Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq291 143 2e-29 seq290 143 2e-29 seq288 143 2e-29 seq287 143 2e-29 seq286 143 2e-29 seq157 143 2e-29 seq24 143 2e-29 seq156 134 9e-27 >seq291 Length=14816 Score = 143 bits (158), Expect = 2e-29 Identities = 94/104 (90%), Gaps = 5/104 (5%) Strand=Plus/Minus Query 25893 GTTTATAATAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GG 25947 |||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 7851 GTTTATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGG 7792 Query 25948 TAATCTCGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||||||||||| |||||||||||||||||||||||||||| Sbjct 7791 GAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 7748 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 5878 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCCC 5819 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 5818 GTCTGTATTTAGCCTTA 5802 >seq290 Length=20300 Score = 143 bits (158), Expect = 2e-29 Identities = 94/104 (90%), Gaps = 5/104 (5%) Strand=Plus/Minus Query 25893 GTTTATAATAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GG 25947 |||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 7230 GTTTATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGG 7171 Query 25948 TAATCTCGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||||||||||| |||||||||||||||||||||||||||| Sbjct 7170 GAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 7127 Score = 143 bits (158), Expect = 2e-29 Identities = 94/104 (90%), Gaps = 5/104 (5%) Strand=Plus/Minus Query 25893 GTTTATAATAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GG 25947 |||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 17697 GTTTATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGG 17638 Query 25948 TAATCTCGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||||||||||| |||||||||||||||||||||||||||| Sbjct 17637 GAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 17594 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 5257 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCCC 5198 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 5197 GTCTGTATTTAGCCTTA 5181 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 15724 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCCC 15665 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 15664 GTCTGTATTTAGCCTTA 15648 >seq288 Length=162339 Score = 143 bits (158), Expect = 2e-29 Identities = 94/104 (90%), Gaps = 5/104 (5%) Strand=Plus/Minus Query 25893 GTTTATAATAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GG 25947 |||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 7174 GTTTATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGG 7115 Query 25948 TAATCTCGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||||||||||| |||||||||||||||||||||||||||| Sbjct 7114 GAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 7071 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 5201 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCCC 5142 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 5141 GTCTGTATTTAGCCTTA 5125 >seq287 Length=34814 Score = 143 bits (158), Expect = 2e-29 Identities = 94/104 (90%), Gaps = 5/104 (5%) Strand=Plus/Minus Query 25893 GTTTATAATAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GG 25947 |||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 10480 GTTTATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGG 10421 Query 25948 TAATCTCGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||||||||||| |||||||||||||||||||||||||||| Sbjct 10420 GAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 10377 Score = 143 bits (158), Expect = 2e-29 Identities = 94/104 (90%), Gaps = 5/104 (5%) Strand=Plus/Minus Query 25893 GTTTATAATAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GG 25947 |||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 20885 GTTTATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGG 20826 Query 25948 TAATCTCGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||||||||||| |||||||||||||||||||||||||||| Sbjct 20825 GAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 20782 Score = 143 bits (158), Expect = 2e-29 Identities = 94/104 (90%), Gaps = 5/104 (5%) Strand=Plus/Minus Query 25893 GTTTATAATAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GG 25947 |||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 31294 GTTTATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGG 31235 Query 25948 TAATCTCGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||||||||||| |||||||||||||||||||||||||||| Sbjct 31234 GAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 31191 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 8507 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCCC 8448 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 8447 GTCTGTATTTAGCCTTA 8431 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 18912 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCCC 18853 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 18852 GTCTGTATTTAGCCTTA 18836 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 29321 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCCC 29262 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 29261 GTCTGTATTTAGCCTTA 29245 Score = 82.4 bits (90), Expect = 5e-11 Identities = 50/53 (94%), Gaps = 0/53 (0%) Strand=Plus/Minus Query 25893 GTTTATAATAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG 25945 |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 63 GTTTATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG 11 >seq286 Length=1206827 Score = 143 bits (158), Expect = 2e-29 Identities = 94/104 (90%), Gaps = 5/104 (5%) Strand=Plus/Minus Query 25893 GTTTATAATAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GG 25947 |||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1197158 GTTTATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGG 1197099 Query 25948 TAATCTCGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||||||||||| |||||||||||||||||||||||||||| Sbjct 1197098 GAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 1197055 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 1194537 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCCC 1194478 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 1194477 GTCTGTATTTAGCCTTA 1194461 Score = 87.8 bits (96), Expect = 1e-12 Identities = 64/73 (88%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| ||| ||||| |||||||||||||||||||||||| | Sbjct 1205572 CTCTCTTTTCAAAGTTCTTTTCATCTT-CCCTCGCGGTACTTGTTCGCTATCGGTCTCCC 1205514 Query 20007 GGTAATATTTAGC 20019 | |||||||| Sbjct 1205513 GTCTGTATTTAGC 1205501 >seq157 Length=15948 Score = 143 bits (158), Expect = 2e-29 Identities = 94/104 (90%), Gaps = 5/104 (5%) Strand=Plus/Minus Query 25893 GTTTATAATAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GG 25947 |||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 6199 GTTTATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGG 6140 Query 25948 TAATCTCGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||||||||||| |||||||||||||||||||||||||||| Sbjct 6139 GAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 6096 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 4226 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCCC 4167 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 4166 GTCTGTATTTAGCCTTA 4150 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 14452 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCCC 14393 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 14392 GTCTGTATTTAGCCTTA 14376 >seq24 Length=19852 Score = 143 bits (158), Expect = 2e-29 Identities = 94/104 (90%), Gaps = 5/104 (5%) Strand=Plus/Plus Query 25893 GTTTATAATAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GG 25947 |||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 983 GTTTATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGG 1042 Query 25948 TAATCTCGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||||||||||| |||||||||||||||||||||||||||| Sbjct 1043 GAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 1086 Score = 143 bits (158), Expect = 2e-29 Identities = 94/104 (90%), Gaps = 5/104 (5%) Strand=Plus/Plus Query 25893 GTTTATAATAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GG 25947 |||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 11319 GTTTATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGG 11378 Query 25948 TAATCTCGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||||||||||| |||||||||||||||||||||||||||| Sbjct 11379 GAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 11422 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 2940 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCCC 2999 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 3000 GTCTGTATTTAGCCTTA 3016 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 13289 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCCC 13348 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 13349 GTCTGTATTTAGCCTTA 13365 >seq156 Length=16859 Score = 134 bits (148), Expect = 9e-27 Identities = 93/104 (89%), Gaps = 6/104 (6%) Strand=Plus/Minus Query 25893 GTTTATAATAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GG 25947 |||||| ||||||||||||||| |||||||||||||||||||||||||||| || Sbjct 7629 GTTTATTCCAAGCCCGTTCCCTTG-CTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGG 7571 Query 25948 TAATCTCGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||||||||||| |||||||||||||||||||||||||||| Sbjct 7570 GAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 7527 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 16206 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCCC 16147 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 16146 GTCTGTATTTAGCCTTA 16130 Score = 100 bits (110), Expect = 2e-16 Identities = 69/77 (90%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 5659 CTCTCT-TTCAAAGTTCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCCC 5601 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 5600 GTCTGTATTTAGCCTTA 5584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334945971267131