Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_006882.2 Length=45176 Score E Sequences producing significant alignments: (Bits) Value seq52 598 1e-166 >seq52 Length=149364 Score = 598 bits (662), Expect = 1e-166 Identities = 725/985 (74%), Gaps = 2/985 (0%) Strand=Plus/Minus Query 19290 TTTTGTGAGTGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTT 19349 |||||||||||||| || || || || ||||| | || | ||||||||||| || | Sbjct 86189 TTTTGTGAGTGGGTAACTAGCACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTGTTA 86130 Query 19350 ATGATTCCTTGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCG 19409 ||||| ||| ||| || | |||||| | ||||| |||| ||||||||||| ||| Sbjct 86129 ATGATCCCTACTTTATTAACAGCTACTTCAGTATTTATCATCGCATTTATCGCAGCTCCG 86070 Query 19410 CCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAAT 19469 ||||| ||||| ||||| || |||||||| ||||| || || ||| | || ||||||||| Sbjct 86069 CCTGTCGATATCGATGGTATCCGTGAGCCTGTTTCAGGTTCATTACTATATGGAAACAAT 86010 Query 19470 ATTATTTCTGGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATC 19529 || || |||| || | |||||| || || || || || | ||||| || || || Sbjct 86009 ATCATCACTGGTGCTATTATTCCAACTTCTAACGCTATCGGTTTACACTTCTACCCAATT 85950 Query 19530 TGGGAAGCCGGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTC 19589 |||||||| | || | ||||||||||||||||| || ||||| || |||||| | || Sbjct 85949 TGGGAAGCAGCTTCTCTTGATGAGTGGTTATACAATGGTGGTCCTTACCAACTTATCGTT 85890 Query 19590 TTCCACTTCTTAATAGGAGTAGCAGCATACGCTGGTAGACAGTGGGAACTATCTTACAGA 19649 | ||| ||||| |||| || ||||| ||| | |||||||| |||||| | Sbjct 85889 TGCCATTTCTTCTTAGGCGTTTGTTCATACATGGGTCGTGAGTGGGAATTATCTTTTCGT 85830 Query 19650 TTAGGAATGAGACCATGGATATTCGTAGCATATACAGCACCACTATCAGCAGCTCTTGCT 19709 ||||| ||| | || ||||| || || || |||||||| | | |||||| ||| Sbjct 85829 TTAGGTATGCGTCCTTGGATCGCAGTTGCTTACTCAGCACCAGTTGCTGCAGCTACAGCT 85770 Query 19710 GTGTTTCTCGTTTACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTATC 19769 || || || |||| ||| | || ||||| ||| ||||||||||||| | |||||| Sbjct 85769 GTATTCATCATTTATCCAATCGGTCAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTATC 85710 Query 19770 TCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCATCCG 19829 ||||||||||| ||||| ||| ||||||||||||| || ||||| ||||||||||| || Sbjct 85709 TCTGGTACTTTCAACTTCATGATCGTATTCCAAGCTGAGCACAACATCCTTATGCACCCA 85650 Query 19830 TTCCACATGCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGA 19889 ||||| ||||| ||||||||||| ||||| ||||| || | ||||||||||||||||| Sbjct 85649 TTCCATATGCTTGGTGTTGCTGGTGTATTTGGTGGTTCATTATTCTCTGCTATGCACGGT 85590 Query 19890 AGTTTGGTTACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGGC 19949 | || ||||| || | || ||||||||||| | | ||| ||| | || Sbjct 85589 TCACTTGTAACTTCTTCTTTAATTCGTGAAACAACTGAAAACGAATCAGCTAACGAAGGT 85530 Query 19950 TATAAGTTCGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGG 20009 || || ||||| ||||| ||||| || || || || || || || || || ||||| || Sbjct 85529 TACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCATGGCTACTTCGGT 85470 Query 20010 AGATTGATATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGCT 20069 | || || || ||||||||||||||||| || |||||||| ||||||||||| | ||| Sbjct 85469 CGTTTAATTTTCCAATATGCTTCTTTCAACAACTCTCGTTCATTACATTTCTTCTTAGCT 85410 Query 20070 ACTTTCCCCGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAAC 20129 ||| || || ||||| || ||| | || | | || || | |||||||| |||||| Sbjct 85409 GCTTGGCCAGTTGTTGGTATTTGGTTCACTGCTTTAGGTATTTCAACTATGGCATTCAAC 85350 Query 20130 CTTAATGGTTTTAACTTTAACCAGTCAGTAGTTGATGTCA-ACGGAAAGATAATCCCAAC 20188 | |||||||| ||||| ||||| ||||| || ||| ||| | || ||||| || Sbjct 85349 TTAAATGGTTTCAACTTCAACCAATCAGTTGTAGAT-TCACAAGGTCGTGTAATCAACAC 85291 Query 20189 ATGGGCTGATGTATTAAATAGAGCTAACCTCGGATTTGAAGTTATGCACGAGCGCAATGC 20248 ||||| || | | || | || ||||| || | ||||| ||||| ||||| || || Sbjct 85290 TTGGGCAGACATTATCAACCGTGCCAACCTTGGTATGGAAGTAATGCATGAGCGTAACGC 85231 Query 20249 TCATAACTTCCCACTTGATTTAGCT 20273 ||| ||||||||| | ||||||||| Sbjct 85230 TCACAACTTCCCATTAGATTTAGCT 85206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144441083711556