Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Helicosporidium_20sp._20ATCC_2050920_20[genbank_20GCA_5F000690575.1_
202014-05-13] 5,666 sequences; 12,373,820 total letters
Query= NC_028906.1
Length=75933
Score E
Sequences producing significant alignments: (Bits) Value
seq152 129 3e-25
>seq152
Length=7042
Score = 129 bits (142), Expect = 3e-25
Identities = 243/355 (68%), Gaps = 2/355 (1%)
Strand=Plus/Plus
Query 66509 GGGGGGTACCCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCA 66568
|| || ||||| |||||| | ||||| ||||||||||| || || |||||| |
Sbjct 4533 GGCGGCTACCCCGTGGGCCGCATCGTGGAGATCTACGGCCCCGAGTCGAGCGGGAAGACG 4592
Query 66569 ACTCTGTGTCTCCACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATC 66628
|| ||| || ||||| ||||| | | ||||| ||| ||||| || | |||
Sbjct 4593 ACGCTGGCGCTGCACGCCATGGCCGAGGTGCAGAGACGCGGAGGCAAGTGCGTTTTGATC 4652
Query 66629 GACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTG-TGGACCTCGACAA 66687
||||| |||||| | | ||||| | | || | | ||| ||| | ||||| | |||
Sbjct 4653 GACGCCGAGCACGCGTTCGACCCGGTATTCG-CGCGTCGCGCGGGGCTGGACGTGGACGC 4711
Query 66688 CCTCGTGGTGGTTCAGCCCGATACCGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGT 66747
||| || |||||||| ||||||| ||| |||||||||| ||| ||| |
Sbjct 4712 GCTCTACCTGAGCCAGCCCGACTGCGGCGAGGCGGCGCTGGAGATCGCGGACAACCTGAT 4771
Query 66748 CAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCCGTGGCGGCCCTGGTGCCGCGCGC 66807
| || || | || ||| |||| ||| ||||| |||||||| ||||| ||||| ||
Sbjct 4772 CCGCTCCGGGGGCGTGGACATGGTCGCCGTCGACTCGGTGGCGGCGCTGGTCCCGCGAGC 4831
Query 66808 CGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATG 66862
|||| | || ||||| |||||| | || || ||| || |||||||| |||
Sbjct 4832 CGAGATAGAGGGCGAGATCGGGCAGCTGCAGGTGGGCGCCCAGGCGCGCCTGATG 4886
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 242844029399244
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |