Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq226 104 3e-17 seq214 104 3e-17 seq282 82.4 9e-11 >seq226 Length=211063 Score = 104 bits (114), Expect = 3e-17 Identities = 115/153 (75%), Gaps = 3/153 (2%) Strand=Plus/Minus Query 127576 ACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAA 127635 ||| |||||||| ||||||||| | |||||| || | || || ||||| |||||| Sbjct 103658 ACCGGGCATGAGCTGCCGCTTCTTGAGCCAGAAGATGGAGCAGAAGGAGCCGGAGAAGTG 103599 Query 127636 GATCCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATC 127695 ||| |||||||| || || |||| | || ||||| |||||| ||| | | | || Sbjct 103598 GATGCCCTCCACGCAGGCATACGCCACCAGCCGCTCCGCAAAGCAGCTGC---TGCTGTC 103542 Query 127696 AAACCACTTCATCGCCCACTGTGCCTTTTTCTC 127728 | |||||||||||||||||| ||||| ||||| Sbjct 103541 GATCCACTTCATCGCCCACTGCGCCTTCTTCTC 103509 >seq214 Length=2433418 Score = 104 bits (114), Expect = 3e-17 Identities = 81/97 (84%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 127581 GCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCC 127640 |||||||||| |||||||| | |||||| || | ||| || ||||| ||||||||||| | Sbjct 799715 GCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAACAGAAGGAGCCGGAGAAGAAGATGC 799656 Query 127641 CCTCCACACACGCGAACGCAAATAGACGCTCGGCAAA 127677 ||||||| ||||| ||||| | || ||||||||||| Sbjct 799655 CCTCCACGCACGCAAACGCCAGCAGCCGCTCGGCAAA 799619 >seq282 Length=165158 Score = 82.4 bits (90), Expect = 9e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 |||||||| | ||||| ||||| ||||| || ||||| |||| ||| |||| |||||| Sbjct 51324 TAGATGTTTGAGGTGTAGGGCTCGAAGCATTCGTTGTTGCCCAGGATCTGGGAGGTGGAG 51383 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCG 115997 || ||||||||||| |||| || || |||||| Sbjct 51384 GCGGTGGGCATGGGGGCCACCAGCAGCGAGTTGCG 51418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613504891679160