| || | ||| |||| | ||||||||||
Sbjct 910 GCAACCTGTGCACCGAGATCGTCGAGTACACGGCCCCCGACGAGACGGCCGTGTGCAACC 851
Query 262266 T---CTCGAGCGTGGCCCTGCCCAAGTTTGTCATCCCCGACCCGCGCGGCGAGGATCGCA 262322
| ||||| | || ||||| || |||| || || | || |||||| ||||
Sbjct 850 TCGCCTCGA---TCGCGCTGCCGCGCTTCGTCAAGGACGGCCAGGGCCGCGAGGGCCGCA 794
Query 262323 GTGGCCCATTGGATTCGCGCTACGACGATGCCGGCGTGGCCCTGGGCATGGTCTTTGACC 262382
|| | | || | || |||| |||| || | || | | ||||||||
Sbjct 793 --AGCTCGTGGGCT----CCTTGGACG----CGGCCACGCGC--CGCTTCGACTTTGACC 746
Query 262383 --ATGGCGCCCTCCATGAAGTTGTCCAGGCGATGGCGCGCAACCTCAATCGTGTGATTGA 262440
||||| || || || || | | |||||||||| || || | || ||
Sbjct 745 GGCTGGCG--------GAGGTCGTGTCGGTGGCGACGCGCAACCTGAACCGCATCATCGA 694
Query 262441 CATTAATCACTACCCGGTGCCCGAGGCCCGCCACTCGAATCTGCGCCATCGACCGATGGG 262500
| | || |||||||| || |||| |||| | | || || || || || || || ||
Sbjct 693 CGTCAACCACTACCCCGTCCCCGCGGCCGAGCGCAGCAACCTCCGGCACCGCCCCATCGG 634
Query 262501 CGTCGGCGTGCAGGGCCTCGCCGACGTGTTTGCCCTGATGGACCTGCCGTGGGAGAGCGC 262560
| | |||||||||||||| ||||||| || |||| ||| | |||| | || | |
Sbjct 633 CCTGGGCGTGCAGGGCCTGGCCGACGCCTTCATCCTGCTGGGCATGCCCTTTGACGGGCC 574
Query 262561 CGGCGCACGACGTCTCAACCGCGCCATCTTTGAGACGGTCTACCATGCGGCG 262612
|| || | |||||||||| |||||| ||||| |||||| | || |||
Sbjct 573 CGAGGCCGCGCAGCTCAACCGCGACATCTTCGAGACCGTCTACTACGCCGCG 522
Score = 199 bits (220), Expect = 6e-45
Identities = 293/405 (72%), Gaps = 21/405 (5%)
Strand=Plus/Minus
Query 262870 AGCGGCCGCTGGGACTGGGACGCACTGCGGGCGTCGGTTCGACAGCATGGCCTGCGCAAC 262929
||||| || ||||||||||| || ||||| ||| | || || |||| || |||||||||
Sbjct 410 AGCGGGCGGTGGGACTGGGAGGCCCTGCGCGCGACCGTGCGCGAGCACGGGCTGCGCAAC 351
Query 262930 TCGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAG 262989
||| |||| ||||||| |||||||||||| | || |||||| ||||||||| ||||
Sbjct 350 TCGCTGCTGGTGGCGCCCATGCCCACGGCGAGCACCAGCCAGATCTTGGGCAACAACGAG 291
Query 262990 GCGTTCGAGGTCATCACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACC 263049
|||||| | ||| |||||||||||| ||||||||||||||||||||| || |||
Sbjct 290 TGCTTCGAGCCCTACACCAGCAACATCTACGTGCGCCGCGTGCTCTCGGGCGAGTTCACC 231
Query 263050 GTGGTCAACCGCCACCTGGT---CAAGCGCATGGTGGCGCGCGGC-CTGTGGACGCCCGA 263105
|||||||||| ||||||| | | | | || | || | ||| ||| ||||| ||||
Sbjct 230 GTGGTCAACCACCACCTGCTGCACGACCTCACG--CGCCTGGGGCTCTG-GGACG-CCGA 175
Query 263106 CTTTCGCGACCG-GCTCATTGCGGCACAG-GGCTCGGTGCAGGGCTTTGACGACGAGGAG 263163
| || || || ||| | || ||| | || |||||| || | | |||
Sbjct 174 C-CTCAAGAACGAGCTGGTGGC-CCACGGCGGGTCGGTGGCGGCCCTCGAC--------- 126
Query 263164 GTGCCGCCCGATCTCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAACCGGGTGACC 263223
||||| || ||||||| || | |||||| ||||||||| | | || |||
Sbjct 125 GTGCCCGAGGACCTCAAGGGCCTGTACAAGACGGTGTGGGAGATCAAGCAGCGCGTGCTG 66
Query 263224 ATTGATATGGCGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAG 263268
| || ||||| |||||||||| |||| ||||||||||||||
Sbjct 65 GTCGACATGGCCGCCGACCGCGGCGCCTACATCGACCAGAGCCAG 21
Score = 185 bits (204), Expect = 1e-40
Identities = 217/290 (75%), Gaps = 10/290 (3%)
Strand=Plus/Minus
Query 259901 CAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAG 259960
|||| | |||||| ||| |||| |||||||| || || ||||| || |||||||||
Sbjct 1604 CAGCGTTGGTTCACGCACGCGTCGCCGACGCTCTTCAACGCGGGCACCCCCCGCCCGCAG 1545
Query 259961 AATTCGTCG-TGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACAC 260019
| | | |||||| || ||| |||||||| ||| |||||||||||||| |||||
Sbjct 1544 C-TGAGCAGCTGCTTTTTGGTGGCCATGAAGGGCGACAGCATCGAGGGCATCTACGACAC 1486
Query 260020 GCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACA--- 260076
||||||| |||||||| |||| |||| || ||||||||||| || |||||
Sbjct 1485 GCTCAAGGAGTGCGCGGCCATCAGCAAGAGCGCGGGCGGCATCGG----GCTGCACATGC 1430
Query 260077 -CAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTG 260135
| | | |||||| |||| | ||| | ||||||||||||| | ||||||| | |
Sbjct 1429 ACGACATCCGCGCCACGGGGTCGTACATCCGGGGCACCAACGGCACGAGCAACGGCGTGG 1370
Query 260136 TGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAGTGC 260185
|||||||||| ||||| || ||||||||||| || ||||| |||||| ||
Sbjct 1369 TGCCCATGCTGCGCGTGTTCAACGACACGGCTCGGTACGTGGACCAGGGC 1320
>seq60
Length=8765
Score = 217 bits (240), Expect = 2e-50
Identities = 248/325 (76%), Gaps = 6/325 (2%)
Strand=Plus/Plus
Query 1456452 TGCACTGTGACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGCCGTCGACCGA-C 1456510
||||| ||||||||||| ||||||||| | ||||||| || || | | ||| |
Sbjct 2736 TGCACACCGACTTTGCCTGCCTGCTCTACTCCATGCTCGAGCACCCGCTCGCCATCGAGC 2795
Query 1456511 GTGCCCAAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCG 1456570
|| | || ||| || | | ||||||||| || |||||||| ||||||||| |||| |
Sbjct 2796 GT-CTGAACCAGCTCGTGGGCGAGGCCGTGGAAATCGAGAAGGAGTTTGTCTGCGATGCC 2854
Query 1456571 CTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTG 1456630
|||||||||| |||||||||||||||| || ||| ||| |||||||||||| | ||||
Sbjct 2855 CTGCCGGTGGATCTCATCGGCATGAACGGCA-AGCTGATGAGCCAGTACATTG-AGTTTG 2912
Query 1456631 TCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCG 1456690
| |||||| ||||||| || || || |||| |||| |||| | |||| |||
Sbjct 2913 TGAGCGACCGGCTGCTCGTCGCCCT-GGGTGCGCCCAAGCTCTACAACGCCACCAATCCG 2971
Query 1456691 TTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT- 1456749
||| ||||||||| | |||||||| ||||||||||||||||||||||| |||||
Sbjct 2972 TTCGACTGGATGGAGCTCATCTCGCTGCAGGGCAAGACCAACTTTTTCGAGAAGCGCGTC 3031
Query 1456750 GGCGAGTACGCCAAGGCCGGCGTCA 1456774
|| || ||| |||||||||||||
Sbjct 3032 GGAGACTACCAAAAGGCCGGCGTCA 3056
Score = 158 bits (174), Expect = 2e-32
Identities = 184/247 (74%), Gaps = 1/247 (0%)
Strand=Plus/Plus
Query 1455819 GCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCACTGGGTGTCGCTGAGCGACGACGAG 1455878
||||||||||| || || || ||||| | |||||| | ||| | | | |||||
Sbjct 2125 GCCGAGGAGGTGGATCTGGGTAGCGACATGCAGGACTGGGAGAAGCTCAATGGCAACGAG 2184
Query 1455879 CGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGA 1455938
||||| |||||| ||| ||||||| || ||| || | | |||||||||||| ||
Sbjct 2185 CGCCACTTCATCTCCCACATCCTCGCTTTCTTT-GCTGGCTCCGATGGCATCGTCCTGGA 2243
Query 1455939 GAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGG 1455998
|||||||| || || |||||||||||||| | || ||||| ||| ||||||||
Sbjct 2244 GAACCTGGGCGTGCGTTTTATGAAAGAGGTGACCGTTCCCGAGGCCCGTGCCTTTTACGG 2303
Query 1455999 GTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTA 1456058
||||||||| |||||||| |||||||||||||| | ||| || ||| | || |||||
Sbjct 2304 GTTCCAGATTGCCATCGAGAACATCCACTCTGAGATGTACAGTCTGCTGTTGGAGACCTA 2363
Query 1456059 CGTCAAG 1456065
| |||||
Sbjct 2364 CATCAAG 2370
Score = 145 bits (160), Expect = 1e-28
Identities = 176/236 (75%), Gaps = 9/236 (4%)
Strand=Plus/Plus
Query 1456076 AGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACT 1456135
|||||||| ||||||| || |||| ||| ||||| || ||||| ||| ||||||||||
Sbjct 2502 AGAAGGACTACCTCTTCCGTGCCACCGAGACGGTACCCGTGGTGAAGAAGAAGGCCGACT 2561
Query 1456136 GGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACA-CTTTGCCGAGCGGCTCGTCGGCT 1456194
|||| || ||||||||| ||| || | |||||| ||||| || || | |
Sbjct 2562 GGGCTCTGCGCTGGATCAAC------GGCTCGGAGAGCTTTGCGGAGCGCCTGGTGGCGT 2615
Query 1456195 TTGCC-GCGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGA 1456253
|||| |||| |||||||| || ||| ||||| |||||| |||||| ||| ||||||
Sbjct 2616 TTGCGTGCGTGGAGGGCATTTTCTTCAGCGGCAGCTTCTGCTCCATCTACTGGGTCAAGA 2675
Query 1456254 AGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGACGA 1456309
||||||| ||||||||||| | || |||| |||||| | ||| ||| || ||
Sbjct 2676 AGCGCGGTCTCATGCCCGG-CCTCACCTTTTCCAACGAGCTCATCTCTCGTGATGA 2730
>seq74
Length=8418
Score = 174 bits (192), Expect = 2e-37
Identities = 334/486 (69%), Gaps = 11/486 (2%)
Strand=Plus/Minus
Query 1600258 CTCCATCTCTCCAAGGCGGAAGCCGCCCGAGCGCGAGCGGCCCTCGACCGGCTGCTTGGT 1600317
|||||||||||| | ||| | || || ||| | ||| ||||| || |||||| ||
Sbjct 6839 CTCCATCTCTCCGAAGCGCAGACCTCCGTCGCGGGCGCGTCCCTCCACGGGCTGCCGCGT 6780
Query 1600318 GAGCATCTGGACGGGGCCGCGTGGTCGGGCGTGAATCTTGTCGATGGCCACGTGGCGCAG 1600377
|| ||||| ||||| ||||| | ||| ||||| |||||||| ||| ||| |||
Sbjct 6779 CAGGATCTGCACGGGCCCGCGAGCTCGAGCGTGGATCTTGTCATCCACCATGTGCTTCAG 6720
Query 1600378 GGCCTGGTAGTAGACCGGCGCCGTAAAGATCAACGCCTCCATGGGCTCGCCGGTGTGCGG 1600437
|||||||||| ||| ||||| |||| | | | | ||| ||||
Sbjct 6719 CCGCTGGTAGTAGGTCGGGTTGAGGAAGATGGGCGCCACGAGGCGGCGGCCCGTGTAGCC 6660
Query 1600438 GTGGTAGAGCACCTCCTTGCCGTAGCGCTCGCATCCGT-GGCGAGCCAACTCGGCGGCGA 1600496
|| ||| | |||||| ||| ||||| ||||| |||| || | | | |||| ||
Sbjct 6659 GTTGTACATGACCTCCCATCCGCGGCGCTGATATCCGCAGGCGTGC-AGCGCCGCGGAGA 6601
Query 1600497 CATCGTCGACGGTGACGCCGCCAAAGGGCGTGCCGTCGCCCACATAGCCCTCGCGGCAGG 1600556
| ||| ||||| ||| | ||||||||| |||| ||| | || || || ||
Sbjct 6600 TGTTGTCCACGGTCACGTCCGTGAAGGGCGTGGCGTCTCCCTCTCGACCGACGAGGGCGG 6541
Query 1600557 CCACCTTGCCCAGGAGGGCCTCCATCATCTTGCCCATGGTCATGCGCGACGGGATGGCGT 1600616
| ||||||| || ||| ||||||| || | ||| |||||||||||||| ||||||||||
Sbjct 6540 CGACCTTGCTCATGAGCGCCTCCACCAAATGGCCGATGGTCATGCGCGAGGGGATGGCGT 6481
Query 1600617 GCGGGTTGATCACAATGTCGGGCGTGGCACCGCCGCGAGGCGACCAGGGCATGTCCTC-- 1600674
| |||||||| | | ||||||| | || | ||| | || | |||||||||||
Sbjct 6480 GGGGGTTGATGATGAGGTCGGGCACGATGCC-CTGCGCG--GAAAAAGGCATGTCCTCCT 6424
Query 1600675 -GGTGGAGCGCACGCTGCCCACGGTGCCCTTTTGGCCGTGGCGCGACGACAGTTTGTCGC 1600733
|||| || | |||| | |||||||||||| ||||| | ||| | | |||||||
Sbjct 6423 GGGTGTAG---GTGATGCCGATGGTGCCCTTTTGTCCGTGTCTCGAGGCAAACTTGTCGC 6367
Query 1600734 CCACCT 1600739
| ||||
Sbjct 6366 CGACCT 6361
Score = 105 bits (116), Expect = 1e-16
Identities = 147/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 1602090 CACGTGCGCCCCAAGGGCCAGGTTGCTCACGAGGCCGCACGAGCCGCCCTCGGGCGTCTC 1602149
||||| || | || |||||||| | ||||| ||||| | ||||||||||||||
Sbjct 5168 CACGTACGTCATGAGCGCCAGGTTCTTGACGAGCCCGCAGGCCTGTCCCTCGGGCGTCTC 5109
Query 1602150 CACGGGACACAAGAGACCCGCCACGCTGTCGCGCAGTTGGCGCACCTTGGGCAGTTTGCC 1602209
|||| |||| | ||| | | ||| | |||| |||||| ||||| ||| |||||
Sbjct 5108 GGCGGGGCACACCATGCCCCACTGGGTGTTGTGCAGCTGGCGCGGCTTGGCCAGCTTGCC 5049
Query 1602210 CTCCTTGTTGATGGGCGTGTTGACGCGGCGCATGTTGGACAGGGCCGACGTGACGGTCAT 1602269
||| |||||||| ||||| |||||||| || ||||| | |||| || ||||
Sbjct 5048 CTCGCGCCCGATGGGCGAGTTGATGCGGCGCAGGTGCGACAGCGTGGACGCGAACGTCAG 4989
Query 1602270 GCGATTGTGCATCTGCGCGACGCCCG 1602295
||| || ||| ||||| |||||||
Sbjct 4988 GCGGTTCAGCACCTGCGACACGCCCG 4963
>seq2188
Length=2021
Score = 161 bits (178), Expect = 1e-33
Identities = 282/403 (70%), Gaps = 22/403 (5%)
Strand=Plus/Plus
Query 1816027 CTCAATGTAGGTGGCGTCGGCGCCGTCGCCGCCATATGCAAACTGGACAATGTCGCCGTT 1816086
||| ||| |||| | || |||||| |||| || ||||| || || ||||| |
Sbjct 36 CTCTATGGCGGTGCCTTCCATGCCGTCCTCGCCGTAGAGGAACTGCACGATCTCGCCCAT 95
Query 1816087 GGCGTTGCGCACGAGGCCGCCG---CGCTTGATCTGCAGGCTCTCCATCGACTTGATGCA 1816143
||||||||||||| |||| || ||| || ||| |||||| | |||||
Sbjct 96 GGCGTTGCGCACGGTGCCGTCGTAGCGCACCATG---AGGTCCTCCATGGCCTTGACCAG 152
Query 1816144 CCGGCGCTGGATGTAGCCACGTCCGGCGGTCTTGACGGCCGTGTCGACCAGGCCCTCGCG 1816203
||||||||||||||||| | ||| ||||| || |||||||||| || ||||||||
Sbjct 153 GCGGCGCTGGATGTAGCCGGTGCTGGCCGTCTTCACCGCCGTGTCGATGAGCCCCTCGCG 212
Query 1816204 GCCGCCGATCATGTGCAAAAACATCTCGCGCGAGTTGAGGCCGCGCTCGTACGAGTTGCG 1816263
|||||| || ||| || || | ||| | | | || |||||| ||| |||||
Sbjct 213 GCCGCCCATGGCGTGGAAGAAAAACTCCTGGGGGGACAGCCCGCGCAGGTAGGAGTTTTC 272
Query 1816264 CACAAAGCCGCGGCTCTCGGGCGGCGGCACGGCCTCGGCGTGCCG--GTAGCAGCCCAGT 1816321
||| || ||||||||||||||| || | | | || | ||| | || || || ||
Sbjct 273 CACGAACCCGCGGCTCTCGGGC-CCG--AAGTCGTC--CTTGCTGAAGT-GCGGCAGCGT 326
Query 1816322 G---TGCGCGAACCCGACTCGGAGTGGATGCGCTGGCCCTCATTGCTCTGCTGGCCCACG 1816378
| ||||||||||||| || | ||||||| |||||| | |||||||||| |||
Sbjct 327 GCGCTGCGCGAACCCGA-----AGGGAATGCGCTTGCCCTCGACGTTCTGCTGGCCGACG 381
Query 1816379 CAGCCGCACATCTGGGTGATGTTAAAGACGCTACCCTTGGAGC 1816421
||| || |||||||| |||||| | || | ||||||||||
Sbjct 382 CAGGCGATCATCTGGGAGATGTTGATGAAGGATCCCTTGGAGC 424
Score = 125 bits (138), Expect = 1e-22
Identities = 141/186 (76%), Gaps = 2/186 (1%)
Strand=Plus/Plus
Query 1818078 GGCGTCACGCGCTCGGGAAAGGTGAGCGTCTTGACGAT-CTCATAGGGCACGCCCACCTC 1818136
||||| || |||||||||||| |||||| |||| ||| |||||||||||| |||
Sbjct 1549 GGCGTGACCGTCTCGGGAAAGGTCAGCGTCAGCGCGATGCTC-CAGGGCACGCCCAGCTC 1607
Query 1818137 GTCAATGTCAATCTCGGGGTCGGGGCTGATGACGGCGCGCGCGGTAAAGTTGACGCGCTT 1818196
||| | | | | ||||||| ||||||| | ||| |||| ||||| ||||||||
Sbjct 1608 GTCCAGCGCCAGGTTGGGGTCGCCCGTGATGACCGTGCGGGCGGAAAAGTCCACGCGCTT 1667
Query 1818197 GCCCATGCAATTGCCGCGGATCCTGCCCTCCTTGCCCTTGAACCGCTCCACGAGGCCCTT 1818256
||||||| |||||||||| | ||| |||||||||||| |||||| ||| || |||
Sbjct 1668 GCCCATGAGGTTGCCGCGGACGCGGCCGCCCTTGCCCTTGAGCCGCTCGGCGATGCTCTT 1727
Query 1818257 GGTGGG 1818262
| ||||
Sbjct 1728 GATGGG 1733
Score = 89.7 bits (98), Expect = 7e-12
Identities = 231/352 (66%), Gaps = 9/352 (3%)
Strand=Plus/Plus
Query 1817421 CATGAGCACGCCGCGGTCCATAAATGTGTCGTTGGTCGTGAGGAAGCCACAACCGACGAG 1817480
|||||||| | |||| |||| ||| | |||| | |||| || || ||||| | ||
Sbjct 1044 CATGAGCAAGTCGCGCTCCAGAAACGCGTCGCGCGAGGTGAAGAGGCGGCAACCCAGCAG 1103
Query 1817481 GGCGTCCATGACCAGGCCGATGATGGGCTTGTTGGCCTGCGGCGACACGGTCTTGAGGGC 1817540
||||| || | ||| || | || ||||||||| || |||| | ||| ||
Sbjct 1104 CGCGTCTTGCACGATGCCCATCACCGGACGGTTGGCCTGAGGGCTCACGATGTTGGCGGG 1163
Query 1817541 CACGTTCATGGTGTGCGTCACCTCGGCGCGCGCGT-----CTCAGACTGGGGCACATGGA 1817595
||| |||| | | | |||||||||||| || ||| | || | ||||
Sbjct 1164 GACGGCCATGATCTCCCGGACCTCGGCGCGCACGGGATGGCTCTGCACGGCGTGCATG-- 1221
Query 1817596 GGTTCATCTCGTCGCCGTCAAAGTCGGCATTGTAGGTGCCCGTGACGGCCAGGTTGAACC 1817655
||||||||||||||||| |||||||| ||||||| || || | |||||||| ||
Sbjct 1222 --TTCATCTCGTCGCCGTCGAAGTCGGCGTTGTAGGGCGAGGTCACCGACAGGTTGAGCC 1279
Query 1817656 GCATGGTACGGCCGGGCATGGGCACCACCTTGTGCATGAGCATGGAGCCCATGTGGAGTG 1817715
| | || | | ||||| | ||| ||| | |||||| | |||| || |
Sbjct 1280 GGAACGTGCTGTAGGGCAAGATGCGCACGCGATGCCCCATCATGGACATCTTGTGCAGCG 1339
Query 1817716 AGGGCTGCCGGTTCATCACCACGGCGTCGCCGGCGCGCAGGTGACGCTCGAC 1817767
||||||||||||| | | || ||||||| | ||||| ||||| ||
Sbjct 1340 AGGGCTGCCGGTTGAAGATGACCAGGTCGCCGTTGGTGAGGTGCCGCTCCAC 1391
>seq2727
Length=1645
Score = 156 bits (172), Expect = 6e-32
Identities = 260/367 (71%), Gaps = 8/367 (2%)
Strand=Plus/Plus
Query 332854 GGCGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGAC 332913
|||||| | ||| | | ||||| | || || || |||||||| | || |||||||||
Sbjct 1283 GGCGTCGGAGAGCCTGCCGAAGCGGACGACCGCGCAGCGGCTCTGGATGGGCTCGATGAC 1342
Query 332914 CATTGACGACG-TGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGG 332972
| ||| | | |||||||||| || || || || || || | | ||| |||||||
Sbjct 1343 C-TTGCTGCTGGTGTTGCAGGCGAGCGCGAAGCGGGTGGTGGCGCTGTGCAGCTCCATGG 1401
Query 332973 TCGACCGGAGGGCCTGTTGGGCCGCCGGCGTGA-GGCAGTCGGCCTCGTCGAGGATGATG 333031
| ||| || ||||| || || | | || | |||| ||||||||||| | |||| |
Sbjct 1402 TGCGCCGCAGAGCCTGCTGCGCGCCAGAGGTCATGGCA-TCGGCCTCGTCCAAAATGACG 1460
Query 333032 ATCTTGTGGCGCCCGTGCGGCAGATCAACCCTTTTCGAGGCGTGGTGTTTGATGATCTTG 333091
||||||||||| ||| | || ||| || | | | ||| || ||||| | |
Sbjct 1461 ATCTTGTGGCGTCCGGGGGGGAGAGTCACACGCTGCTGCGCGAATTGCTTGATCTTGCCG 1520
Query 333092 CGCACGACGTCCACGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCACGGCCTCGTCGG-- 333149
|| |||||||| | |||||||||||| |||||| || || ||||| || ||| |||
Sbjct 1521 CGGACGACGTCGATGCCGCGCTCGTCGCTCGCGTTCAGCTCCAGCACCGCGTCG-CGGTA 1579
Query 333150 CGGCCGCACCCAAGAGGACGCGCGCCAGGCACGCGATGCTCGTGGTCTTGCCCGTGCCGG 333209
| | || |||| || ||||||||||| ||||||||| ||||||||||||||||
Sbjct 1580 CTG-GGCGCCCAGCAGCGTACGCGCCAGGCATTGGATGCTCGTCGTCTTGCCCGTGCCGG 1638
Query 333210 GCGGACC 333216
|||| ||
Sbjct 1639 GCGGGCC 1645
>seq2314
Length=1923
Score = 150 bits (166), Expect = 3e-30
Identities = 163/208 (78%), Gaps = 6/208 (3%)
Strand=Plus/Minus
Query 1456569 CGCTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTT 1456628
|||| ||||||| |||||||| ||||||||| |||| |||| || ||||| | | ||
Sbjct 1581 CGCTCCCGGTGGATCTCATCGGGATGAACGCCGCCGC-CATGGGCGAGTACGTCCAGTTC 1523
Query 1456629 TGTCGCCGACCGCCTGCTCG-CGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAAC 1456687
|| |||||||||||||||| | || ||||||| || | || |||| || | |||
Sbjct 1522 -GTGGCCGACCGCCTGCTCGTCAGC-CTCGGCTACGC-GCCGCTCTACAGGGCCAAGAAC 1466
Query 1456688 CCGTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGC 1456747
|| ||| ||||||||| | ||||||||| |||||||||| ||||||||||||||||||
Sbjct 1465 CCCTTCGACTGGATGGAGCTCATCTCGCTCCAGGGCAAGACGAACTTTTTCGAGCGCCGC 1406
Query 1456748 GT-GGCGAGTACGCCAAGGCCGGCGTCA 1456774
|| || |||||| |||||||||||
Sbjct 1405 GTGGGGGAGTACCAGCGGGCCGGCGTCA 1378
>seq1765
Length=2407
Score = 127 bits (140), Expect = 3e-23
Identities = 306/452 (68%), Gaps = 36/452 (8%)
Strand=Plus/Plus
Query 2129425 GCCTTGAGCAGGATCTCGGCAAACTCGGCCTCGGGGTCCGAGTCGGCGACGATGGCGCCG 2129484
|| ||||||| ||||| ||||||| |||||||||| || | |||||||||| ||
Sbjct 1136 GCTTTGAGCATCATCTCCTCAAACTCTCCCTCGGGGTCGGACTGCACGACGATGGCCCCT 1195
Query 2129485 CCGCAGCCCACCGACG-CCGCGCCATCGGCGTCGATGACGGCCGTGCGGATCACCACCGA 2129543
|| | | |||||| || || | || | |||||| || ||||| || |
Sbjct 1196 CC----CGCGCCGACGGCCACGTGTCCCTGGTGCACGACGGCGGTTCGGATGACGATGTT 1251
Query 2129544 CAGCGAGCAGGCGCCGTCGGCCGAAAAGAATCCCAACGC-GCCCGAGTAGATCCCGCGTG 2129602
|| | | ||| ||| || || || || | ||| ||| | ||||||||| || |
Sbjct 1252 GAGGTCGAACGCGTCGTTTGCGCTGAAAAAGCCGA-CGCTGCCGGCGTAGATCCCTCGAG 1310
Query 2129603 GGCGATGCTCTTCAAGACGGTCCAAAATGTCCATGCTGCGCGCTTTGGGCGCGCCCGTCA 2129662
| | || || | ||||| ||||| || |||||| |||| ||||||||||| ||||
Sbjct 1311 GCCC--GCCCT-CGAGACGCTCCAAGATCTCCATGGAGCGCAGCTTGGGCGCGCCGGTCA 1367
Query 2129663 T---CGAGCCTGGGGGAAAAGCCGCGCGCACGAGGTC---CAGCG---CCGTCTGTTGTC 2129713
| | ||| ||| ||||| ||| |||| ||| || || |||||| | |
Sbjct 1368 TGCTCCCGCCCGGG---AAAGCGGCGGCCACGCAGTCGGCCACCGAGGCCGTCTTGAGGC 1424
Query 2129714 GGTCCAACAGGCCGTCGACGGTGGTCACCATCTGGTGCACGGCGGCATAGGTCTCGATCG 2129773
| | | ||| ||| |||| |||||| |||||||| | ||| || | |||||| |
Sbjct 1425 GCT------GTCCGCGGACCGTGGACACCATTTGGTGCACCGTGGCGTACGACTCGATGG 1478
Query 2129774 CCATCAGCCGGCCGCGCGGCACGACGACGCTGCCGGGCGCGCAGCACACGCTC-AGGTCG 2129832
|||| ||| |||||| |||||| || ||| ||||| || || | ||||||
Sbjct 1479 CCATGAGCGAA------GGCACGTGGACGCTTCCTGGCTCGCAG-ACGCGGCCGAGGTCG 1531
Query 2129833 TTGCGCACCAGATCGACGATCATGAGGTTCTC 2129864
||||||| || || |||||||||||||||||
Sbjct 1532 TTGCGCATGAGGTCCACGATCATGAGGTTCTC 1563
>seq224
Length=6403
Score = 109 bits (120), Expect = 8e-18
Identities = 165/232 (71%), Gaps = 6/232 (3%)
Strand=Plus/Minus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|||| ||||||||||||||||||||||||| || ||| |||| ||| |||| |
Sbjct 6337 ATCTTCAAGGTGCTCAAGCAGGTGCACCCCGACAC---TGG--CATC-TCCTCCAAGGCG 6284
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
|| | || |||||||||| || ||| | |||| |||| || |||| |
Sbjct 6283 ATCACCATTCTGAACTCGTTCATCGTGGACCAGTTCGAGAAGATCGCCATGCAGGCTGCA 6224
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
| ||| ||||| |||||| ||| | | | |||||||||||||||||||||
Sbjct 6223 CAGCTGTCGCGCGTGAACAAGAAGCCCACCCTGACCTCTCGCGAGATCCAGACCGCCGTG 6164
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|| ||| | | | |||||| || |||| ||||||||| || ||||||||||
Sbjct 6163 CGTCTGGTTCTCCCCGGCGAGCTCGCCAAGCACGCCGTGTCTGAGGGCACCA 6112
>seq771
Length=3966
Score = 95.1 bits (104), Expect = 2e-13
Identities = 157/218 (72%), Gaps = 18/218 (8%)
Strand=Plus/Minus
Query 1817561 CCTCGGCGCGCGCGTCTCAGA-CTGGGGCACATGGAGGTTCATCTCGTCGCCGTCAAAGT 1817619
|||||||||| || || || ||||||||| || | |||||||||||| ||||| ||||
Sbjct 2436 CCTCGGCGCGGGCCTCGTAGGTCTGGGGCACGTGCACGTTCATCTCGTCTCCGTCGAAGT 2377
Query 1817620 CGGCATTGTAGGTGCCCG-TGACGGCCAGGTTGAACCGCATGGTACGGC-CGGGC--ATG 1817675
|||| ||||||| || | |||| | |||||| |||| || || | ||| | |||
Sbjct 2376 CGGCGTTGTAGG-GCGAGCAGACGCTCTCGTTGAAGCGCAGCGTGCGCCACGGACCGATG 2318
Query 1817676 GGCACCACCTTGTG---CATGAGCATGGAGCCCAT---GTGGAGTGAGGGCTGCCGGTTC 1817729
| ||| |||| |||| ||||| ||| ||| || |||||||| |||||
Sbjct 2317 ACCCTCACGGTGTGAGCCATG---ATGGA---CATGCGGTGCAGGGAGGGCTGGCGGTTG 2264
Query 1817730 ATCACCACGGCGTCGCCGGCGCGCAGGTGACGCTCGAC 1817767
| || ||| |||||||| | ||||||| ||||| ||
Sbjct 2263 AACAGCACCACGTCGCCGTCCAGCAGGTGGCGCTCCAC 2226
>seq3218
Length=1360
Score = 93.3 bits (102), Expect = 6e-13
Identities = 322/491 (66%), Gaps = 35/491 (7%)
Strand=Plus/Minus
Query 1600329 CGGGGCCGCGTGG-TCGGGCGTGAATCTTGTCGATGGCCACGTGGCGCAGGGCCTGGTAG 1600387
|| |||| | ||| |||||| || |||||||||||| ||| ||| || ||||||
Sbjct 1311 CGCGGCCCCCTGGCTCGGGCATGCATCTTGTCGATGACCATGTGCTTGAGCTTCTGGTAA 1252
Query 1600388 TAGACCGGCGCCGTAAAGATCAACGCCTCCATGGGCTCGCCGGTG-TGCGGGTGGTAGAG 1600446
||||| || || | ||||| | |||| || |||||| || ||| ||| | | ||||
Sbjct 1251 TAGACGGGTCCCATGAAGATGAGCGCCGGCAGGGGCTCCCCCGTGATGCCCGAGC-AGAG 1193
Query 1600447 CACCTCCTTGCCGTAGC-------GCTCGCATCCGTGGCGAGCCAACTCGGCGG-----C 1600494
|| ||||||||| || || ||| ||| | |||| |||| | |
Sbjct 1192 CATGTCCTTGCCGGAGTAGGCAAAGCCCGCCTCCACGA-GAGCG--CTCGTCATGCTCTC 1136
Query 1600495 GACATCGTCGACG-GTGACGCCG-----CCAAAGGGCGTGCCGTCGCCCACATAGCCCTC 1600548
|| |||| | || ||| | ||||| | ||||||| | | |||| |
Sbjct 1135 CACGCGGTCGGCCTGTCCCGCGGGCTCTCCAAAAGCGGTGCCGTAGAAGAACCTGCCCGC 1076
Query 1600549 GCGGCAGGCCACCTTGCCCAGGAGGGCCTCCATCATCTTGCCCATGGTCATGCGCGACGG 1600608
|| | | | |||||| ||| ||| | ||||| || | |||||||||||||||
Sbjct 1075 GCAGACGCCGGCCTTGCTGCCGAGCAGCTCGAGGATCTTCCCGACGGTCATGCGCGACGG 1016
Query 1600609 GATGGCGTGCGGGTTGATCACAATGTCGGGCGTGGCAC-CGCCGCGAGGCGACCAGGGCA 1600667
|| |||||||||| || | | ||| ||| |||| | |||| | || ||||||
Sbjct 1015 GAACCCGTGCGGGTTCATGATGAGGTCCGGCA--GCACTCCCCGCTCGCTGA--AGGGCA 960
Query 1600668 TGTCCTCGGTGGAGCGCACGCTG---CCCACGGTGCCCTTTTGGCCGTGGCGCGACGACA 1600724
|||| ||| | |||| || ||||| ||||||||| |||||||||||||| |
Sbjct 959 GGTCCACGGCGTC---CACGATGGCGCCCACCACGCCCTTTTGCCCGTGGCGCGACGAGA 903
Query 1600725 GTTTGTCGCCCACCTCGGGCTGGCGCATGGCCCGCGTGACGATCTTGACCGCGTTGGCGC 1600784
||||| |||| |||||| | || | ||| || ||||||||| | ||||
Sbjct 902 ACTTGTCTCCCAGCTCGGGGCGTCGAGGGTGTCGCACGAGGATCTTGACGCTGCAGGCGG 843
Query 1600785 CGTCGCCGTTG 1600795
|||| |||||
Sbjct 842 TGTCGTCGTTG 832
>seq2089
Length=2118
Score = 93.3 bits (102), Expect = 6e-13
Identities = 322/491 (66%), Gaps = 35/491 (7%)
Strand=Plus/Minus
Query 1600329 CGGGGCCGCGTGG-TCGGGCGTGAATCTTGTCGATGGCCACGTGGCGCAGGGCCTGGTAG 1600387
|| |||| | ||| |||||| || |||||||||||| ||| ||| || ||||||
Sbjct 903 CGCGGCCCCCTGGCTCGGGCATGCATCTTGTCGATGACCATGTGCTTGAGCTTCTGGTAA 844
Query 1600388 TAGACCGGCGCCGTAAAGATCAACGCCTCCATGGGCTCGCCGGTG-TGCGGGTGGTAGAG 1600446
||||| || || | ||||| | |||| || |||||| || ||| ||| | | ||||
Sbjct 843 TAGACGGGTCCCATGAAGATGAGCGCCGGCAGGGGCTCCCCCGTGATGCCCGAGC-AGAG 785
Query 1600447 CACCTCCTTGCCGTAGC-------GCTCGCATCCGTGGCGAGCCAACTCGGCGG-----C 1600494
|| ||||||||| || || ||| ||| | |||| |||| | |
Sbjct 784 CATGTCCTTGCCGGAGTAGGCAAAGCCCGCCTCCACGA-GAGCG--CTCGTCATGCTCTC 728
Query 1600495 GACATCGTCGACG-GTGACGCCG-----CCAAAGGGCGTGCCGTCGCCCACATAGCCCTC 1600548
|| |||| | || ||| | ||||| | ||||||| | | |||| |
Sbjct 727 CACGCGGTCGGCCTGTCCCGCGGGCTCTCCAAAAGCGGTGCCGTAGAAGAACCTGCCCGC 668
Query 1600549 GCGGCAGGCCACCTTGCCCAGGAGGGCCTCCATCATCTTGCCCATGGTCATGCGCGACGG 1600608
|| | | | |||||| ||| ||| | ||||| || | |||||||||||||||
Sbjct 667 GCAGACGCCGGCCTTGCTGCCGAGCAGCTCGAGGATCTTCCCGACGGTCATGCGCGACGG 608
Query 1600609 GATGGCGTGCGGGTTGATCACAATGTCGGGCGTGGCAC-CGCCGCGAGGCGACCAGGGCA 1600667
|| |||||||||| || | | ||| ||| |||| | |||| | || ||||||
Sbjct 607 GAACCCGTGCGGGTTCATGATGAGGTCCGGCA--GCACTCCCCGCTCGCTGA--AGGGCA 552
Query 1600668 TGTCCTCGGTGGAGCGCACGCTG---CCCACGGTGCCCTTTTGGCCGTGGCGCGACGACA 1600724
|||| ||| | |||| || ||||| ||||||||| |||||||||||||| |
Sbjct 551 GGTCCACGGCGTC---CACGATGGCGCCCACCACGCCCTTTTGCCCGTGGCGCGACGAGA 495
Query 1600725 GTTTGTCGCCCACCTCGGGCTGGCGCATGGCCCGCGTGACGATCTTGACCGCGTTGGCGC 1600784
||||| |||| |||||| | || | ||| || ||||||||| | ||||
Sbjct 494 ACTTGTCTCCCAGCTCGGGGCGTCGAGGGTGTCGCACGAGGATCTTGACGCTGCAGGCGG 435
Query 1600785 CGTCGCCGTTG 1600795
|||| |||||
Sbjct 434 TGTCGTCGTTG 424
>seq1714
Length=2471
Score = 86.0 bits (94), Expect = 9e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 725071 GCGAGATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCT 725130
||||||||||||||||||||||||| ||| | | ||| || || |||| ||||||||| |
Sbjct 2388 GCGAGATCCAGACCGCCGTGCGCCTCATCCTCCCCGGTGAGCTCGCCAAGCACGCCGTGT 2329
Query 725131 CCGAGGGCACCA 725142
| ||||||||||
Sbjct 2328 CTGAGGGCACCA 2317
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177264703885892
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |