Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Helicosporidium_20sp._20ATCC_2050920_20[genbank_20GCA_5F000690575.1_
202014-05-13] 5,666 sequences; 12,373,820 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq2724 127 5e-24
seq55 86.0 1e-11
>seq2724
Length=1646
Score = 127 bits (140), Expect = 5e-24
Identities = 156/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
|||||| |||||||| |||||||| || ||||||||||| |||| | ||| | |||||
Sbjct 1323 GAGGACCAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATC 1382
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || || ||||| || || | ||||||||| | | || || ||||| ||
Sbjct 1383 CTCCAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTC 1442
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|| || || ||||| |||| | | |||| ||| ||| || || || || || ||
Sbjct 1443 CTGGATCTTGGCCTTGACGTTCTCGATGGTGTCCGAAGACTCCACCTCGAGGGTGATGGT 1502
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|||||||| || ||||| ||||||| ||||||
Sbjct 1503 CTTGCCCGTCAGCGTCTTGACGAAGATCTGCAT 1535
>seq55
Length=8980
Score = 86.0 bits (94), Expect = 1e-11
Identities = 106/145 (73%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
|||||| || || || || ||||| || ||||||||||| ||||| | || | || ||
Sbjct 4026 GAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTC 4085
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || ||||||||||| || | ||||||||| | | ||| || ||||| ||
Sbjct 4086 CTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTC 4145
Query 152012 TTGAATTTTTTGTTTGACAGTCTCT 152036
||||| || |||||| |||||
Sbjct 4146 CTGAATCTTGGCCTTGACATTCTCT 4170
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153737037657886
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |