Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq52 737 0.0 >seq52 Length=149364 Score = 737 bits (816), Expect = 0.0 Identities = 728/941 (77%), Gaps = 0/941 (0%) Strand=Plus/Minus Query 211612 GGTTGGTTTGGTGTTCTTATGATCCCATGTCTTCTAGCTGCAACAACATGCTTTATCGTA 211671 |||||||||||||| | |||||||| | | || | || || || |||||| | Sbjct 86147 GGTTGGTTTGGTGTGTTAATGATCCCTACTTTATTAACAGCTACTTCAGTATTTATCATC 86088 Query 211672 GCATTCATCGCAGCACCTCCCGTTGATATCGACGGAATCCGTGAACCAGTAGCTGGTTCA 211731 ||||| |||||||| || || || |||||||| || |||||||| || || | |||||| Sbjct 86087 GCATTTATCGCAGCTCCGCCTGTCGATATCGATGGTATCCGTGAGCCTGTTTCAGGTTCA 86028 Query 211732 TTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCAAACGCAATCGGT 211791 || | ||||| ||||| |||||| ||||||| || ||||| |||| ||||| |||||| Sbjct 86027 TTACTATATGGAAACAATATCATCACTGGTGCTATTATTCCAACTTCTAACGCTATCGGT 85968 Query 211792 TTACACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGCTCTACAATGGTGGT 211851 ||||||||||| || || ||||||||||| |||||||||||||| | |||||||||||| Sbjct 85967 TTACACTTCTACCCAATTTGGGAAGCAGCTTCTCTTGATGAGTGGTTATACAATGGTGGT 85908 Query 211852 CCTTACCAGTTGGTAATCTTCCACTTCCTTATCGGAATCTCAGCATACATGGGAAGACAG 211911 |||||||| | | | | ||| ||| | | || | | |||||||||| | || Sbjct 85907 CCTTACCAACTTATCGTTTGCCATTTCTTCTTAGGCGTTTGTTCATACATGGGTCGTGAG 85848 Query 211912 TGGGAACTTTCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTTGCTTATTCAGCACCT 211971 |||||| | || | |||||||||||||||||||||||| |||||||| |||||||| Sbjct 85847 TGGGAATTATCTTTTCGTTTAGGTATGCGTCCTTGGATCGCAGTTGCTTACTCAGCACCA 85788 Query 211972 GTATCAGCAGCTTTCGCTGTATTCCTTGTTTACCCATTCGGTCAGGGTTCATTCTCAGAC 212031 || | |||||| ||||||||| | |||| ||| ||||||| ||||| ||||| || Sbjct 85787 GTTGCTGCAGCTACAGCTGTATTCATCATTTATCCAATCGGTCAAGGTTCTTTCTCTGAT 85728 Query 212032 GGTATGCCTTTAGGTATATCAGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAACAT 212091 ||||||||||||||||| || || || |||||||||||| ||||||||||||| || || Sbjct 85727 GGTATGCCTTTAGGTATCTCTGGTACTTTCAACTTCATGATCGTATTCCAAGCTGAGCAC 85668 Query 212092 AACATCCTTATGCACCCATTCCATATGGCAGGTGTTGCAGGTATGTTCGGTGGAGCATTA 212151 ||||||||||||||||||||||||||| |||||||| ||| | || ||||| ||||| Sbjct 85667 AACATCCTTATGCACCCATTCCATATGCTTGGTGTTGCTGGTGTATTTGGTGGTTCATTA 85608 Query 212152 TTCTCTGCTATGCACGGTTCTCTTGTTACATCTTCACTTATCCGTGAAACCACTGGTTTA 212211 |||||||||||||||||||| ||||| || ||||| | || |||||||| |||| Sbjct 85607 TTCTCTGCTATGCACGGTTCACTTGTAACTTCTTCTTTAATTCGTGAAACAACTGAAAAC 85548 Query 212212 GATTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAGACATATAACATCGTTGCT 212271 || ||| ||| | |||||||| ||||| ||||||||||| || || ||||||||||| Sbjct 85547 GAATCAGCTAACGAAGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCA 85488 Query 212272 GCACATGGATACTTCGGTAGACTTATCTTCCAGTATGCATCATTCAACAACAGCAGAAGT 212331 || ||||| ||||||||| | | || ||||| ||||| || ||||||||| | Sbjct 85487 GCTCATGGCTACTTCGGTCGTTTAATTTTCCAATATGCTTCTTTCAACAACTCTCGTTCA 85428 Query 212332 TTACACTTCTTCCTCGCATCATGGCCTGTTATCTGTGTATGGTTAACCTCTATGGGTATC 212391 ||||| |||||| | || | ||||| ||| | || | ||||| || || | ||||| Sbjct 85427 TTACATTTCTTCTTAGCTGCTTGGCCAGTTGTTGGTATTTGGTTCACTGCTTTAGGTATT 85368 Query 212392 TGCACAATGGCATTCAACCTAAATGGATTCAACTTCAACCAATCAGTTGTTGATGCATCA 212451 | || |||||||||||| ||||||| ||||||||||||||||||||||| ||| || | Sbjct 85367 TCAACTATGGCATTCAACTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAA 85308 Query 212452 GGTAAGGTTGTTCCTACTTGGGGTGATGTTCTTAACAGAGCAAACCTTGGTATGGAAGTT 212511 ||| || | ||||||| || || | ||| | || ||||||||||||||||| Sbjct 85307 GGTCGTGTAATCAACACTTGGGCAGACATTATCAACCGTGCCAACCTTGGTATGGAAGTA 85248 Query 212512 ATGCACGAAAGAAATGCACACAACTTCCCACTTGACTTAGC 212552 ||||| || | || || |||||||||||| | || ||||| Sbjct 85247 ATGCATGAGCGTAACGCTCACAACTTCCCATTAGATTTAGC 85207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807552161573560