Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq282 95.1 2e-14 seq226 91.5 3e-13 >seq282 Length=165158 Score = 95.1 bits (104), Expect = 2e-14 Identities = 108/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 245187 CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGT 245246 ||||||||| |||||| | || || |||||||| || ||||||||||||| ||||| Sbjct 54971 CGTTGAAGACGCGCAGCATGGGGACGATGCCGTTGGAAGTGCCGTTGGTGCCCCGGATGT 55030 Query 245247 AGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGA 245306 | | || || | | || |||| ||||| | ||| | ||||||||| |||||||| Sbjct 55031 ATGACCCGGTGGCGCGGATGTTGTGCATGGAGAGGCCGATGCCGCCGGCGGACTTGGAGA 55090 Query 245307 TGAGGGCGCAGCTCTTGATGGTGTC 245331 || |||||| ||||| |||||| Sbjct 55091 TGCAGGCGCACTCCTTGAGGGTGTC 55115 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 244739 GTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAG 244798 ||||| ||||| || ||||||||||||||||| ||| || ||||||||| |||| Sbjct 53129 GTGCACAGGTTGGAGCTCTTGATGGTGCCCAGGTTCTGCTGGTTGGACTTGCGGTTGGCA 53188 Query 244799 GCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGC 244842 | ||||||||| ||||||||||| |||||||| | ||| || Sbjct 53189 GAGTCCTTGTACAGCATGAAGGGGTTGCCGGTCTCCACCTGCGC 53232 >seq226 Length=211063 Score = 91.5 bits (100), Expect = 3e-13 Identities = 102/134 (76%), Gaps = 3/134 (2%) Strand=Plus/Plus Query 42643 AGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGA 42702 ||||||||||| | |||||| | || |||||||| || | | || | || | ||| Sbjct 103510 AGAAGAAGGCGCAGTGGGCGATGAAGTGGATCGACAG--CAGCAGCTGCTTTGCG-GAGC 103566 Query 42703 GGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCT 42762 ||||||| || | | || ||| ||||||||| |||||| ||| ||||| |||||||| Sbjct 103567 GGCTGGTGGCGTATGCCTGCGTGGAGGGCATCCACTTCTCCGGCTCCTTCTGCTCCATCT 103626 Query 42763 TCTGGCTCAAGCAG 42776 ||||||||||| || Sbjct 103627 TCTGGCTCAAGAAG 103640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944335646923760