Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicosporidium_20sp._20ATCC_2050920_20[genbank_20GCA_5F000690575.1_ 202014-05-13] 5,666 sequences; 12,373,820 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq114 251 1e-60 seq60 217 2e-50 seq74 174 2e-37 seq2188 161 1e-33 seq2727 156 6e-32 seq2314 150 3e-30 seq1765 127 3e-23 seq224 109 8e-18 seq771 95.1 2e-13 seq3218 93.3 6e-13 seq2089 93.3 6e-13 seq1714 86.0 9e-11 >seq114 Length=7431 Score = 251 bits (278), Expect = 1e-60 Identities = 557/832 (67%), Gaps = 38/832 (5%) Strand=Plus/Minus Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847 ||||||||||||||||||||||||||||| |||||||| || |||||||| ||| | Sbjct 1322 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCGGTGTACCTGGAGCCCTGGCACGCGGACGTG 1263 Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907 || ||||||||||||| |||||||||||||| ||||| || | |||| ||| Sbjct 1262 ATGGACTGGCTGGACCTGCGCAAGAACCACGGCAA-GGAGGAGG-----CTCGCGCCCGC 1209 Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGC 261967 || || || ||||| ||||||| ||||||||||||| ||| | | | | | | | Sbjct 1208 GACCTGTTCTACGGGCTGTGGATCCCCGACCTGTTTATGAAGCGCGTCGAGGCGGACGGG 1149 Query 261968 GACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCC 262027 | ||| || || ||||| ||||||||| |||||| || | ||| | | Sbjct 1148 CAGTGGAGCCTGTTCTGCCCCAACGAGGCGCCGGGCCTGGCGGACGTGTGGGGCCCCGAG 1089 Query 262028 TTTGACGCCCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNCGCGGACCGTCG-TGCCCGC 262086 ||||| | ||||| | | |||| | | || ||| ||| Sbjct 1088 TTTGAGTCGCTCTACGCGCGGTACGAGCGCGAGGGCCGCGCGCGCA-AGACGATGCGCGC 1030 Query 262087 ACGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGT 262146 | ||| | |||| |||||| | | ||| || | ||||| ||||||||||||||| | Sbjct 1029 GCAGCAGCTGTGGTTCGCCATTTTGGAGGCGCAGACGGAGACGGGCACGCCCTACATGCT 970 Query 262147 CTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCACGACAGAG-G 262205 |||||||||||| |||| | ||||||||||||||||||||||| | | || | Sbjct 969 GTACAAGGACGCCTGCAACGCCAAGAGCAACCAGCAGAACCTGGGCACGATCA-AGTGCA 911 Query 262206 CCAACCTGTGCACCGAGATCGTCCAGTTTTCGTCGCCCACCGAGGCAAGTGTGTGCAACC 262265 |||||||||||||||||||||| ||| || | ||| |||| | |||||||||| Sbjct 910 GCAACCTGTGCACCGAGATCGTCGAGTACACGGCCCCCGACGAGACGGCCGTGTGCAACC 851 Query 262266 T---CTCGAGCGTGGCCCTGCCCAAGTTTGTCATCCCCGACCCGCGCGGCGAGGATCGCA 262322 | ||||| | || ||||| || |||| || || | || |||||| |||| Sbjct 850 TCGCCTCGA---TCGCGCTGCCGCGCTTCGTCAAGGACGGCCAGGGCCGCGAGGGCCGCA 794 Query 262323 GTGGCCCATTGGATTCGCGCTACGACGATGCCGGCGTGGCCCTGGGCATGGTCTTTGACC 262382 || | | || | || |||| |||| || | || | | |||||||| Sbjct 793 --AGCTCGTGGGCT----CCTTGGACG----CGGCCACGCGC--CGCTTCGACTTTGACC 746 Query 262383 --ATGGCGCCCTCCATGAAGTTGTCCAGGCGATGGCGCGCAACCTCAATCGTGTGATTGA 262440 ||||| || || || || | | |||||||||| || || | || || Sbjct 745 GGCTGGCG--------GAGGTCGTGTCGGTGGCGACGCGCAACCTGAACCGCATCATCGA 694 Query 262441 CATTAATCACTACCCGGTGCCCGAGGCCCGCCACTCGAATCTGCGCCATCGACCGATGGG 262500 | | || |||||||| || |||| |||| | | || || || || || || || || Sbjct 693 CGTCAACCACTACCCCGTCCCCGCGGCCGAGCGCAGCAACCTCCGGCACCGCCCCATCGG 634 Query 262501 CGTCGGCGTGCAGGGCCTCGCCGACGTGTTTGCCCTGATGGACCTGCCGTGGGAGAGCGC 262560 | | |||||||||||||| ||||||| || |||| ||| | |||| | || | | Sbjct 633 CCTGGGCGTGCAGGGCCTGGCCGACGCCTTCATCCTGCTGGGCATGCCCTTTGACGGGCC 574 Query 262561 CGGCGCACGACGTCTCAACCGCGCCATCTTTGAGACGGTCTACCATGCGGCG 262612 || || | |||||||||| |||||| ||||| |||||| | || ||| Sbjct 573 CGAGGCCGCGCAGCTCAACCGCGACATCTTCGAGACCGTCTACTACGCCGCG 522 Score = 199 bits (220), Expect = 6e-45 Identities = 293/405 (72%), Gaps = 21/405 (5%) Strand=Plus/Minus Query 262870 AGCGGCCGCTGGGACTGGGACGCACTGCGGGCGTCGGTTCGACAGCATGGCCTGCGCAAC 262929 ||||| || ||||||||||| || ||||| ||| | || || |||| || ||||||||| Sbjct 410 AGCGGGCGGTGGGACTGGGAGGCCCTGCGCGCGACCGTGCGCGAGCACGGGCTGCGCAAC 351 Query 262930 TCGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAG 262989 ||| |||| ||||||| |||||||||||| | || |||||| ||||||||| |||| Sbjct 350 TCGCTGCTGGTGGCGCCCATGCCCACGGCGAGCACCAGCCAGATCTTGGGCAACAACGAG 291 Query 262990 GCGTTCGAGGTCATCACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACC 263049 |||||| | ||| |||||||||||| ||||||||||||||||||||| || ||| Sbjct 290 TGCTTCGAGCCCTACACCAGCAACATCTACGTGCGCCGCGTGCTCTCGGGCGAGTTCACC 231 Query 263050 GTGGTCAACCGCCACCTGGT---CAAGCGCATGGTGGCGCGCGGC-CTGTGGACGCCCGA 263105 |||||||||| ||||||| | | | | || | || | ||| ||| ||||| |||| Sbjct 230 GTGGTCAACCACCACCTGCTGCACGACCTCACG--CGCCTGGGGCTCTG-GGACG-CCGA 175 Query 263106 CTTTCGCGACCG-GCTCATTGCGGCACAG-GGCTCGGTGCAGGGCTTTGACGACGAGGAG 263163 | || || || ||| | || ||| | || |||||| || | | ||| Sbjct 174 C-CTCAAGAACGAGCTGGTGGC-CCACGGCGGGTCGGTGGCGGCCCTCGAC--------- 126 Query 263164 GTGCCGCCCGATCTCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAACCGGGTGACC 263223 ||||| || ||||||| || | |||||| ||||||||| | | || ||| Sbjct 125 GTGCCCGAGGACCTCAAGGGCCTGTACAAGACGGTGTGGGAGATCAAGCAGCGCGTGCTG 66 Query 263224 ATTGATATGGCGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAG 263268 | || ||||| |||||||||| |||| |||||||||||||| Sbjct 65 GTCGACATGGCCGCCGACCGCGGCGCCTACATCGACCAGAGCCAG 21 Score = 185 bits (204), Expect = 1e-40 Identities = 217/290 (75%), Gaps = 10/290 (3%) Strand=Plus/Minus Query 259901 CAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAG 259960 |||| | |||||| ||| |||| |||||||| || || ||||| || ||||||||| Sbjct 1604 CAGCGTTGGTTCACGCACGCGTCGCCGACGCTCTTCAACGCGGGCACCCCCCGCCCGCAG 1545 Query 259961 AATTCGTCG-TGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACAC 260019 | | | |||||| || ||| |||||||| ||| |||||||||||||| ||||| Sbjct 1544 C-TGAGCAGCTGCTTTTTGGTGGCCATGAAGGGCGACAGCATCGAGGGCATCTACGACAC 1486 Query 260020 GCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACA--- 260076 ||||||| |||||||| |||| |||| || ||||||||||| || ||||| Sbjct 1485 GCTCAAGGAGTGCGCGGCCATCAGCAAGAGCGCGGGCGGCATCGG----GCTGCACATGC 1430 Query 260077 -CAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTG 260135 | | | |||||| |||| | ||| | ||||||||||||| | ||||||| | | Sbjct 1429 ACGACATCCGCGCCACGGGGTCGTACATCCGGGGCACCAACGGCACGAGCAACGGCGTGG 1370 Query 260136 TGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAGTGC 260185 |||||||||| ||||| || ||||||||||| || ||||| |||||| || Sbjct 1369 TGCCCATGCTGCGCGTGTTCAACGACACGGCTCGGTACGTGGACCAGGGC 1320 >seq60 Length=8765 Score = 217 bits (240), Expect = 2e-50 Identities = 248/325 (76%), Gaps = 6/325 (2%) Strand=Plus/Plus Query 1456452 TGCACTGTGACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGCCGTCGACCGA-C 1456510 ||||| ||||||||||| ||||||||| | ||||||| || || | | ||| | Sbjct 2736 TGCACACCGACTTTGCCTGCCTGCTCTACTCCATGCTCGAGCACCCGCTCGCCATCGAGC 2795 Query 1456511 GTGCCCAAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCG 1456570 || | || ||| || | | ||||||||| || |||||||| ||||||||| |||| | Sbjct 2796 GT-CTGAACCAGCTCGTGGGCGAGGCCGTGGAAATCGAGAAGGAGTTTGTCTGCGATGCC 2854 Query 1456571 CTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTG 1456630 |||||||||| |||||||||||||||| || ||| ||| |||||||||||| | |||| Sbjct 2855 CTGCCGGTGGATCTCATCGGCATGAACGGCA-AGCTGATGAGCCAGTACATTG-AGTTTG 2912 Query 1456631 TCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCG 1456690 | |||||| ||||||| || || || |||| |||| |||| | |||| ||| Sbjct 2913 TGAGCGACCGGCTGCTCGTCGCCCT-GGGTGCGCCCAAGCTCTACAACGCCACCAATCCG 2971 Query 1456691 TTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT- 1456749 ||| ||||||||| | |||||||| ||||||||||||||||||||||| ||||| Sbjct 2972 TTCGACTGGATGGAGCTCATCTCGCTGCAGGGCAAGACCAACTTTTTCGAGAAGCGCGTC 3031 Query 1456750 GGCGAGTACGCCAAGGCCGGCGTCA 1456774 || || ||| ||||||||||||| Sbjct 3032 GGAGACTACCAAAAGGCCGGCGTCA 3056 Score = 158 bits (174), Expect = 2e-32 Identities = 184/247 (74%), Gaps = 1/247 (0%) Strand=Plus/Plus Query 1455819 GCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCACTGGGTGTCGCTGAGCGACGACGAG 1455878 ||||||||||| || || || ||||| | |||||| | ||| | | | ||||| Sbjct 2125 GCCGAGGAGGTGGATCTGGGTAGCGACATGCAGGACTGGGAGAAGCTCAATGGCAACGAG 2184 Query 1455879 CGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGA 1455938 ||||| |||||| ||| ||||||| || ||| || | | |||||||||||| || Sbjct 2185 CGCCACTTCATCTCCCACATCCTCGCTTTCTTT-GCTGGCTCCGATGGCATCGTCCTGGA 2243 Query 1455939 GAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGG 1455998 |||||||| || || |||||||||||||| | || ||||| ||| |||||||| Sbjct 2244 GAACCTGGGCGTGCGTTTTATGAAAGAGGTGACCGTTCCCGAGGCCCGTGCCTTTTACGG 2303 Query 1455999 GTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTA 1456058 ||||||||| |||||||| |||||||||||||| | ||| || ||| | || ||||| Sbjct 2304 GTTCCAGATTGCCATCGAGAACATCCACTCTGAGATGTACAGTCTGCTGTTGGAGACCTA 2363 Query 1456059 CGTCAAG 1456065 | ||||| Sbjct 2364 CATCAAG 2370 Score = 145 bits (160), Expect = 1e-28 Identities = 176/236 (75%), Gaps = 9/236 (4%) Strand=Plus/Plus Query 1456076 AGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACT 1456135 |||||||| ||||||| || |||| ||| ||||| || ||||| ||| |||||||||| Sbjct 2502 AGAAGGACTACCTCTTCCGTGCCACCGAGACGGTACCCGTGGTGAAGAAGAAGGCCGACT 2561 Query 1456136 GGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACA-CTTTGCCGAGCGGCTCGTCGGCT 1456194 |||| || ||||||||| ||| || | |||||| ||||| || || | | Sbjct 2562 GGGCTCTGCGCTGGATCAAC------GGCTCGGAGAGCTTTGCGGAGCGCCTGGTGGCGT 2615 Query 1456195 TTGCC-GCGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGA 1456253 |||| |||| |||||||| || ||| ||||| |||||| |||||| ||| |||||| Sbjct 2616 TTGCGTGCGTGGAGGGCATTTTCTTCAGCGGCAGCTTCTGCTCCATCTACTGGGTCAAGA 2675 Query 1456254 AGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGACGA 1456309 ||||||| ||||||||||| | || |||| |||||| | ||| ||| || || Sbjct 2676 AGCGCGGTCTCATGCCCGG-CCTCACCTTTTCCAACGAGCTCATCTCTCGTGATGA 2730 >seq74 Length=8418 Score = 174 bits (192), Expect = 2e-37 Identities = 334/486 (69%), Gaps = 11/486 (2%) Strand=Plus/Minus Query 1600258 CTCCATCTCTCCAAGGCGGAAGCCGCCCGAGCGCGAGCGGCCCTCGACCGGCTGCTTGGT 1600317 |||||||||||| | ||| | || || ||| | ||| ||||| || |||||| || Sbjct 6839 CTCCATCTCTCCGAAGCGCAGACCTCCGTCGCGGGCGCGTCCCTCCACGGGCTGCCGCGT 6780 Query 1600318 GAGCATCTGGACGGGGCCGCGTGGTCGGGCGTGAATCTTGTCGATGGCCACGTGGCGCAG 1600377 || ||||| ||||| ||||| | ||| ||||| |||||||| ||| ||| ||| Sbjct 6779 CAGGATCTGCACGGGCCCGCGAGCTCGAGCGTGGATCTTGTCATCCACCATGTGCTTCAG 6720 Query 1600378 GGCCTGGTAGTAGACCGGCGCCGTAAAGATCAACGCCTCCATGGGCTCGCCGGTGTGCGG 1600437 |||||||||| ||| ||||| |||| | | | | ||| |||| Sbjct 6719 CCGCTGGTAGTAGGTCGGGTTGAGGAAGATGGGCGCCACGAGGCGGCGGCCCGTGTAGCC 6660 Query 1600438 GTGGTAGAGCACCTCCTTGCCGTAGCGCTCGCATCCGT-GGCGAGCCAACTCGGCGGCGA 1600496 || ||| | |||||| ||| ||||| ||||| |||| || | | | |||| || Sbjct 6659 GTTGTACATGACCTCCCATCCGCGGCGCTGATATCCGCAGGCGTGC-AGCGCCGCGGAGA 6601 Query 1600497 CATCGTCGACGGTGACGCCGCCAAAGGGCGTGCCGTCGCCCACATAGCCCTCGCGGCAGG 1600556 | ||| ||||| ||| | ||||||||| |||| ||| | || || || || Sbjct 6600 TGTTGTCCACGGTCACGTCCGTGAAGGGCGTGGCGTCTCCCTCTCGACCGACGAGGGCGG 6541 Query 1600557 CCACCTTGCCCAGGAGGGCCTCCATCATCTTGCCCATGGTCATGCGCGACGGGATGGCGT 1600616 | ||||||| || ||| ||||||| || | ||| |||||||||||||| |||||||||| Sbjct 6540 CGACCTTGCTCATGAGCGCCTCCACCAAATGGCCGATGGTCATGCGCGAGGGGATGGCGT 6481 Query 1600617 GCGGGTTGATCACAATGTCGGGCGTGGCACCGCCGCGAGGCGACCAGGGCATGTCCTC-- 1600674 | |||||||| | | ||||||| | || | ||| | || | ||||||||||| Sbjct 6480 GGGGGTTGATGATGAGGTCGGGCACGATGCC-CTGCGCG--GAAAAAGGCATGTCCTCCT 6424 Query 1600675 -GGTGGAGCGCACGCTGCCCACGGTGCCCTTTTGGCCGTGGCGCGACGACAGTTTGTCGC 1600733 |||| || | |||| | |||||||||||| ||||| | ||| | | ||||||| Sbjct 6423 GGGTGTAG---GTGATGCCGATGGTGCCCTTTTGTCCGTGTCTCGAGGCAAACTTGTCGC 6367 Query 1600734 CCACCT 1600739 | |||| Sbjct 6366 CGACCT 6361 Score = 105 bits (116), Expect = 1e-16 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1602090 CACGTGCGCCCCAAGGGCCAGGTTGCTCACGAGGCCGCACGAGCCGCCCTCGGGCGTCTC 1602149 ||||| || | || |||||||| | ||||| ||||| | |||||||||||||| Sbjct 5168 CACGTACGTCATGAGCGCCAGGTTCTTGACGAGCCCGCAGGCCTGTCCCTCGGGCGTCTC 5109 Query 1602150 CACGGGACACAAGAGACCCGCCACGCTGTCGCGCAGTTGGCGCACCTTGGGCAGTTTGCC 1602209 |||| |||| | ||| | | ||| | |||| |||||| ||||| ||| ||||| Sbjct 5108 GGCGGGGCACACCATGCCCCACTGGGTGTTGTGCAGCTGGCGCGGCTTGGCCAGCTTGCC 5049 Query 1602210 CTCCTTGTTGATGGGCGTGTTGACGCGGCGCATGTTGGACAGGGCCGACGTGACGGTCAT 1602269 ||| |||||||| ||||| |||||||| || ||||| | |||| || |||| Sbjct 5048 CTCGCGCCCGATGGGCGAGTTGATGCGGCGCAGGTGCGACAGCGTGGACGCGAACGTCAG 4989 Query 1602270 GCGATTGTGCATCTGCGCGACGCCCG 1602295 ||| || ||| ||||| ||||||| Sbjct 4988 GCGGTTCAGCACCTGCGACACGCCCG 4963 >seq2188 Length=2021 Score = 161 bits (178), Expect = 1e-33 Identities = 282/403 (70%), Gaps = 22/403 (5%) Strand=Plus/Plus Query 1816027 CTCAATGTAGGTGGCGTCGGCGCCGTCGCCGCCATATGCAAACTGGACAATGTCGCCGTT 1816086 ||| ||| |||| | || |||||| |||| || ||||| || || ||||| | Sbjct 36 CTCTATGGCGGTGCCTTCCATGCCGTCCTCGCCGTAGAGGAACTGCACGATCTCGCCCAT 95 Query 1816087 GGCGTTGCGCACGAGGCCGCCG---CGCTTGATCTGCAGGCTCTCCATCGACTTGATGCA 1816143 ||||||||||||| |||| || ||| || ||| |||||| | ||||| Sbjct 96 GGCGTTGCGCACGGTGCCGTCGTAGCGCACCATG---AGGTCCTCCATGGCCTTGACCAG 152 Query 1816144 CCGGCGCTGGATGTAGCCACGTCCGGCGGTCTTGACGGCCGTGTCGACCAGGCCCTCGCG 1816203 ||||||||||||||||| | ||| ||||| || |||||||||| || |||||||| Sbjct 153 GCGGCGCTGGATGTAGCCGGTGCTGGCCGTCTTCACCGCCGTGTCGATGAGCCCCTCGCG 212 Query 1816204 GCCGCCGATCATGTGCAAAAACATCTCGCGCGAGTTGAGGCCGCGCTCGTACGAGTTGCG 1816263 |||||| || ||| || || | ||| | | | || |||||| ||| ||||| Sbjct 213 GCCGCCCATGGCGTGGAAGAAAAACTCCTGGGGGGACAGCCCGCGCAGGTAGGAGTTTTC 272 Query 1816264 CACAAAGCCGCGGCTCTCGGGCGGCGGCACGGCCTCGGCGTGCCG--GTAGCAGCCCAGT 1816321 ||| || ||||||||||||||| || | | | || | ||| | || || || || Sbjct 273 CACGAACCCGCGGCTCTCGGGC-CCG--AAGTCGTC--CTTGCTGAAGT-GCGGCAGCGT 326 Query 1816322 G---TGCGCGAACCCGACTCGGAGTGGATGCGCTGGCCCTCATTGCTCTGCTGGCCCACG 1816378 | ||||||||||||| || | ||||||| |||||| | |||||||||| ||| Sbjct 327 GCGCTGCGCGAACCCGA-----AGGGAATGCGCTTGCCCTCGACGTTCTGCTGGCCGACG 381 Query 1816379 CAGCCGCACATCTGGGTGATGTTAAAGACGCTACCCTTGGAGC 1816421 ||| || |||||||| |||||| | || | |||||||||| Sbjct 382 CAGGCGATCATCTGGGAGATGTTGATGAAGGATCCCTTGGAGC 424 Score = 125 bits (138), Expect = 1e-22 Identities = 141/186 (76%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 1818078 GGCGTCACGCGCTCGGGAAAGGTGAGCGTCTTGACGAT-CTCATAGGGCACGCCCACCTC 1818136 ||||| || |||||||||||| |||||| |||| ||| |||||||||||| ||| Sbjct 1549 GGCGTGACCGTCTCGGGAAAGGTCAGCGTCAGCGCGATGCTC-CAGGGCACGCCCAGCTC 1607 Query 1818137 GTCAATGTCAATCTCGGGGTCGGGGCTGATGACGGCGCGCGCGGTAAAGTTGACGCGCTT 1818196 ||| | | | | ||||||| ||||||| | ||| |||| ||||| |||||||| Sbjct 1608 GTCCAGCGCCAGGTTGGGGTCGCCCGTGATGACCGTGCGGGCGGAAAAGTCCACGCGCTT 1667 Query 1818197 GCCCATGCAATTGCCGCGGATCCTGCCCTCCTTGCCCTTGAACCGCTCCACGAGGCCCTT 1818256 ||||||| |||||||||| | ||| |||||||||||| |||||| ||| || ||| Sbjct 1668 GCCCATGAGGTTGCCGCGGACGCGGCCGCCCTTGCCCTTGAGCCGCTCGGCGATGCTCTT 1727 Query 1818257 GGTGGG 1818262 | |||| Sbjct 1728 GATGGG 1733 Score = 89.7 bits (98), Expect = 7e-12 Identities = 231/352 (66%), Gaps = 9/352 (3%) Strand=Plus/Plus Query 1817421 CATGAGCACGCCGCGGTCCATAAATGTGTCGTTGGTCGTGAGGAAGCCACAACCGACGAG 1817480 |||||||| | |||| |||| ||| | |||| | |||| || || ||||| | || Sbjct 1044 CATGAGCAAGTCGCGCTCCAGAAACGCGTCGCGCGAGGTGAAGAGGCGGCAACCCAGCAG 1103 Query 1817481 GGCGTCCATGACCAGGCCGATGATGGGCTTGTTGGCCTGCGGCGACACGGTCTTGAGGGC 1817540 ||||| || | ||| || | || ||||||||| || |||| | ||| || Sbjct 1104 CGCGTCTTGCACGATGCCCATCACCGGACGGTTGGCCTGAGGGCTCACGATGTTGGCGGG 1163 Query 1817541 CACGTTCATGGTGTGCGTCACCTCGGCGCGCGCGT-----CTCAGACTGGGGCACATGGA 1817595 ||| |||| | | | |||||||||||| || ||| | || | |||| Sbjct 1164 GACGGCCATGATCTCCCGGACCTCGGCGCGCACGGGATGGCTCTGCACGGCGTGCATG-- 1221 Query 1817596 GGTTCATCTCGTCGCCGTCAAAGTCGGCATTGTAGGTGCCCGTGACGGCCAGGTTGAACC 1817655 ||||||||||||||||| |||||||| ||||||| || || | |||||||| || Sbjct 1222 --TTCATCTCGTCGCCGTCGAAGTCGGCGTTGTAGGGCGAGGTCACCGACAGGTTGAGCC 1279 Query 1817656 GCATGGTACGGCCGGGCATGGGCACCACCTTGTGCATGAGCATGGAGCCCATGTGGAGTG 1817715 | | || | | ||||| | ||| ||| | |||||| | |||| || | Sbjct 1280 GGAACGTGCTGTAGGGCAAGATGCGCACGCGATGCCCCATCATGGACATCTTGTGCAGCG 1339 Query 1817716 AGGGCTGCCGGTTCATCACCACGGCGTCGCCGGCGCGCAGGTGACGCTCGAC 1817767 ||||||||||||| | | || ||||||| | ||||| ||||| || Sbjct 1340 AGGGCTGCCGGTTGAAGATGACCAGGTCGCCGTTGGTGAGGTGCCGCTCCAC 1391 >seq2727 Length=1645 Score = 156 bits (172), Expect = 6e-32 Identities = 260/367 (71%), Gaps = 8/367 (2%) Strand=Plus/Plus Query 332854 GGCGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGAC 332913 |||||| | ||| | | ||||| | || || || |||||||| | || ||||||||| Sbjct 1283 GGCGTCGGAGAGCCTGCCGAAGCGGACGACCGCGCAGCGGCTCTGGATGGGCTCGATGAC 1342 Query 332914 CATTGACGACG-TGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGG 332972 | ||| | | |||||||||| || || || || || || | | ||| ||||||| Sbjct 1343 C-TTGCTGCTGGTGTTGCAGGCGAGCGCGAAGCGGGTGGTGGCGCTGTGCAGCTCCATGG 1401 Query 332973 TCGACCGGAGGGCCTGTTGGGCCGCCGGCGTGA-GGCAGTCGGCCTCGTCGAGGATGATG 333031 | ||| || ||||| || || | | || | |||| ||||||||||| | |||| | Sbjct 1402 TGCGCCGCAGAGCCTGCTGCGCGCCAGAGGTCATGGCA-TCGGCCTCGTCCAAAATGACG 1460 Query 333032 ATCTTGTGGCGCCCGTGCGGCAGATCAACCCTTTTCGAGGCGTGGTGTTTGATGATCTTG 333091 ||||||||||| ||| | || ||| || | | | ||| || ||||| | | Sbjct 1461 ATCTTGTGGCGTCCGGGGGGGAGAGTCACACGCTGCTGCGCGAATTGCTTGATCTTGCCG 1520 Query 333092 CGCACGACGTCCACGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCACGGCCTCGTCGG-- 333149 || |||||||| | |||||||||||| |||||| || || ||||| || ||| ||| Sbjct 1521 CGGACGACGTCGATGCCGCGCTCGTCGCTCGCGTTCAGCTCCAGCACCGCGTCG-CGGTA 1579 Query 333150 CGGCCGCACCCAAGAGGACGCGCGCCAGGCACGCGATGCTCGTGGTCTTGCCCGTGCCGG 333209 | | || |||| || ||||||||||| ||||||||| |||||||||||||||| Sbjct 1580 CTG-GGCGCCCAGCAGCGTACGCGCCAGGCATTGGATGCTCGTCGTCTTGCCCGTGCCGG 1638 Query 333210 GCGGACC 333216 |||| || Sbjct 1639 GCGGGCC 1645 >seq2314 Length=1923 Score = 150 bits (166), Expect = 3e-30 Identities = 163/208 (78%), Gaps = 6/208 (3%) Strand=Plus/Minus Query 1456569 CGCTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTT 1456628 |||| ||||||| |||||||| ||||||||| |||| |||| || ||||| | | || Sbjct 1581 CGCTCCCGGTGGATCTCATCGGGATGAACGCCGCCGC-CATGGGCGAGTACGTCCAGTTC 1523 Query 1456629 TGTCGCCGACCGCCTGCTCG-CGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAAC 1456687 || |||||||||||||||| | || ||||||| || | || |||| || | ||| Sbjct 1522 -GTGGCCGACCGCCTGCTCGTCAGC-CTCGGCTACGC-GCCGCTCTACAGGGCCAAGAAC 1466 Query 1456688 CCGTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGC 1456747 || ||| ||||||||| | ||||||||| |||||||||| |||||||||||||||||| Sbjct 1465 CCCTTCGACTGGATGGAGCTCATCTCGCTCCAGGGCAAGACGAACTTTTTCGAGCGCCGC 1406 Query 1456748 GT-GGCGAGTACGCCAAGGCCGGCGTCA 1456774 || || |||||| ||||||||||| Sbjct 1405 GTGGGGGAGTACCAGCGGGCCGGCGTCA 1378 >seq1765 Length=2407 Score = 127 bits (140), Expect = 3e-23 Identities = 306/452 (68%), Gaps = 36/452 (8%) Strand=Plus/Plus Query 2129425 GCCTTGAGCAGGATCTCGGCAAACTCGGCCTCGGGGTCCGAGTCGGCGACGATGGCGCCG 2129484 || ||||||| ||||| ||||||| |||||||||| || | |||||||||| || Sbjct 1136 GCTTTGAGCATCATCTCCTCAAACTCTCCCTCGGGGTCGGACTGCACGACGATGGCCCCT 1195 Query 2129485 CCGCAGCCCACCGACG-CCGCGCCATCGGCGTCGATGACGGCCGTGCGGATCACCACCGA 2129543 || | | |||||| || || | || | |||||| || ||||| || | Sbjct 1196 CC----CGCGCCGACGGCCACGTGTCCCTGGTGCACGACGGCGGTTCGGATGACGATGTT 1251 Query 2129544 CAGCGAGCAGGCGCCGTCGGCCGAAAAGAATCCCAACGC-GCCCGAGTAGATCCCGCGTG 2129602 || | | ||| ||| || || || || | ||| ||| | ||||||||| || | Sbjct 1252 GAGGTCGAACGCGTCGTTTGCGCTGAAAAAGCCGA-CGCTGCCGGCGTAGATCCCTCGAG 1310 Query 2129603 GGCGATGCTCTTCAAGACGGTCCAAAATGTCCATGCTGCGCGCTTTGGGCGCGCCCGTCA 2129662 | | || || | ||||| ||||| || |||||| |||| ||||||||||| |||| Sbjct 1311 GCCC--GCCCT-CGAGACGCTCCAAGATCTCCATGGAGCGCAGCTTGGGCGCGCCGGTCA 1367 Query 2129663 T---CGAGCCTGGGGGAAAAGCCGCGCGCACGAGGTC---CAGCG---CCGTCTGTTGTC 2129713 | | ||| ||| ||||| ||| |||| ||| || || |||||| | | Sbjct 1368 TGCTCCCGCCCGGG---AAAGCGGCGGCCACGCAGTCGGCCACCGAGGCCGTCTTGAGGC 1424 Query 2129714 GGTCCAACAGGCCGTCGACGGTGGTCACCATCTGGTGCACGGCGGCATAGGTCTCGATCG 2129773 | | | ||| ||| |||| |||||| |||||||| | ||| || | |||||| | Sbjct 1425 GCT------GTCCGCGGACCGTGGACACCATTTGGTGCACCGTGGCGTACGACTCGATGG 1478 Query 2129774 CCATCAGCCGGCCGCGCGGCACGACGACGCTGCCGGGCGCGCAGCACACGCTC-AGGTCG 2129832 |||| ||| |||||| |||||| || ||| ||||| || || | |||||| Sbjct 1479 CCATGAGCGAA------GGCACGTGGACGCTTCCTGGCTCGCAG-ACGCGGCCGAGGTCG 1531 Query 2129833 TTGCGCACCAGATCGACGATCATGAGGTTCTC 2129864 ||||||| || || ||||||||||||||||| Sbjct 1532 TTGCGCATGAGGTCCACGATCATGAGGTTCTC 1563 >seq224 Length=6403 Score = 109 bits (120), Expect = 8e-18 Identities = 165/232 (71%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||| ||||||||||||||||||||||||| || ||| |||| ||| |||| | Sbjct 6337 ATCTTCAAGGTGCTCAAGCAGGTGCACCCCGACAC---TGG--CATC-TCCTCCAAGGCG 6284 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 || | || |||||||||| || ||| | |||| |||| || |||| | Sbjct 6283 ATCACCATTCTGAACTCGTTCATCGTGGACCAGTTCGAGAAGATCGCCATGCAGGCTGCA 6224 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 | ||| ||||| |||||| ||| | | | ||||||||||||||||||||| Sbjct 6223 CAGCTGTCGCGCGTGAACAAGAAGCCCACCCTGACCTCTCGCGAGATCCAGACCGCCGTG 6164 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || ||| | | | |||||| || |||| ||||||||| || |||||||||| Sbjct 6163 CGTCTGGTTCTCCCCGGCGAGCTCGCCAAGCACGCCGTGTCTGAGGGCACCA 6112 >seq771 Length=3966 Score = 95.1 bits (104), Expect = 2e-13 Identities = 157/218 (72%), Gaps = 18/218 (8%) Strand=Plus/Minus Query 1817561 CCTCGGCGCGCGCGTCTCAGA-CTGGGGCACATGGAGGTTCATCTCGTCGCCGTCAAAGT 1817619 |||||||||| || || || ||||||||| || | |||||||||||| ||||| |||| Sbjct 2436 CCTCGGCGCGGGCCTCGTAGGTCTGGGGCACGTGCACGTTCATCTCGTCTCCGTCGAAGT 2377 Query 1817620 CGGCATTGTAGGTGCCCG-TGACGGCCAGGTTGAACCGCATGGTACGGC-CGGGC--ATG 1817675 |||| ||||||| || | |||| | |||||| |||| || || | ||| | ||| Sbjct 2376 CGGCGTTGTAGG-GCGAGCAGACGCTCTCGTTGAAGCGCAGCGTGCGCCACGGACCGATG 2318 Query 1817676 GGCACCACCTTGTG---CATGAGCATGGAGCCCAT---GTGGAGTGAGGGCTGCCGGTTC 1817729 | ||| |||| |||| ||||| ||| ||| || |||||||| ||||| Sbjct 2317 ACCCTCACGGTGTGAGCCATG---ATGGA---CATGCGGTGCAGGGAGGGCTGGCGGTTG 2264 Query 1817730 ATCACCACGGCGTCGCCGGCGCGCAGGTGACGCTCGAC 1817767 | || ||| |||||||| | ||||||| ||||| || Sbjct 2263 AACAGCACCACGTCGCCGTCCAGCAGGTGGCGCTCCAC 2226 >seq3218 Length=1360 Score = 93.3 bits (102), Expect = 6e-13 Identities = 322/491 (66%), Gaps = 35/491 (7%) Strand=Plus/Minus Query 1600329 CGGGGCCGCGTGG-TCGGGCGTGAATCTTGTCGATGGCCACGTGGCGCAGGGCCTGGTAG 1600387 || |||| | ||| |||||| || |||||||||||| ||| ||| || |||||| Sbjct 1311 CGCGGCCCCCTGGCTCGGGCATGCATCTTGTCGATGACCATGTGCTTGAGCTTCTGGTAA 1252 Query 1600388 TAGACCGGCGCCGTAAAGATCAACGCCTCCATGGGCTCGCCGGTG-TGCGGGTGGTAGAG 1600446 ||||| || || | ||||| | |||| || |||||| || ||| ||| | | |||| Sbjct 1251 TAGACGGGTCCCATGAAGATGAGCGCCGGCAGGGGCTCCCCCGTGATGCCCGAGC-AGAG 1193 Query 1600447 CACCTCCTTGCCGTAGC-------GCTCGCATCCGTGGCGAGCCAACTCGGCGG-----C 1600494 || ||||||||| || || ||| ||| | |||| |||| | | Sbjct 1192 CATGTCCTTGCCGGAGTAGGCAAAGCCCGCCTCCACGA-GAGCG--CTCGTCATGCTCTC 1136 Query 1600495 GACATCGTCGACG-GTGACGCCG-----CCAAAGGGCGTGCCGTCGCCCACATAGCCCTC 1600548 || |||| | || ||| | ||||| | ||||||| | | |||| | Sbjct 1135 CACGCGGTCGGCCTGTCCCGCGGGCTCTCCAAAAGCGGTGCCGTAGAAGAACCTGCCCGC 1076 Query 1600549 GCGGCAGGCCACCTTGCCCAGGAGGGCCTCCATCATCTTGCCCATGGTCATGCGCGACGG 1600608 || | | | |||||| ||| ||| | ||||| || | ||||||||||||||| Sbjct 1075 GCAGACGCCGGCCTTGCTGCCGAGCAGCTCGAGGATCTTCCCGACGGTCATGCGCGACGG 1016 Query 1600609 GATGGCGTGCGGGTTGATCACAATGTCGGGCGTGGCAC-CGCCGCGAGGCGACCAGGGCA 1600667 || |||||||||| || | | ||| ||| |||| | |||| | || |||||| Sbjct 1015 GAACCCGTGCGGGTTCATGATGAGGTCCGGCA--GCACTCCCCGCTCGCTGA--AGGGCA 960 Query 1600668 TGTCCTCGGTGGAGCGCACGCTG---CCCACGGTGCCCTTTTGGCCGTGGCGCGACGACA 1600724 |||| ||| | |||| || ||||| ||||||||| |||||||||||||| | Sbjct 959 GGTCCACGGCGTC---CACGATGGCGCCCACCACGCCCTTTTGCCCGTGGCGCGACGAGA 903 Query 1600725 GTTTGTCGCCCACCTCGGGCTGGCGCATGGCCCGCGTGACGATCTTGACCGCGTTGGCGC 1600784 ||||| |||| |||||| | || | ||| || ||||||||| | |||| Sbjct 902 ACTTGTCTCCCAGCTCGGGGCGTCGAGGGTGTCGCACGAGGATCTTGACGCTGCAGGCGG 843 Query 1600785 CGTCGCCGTTG 1600795 |||| ||||| Sbjct 842 TGTCGTCGTTG 832 >seq2089 Length=2118 Score = 93.3 bits (102), Expect = 6e-13 Identities = 322/491 (66%), Gaps = 35/491 (7%) Strand=Plus/Minus Query 1600329 CGGGGCCGCGTGG-TCGGGCGTGAATCTTGTCGATGGCCACGTGGCGCAGGGCCTGGTAG 1600387 || |||| | ||| |||||| || |||||||||||| ||| ||| || |||||| Sbjct 903 CGCGGCCCCCTGGCTCGGGCATGCATCTTGTCGATGACCATGTGCTTGAGCTTCTGGTAA 844 Query 1600388 TAGACCGGCGCCGTAAAGATCAACGCCTCCATGGGCTCGCCGGTG-TGCGGGTGGTAGAG 1600446 ||||| || || | ||||| | |||| || |||||| || ||| ||| | | |||| Sbjct 843 TAGACGGGTCCCATGAAGATGAGCGCCGGCAGGGGCTCCCCCGTGATGCCCGAGC-AGAG 785 Query 1600447 CACCTCCTTGCCGTAGC-------GCTCGCATCCGTGGCGAGCCAACTCGGCGG-----C 1600494 || ||||||||| || || ||| ||| | |||| |||| | | Sbjct 784 CATGTCCTTGCCGGAGTAGGCAAAGCCCGCCTCCACGA-GAGCG--CTCGTCATGCTCTC 728 Query 1600495 GACATCGTCGACG-GTGACGCCG-----CCAAAGGGCGTGCCGTCGCCCACATAGCCCTC 1600548 || |||| | || ||| | ||||| | ||||||| | | |||| | Sbjct 727 CACGCGGTCGGCCTGTCCCGCGGGCTCTCCAAAAGCGGTGCCGTAGAAGAACCTGCCCGC 668 Query 1600549 GCGGCAGGCCACCTTGCCCAGGAGGGCCTCCATCATCTTGCCCATGGTCATGCGCGACGG 1600608 || | | | |||||| ||| ||| | ||||| || | ||||||||||||||| Sbjct 667 GCAGACGCCGGCCTTGCTGCCGAGCAGCTCGAGGATCTTCCCGACGGTCATGCGCGACGG 608 Query 1600609 GATGGCGTGCGGGTTGATCACAATGTCGGGCGTGGCAC-CGCCGCGAGGCGACCAGGGCA 1600667 || |||||||||| || | | ||| ||| |||| | |||| | || |||||| Sbjct 607 GAACCCGTGCGGGTTCATGATGAGGTCCGGCA--GCACTCCCCGCTCGCTGA--AGGGCA 552 Query 1600668 TGTCCTCGGTGGAGCGCACGCTG---CCCACGGTGCCCTTTTGGCCGTGGCGCGACGACA 1600724 |||| ||| | |||| || ||||| ||||||||| |||||||||||||| | Sbjct 551 GGTCCACGGCGTC---CACGATGGCGCCCACCACGCCCTTTTGCCCGTGGCGCGACGAGA 495 Query 1600725 GTTTGTCGCCCACCTCGGGCTGGCGCATGGCCCGCGTGACGATCTTGACCGCGTTGGCGC 1600784 ||||| |||| |||||| | || | ||| || ||||||||| | |||| Sbjct 494 ACTTGTCTCCCAGCTCGGGGCGTCGAGGGTGTCGCACGAGGATCTTGACGCTGCAGGCGG 435 Query 1600785 CGTCGCCGTTG 1600795 |||| ||||| Sbjct 434 TGTCGTCGTTG 424 >seq1714 Length=2471 Score = 86.0 bits (94), Expect = 9e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 725071 GCGAGATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCT 725130 ||||||||||||||||||||||||| ||| | | ||| || || |||| ||||||||| | Sbjct 2388 GCGAGATCCAGACCGCCGTGCGCCTCATCCTCCCCGGTGAGCTCGCCAAGCACGCCGTGT 2329 Query 725131 CCGAGGGCACCA 725142 | |||||||||| Sbjct 2328 CTGAGGGCACCA 2317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177264703885892