Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicosporidium_20sp._20ATCC_2050920_20[genbank_20GCA_5F000690575.1_ 202014-05-13] 5,666 sequences; 12,373,820 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq2724 93.3 4e-14 >seq2724 Length=1646 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| ||||||| || | |||| ||| | ||||| || || || || ||||||||| Sbjct 1307 TGCCGCCGCGCAGACGGAGGACCAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGG 1366 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 || |||| | || || ||||| || || ||| |||| || ||||| || || || | Sbjct 1367 ACAGAGTGCGGCCATCCTCCAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCGGGAG 1426 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | ||||| || || ||||||| || | | | || | ||||| | | || | Sbjct 1427 GAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCCGAAGACTCCA 1486 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || || || || | ||||||||||| || || || ||||| ||||| Sbjct 1487 CCTCGAGGGTGATGGTCTTGCCCGTCAGCGTCTTGACGAAGATCTGCAT 1535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424905056420592