Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_015283.1 Length=176428 Score E Sequences producing significant alignments: (Bits) Value seq52 767 0.0 >seq52 Length=149364 Score = 767 bits (850), Expect = 0.0 Identities = 760/983 (77%), Gaps = 0/983 (0%) Strand=Plus/Minus Query 168491 TTCTGCGAATGGGTAACAAGCACTAACAACAGACTTTATGTTGGTTGGTTCGGTGTCTTA 168550 || || || |||||||| |||||| | ||| | | || | |||||||| ||||| ||| Sbjct 86189 TTTTGTGAGTGGGTAACTAGCACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTGTTA 86130 Query 168551 ATGATCCCATGTTTATTAACAGCAGCAGCATGTTTCATTGTTGCATTTATTGCTGCACCA 168610 |||||||| |||||||||||| | || || || | |||||||| || || || Sbjct 86129 ATGATCCCTACTTTATTAACAGCTACTTCAGTATTTATCATCGCATTTATCGCAGCTCCG 86070 Query 168611 CCTGTCGATATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAAC 168670 |||||||||||||| || ||| | || ||||| ||||| | || | ||||||||||| Sbjct 86069 CCTGTCGATATCGATGGTATCCGTGAGCCTGTTTCAGGTTCATTACTATATGGAAACAAT 86010 Query 168671 ATCATCTCAGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTACACTTCTACCCAATT 168730 |||||| | ||||| || ||||| |||| ||||| |||||| ||||||||||||||||| Sbjct 86009 ATCATCACTGGTGCTATTATTCCAACTTCTAACGCTATCGGTTTACACTTCTACCCAATT 85950 Query 168731 TGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCCTTACCAGTTGGTAATC 168790 |||||||||||| | | |||||||||||||| ||||||||||||||||| | | | Sbjct 85949 TGGGAAGCAGCTTCTCTTGATGAGTGGTTATACAATGGTGGTCCTTACCAACTTATCGTT 85890 Query 168791 TTCCACTTCCTAATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAATTATCATACAGA 168850 | ||| ||| | | || | | | | ||||||||| | ||||||||||||| | | Sbjct 85889 TGCCATTTCTTCTTAGGCGTTTGTTCATACATGGGTCGTGAGTGGGAATTATCTTTTCGT 85830 Query 168851 CTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTGCA 168910 |||||||| | ||||||||| |||||||| ||||||||||| ||||||| || Sbjct 85829 TTAGGTATGCGTCCTTGGATCGCAGTTGCTTACTCAGCACCAGTTGCTGCAGCTACAGCT 85770 Query 168911 GTATTCCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGAATT 168970 |||||| | | || ||| | ||||| |||||||||||||||||||||||| |||| || Sbjct 85769 GTATTCATCATTTATCCAATCGGTCAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTATC 85710 Query 168971 TCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCATCCC 169030 ||||| || |||||||||||| ||||||||||||| ||||||||||| |||||||| || Sbjct 85709 TCTGGTACTTTCAACTTCATGATCGTATTCCAAGCTGAGCACAACATCCTTATGCACCCA 85650 Query 169031 TTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATGGT 169090 ||||||||| || || || ||| | || ||||| || ||||||| || ||||| ||| Sbjct 85649 TTCCATATGCTTGGTGTTGCTGGTGTATTTGGTGGTTCATTATTCTCTGCTATGCACGGT 85590 Query 169091 TCACTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATGGT 169150 ||||||||||| |||||| |||| | || || ||||| | ||||| ||| | ||| Sbjct 85589 TCACTTGTAACTTCTTCTTTAATTCGTGAAACAACTGAAAACGAATCAGCTAACGAAGGT 85530 Query 169151 TACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTCGGT 169210 ||||| |||||||||||||||||||| || || || |||||||| ||||| ||||||||| Sbjct 85529 TACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCATGGCTACTTCGGT 85470 Query 169211 AGATTAATCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCA 169270 | ||||| ||||| ||||| |||||||||||| | | || |||||| |||| Sbjct 85469 CGTTTAATTTTCCAATATGCTTCTTTCAACAACTCTCGTTCATTACATTTCTTCTTAGCT 85410 Query 169271 GTGTTCCCAGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAAC 169330 | | |||||||| || | ||||| || || | ||||| | || |||||||||||| Sbjct 85409 GCTTGGCCAGTTGTTGGTATTTGGTTCACTGCTTTAGGTATTTCAACTATGGCATTCAAC 85350 Query 169331 TTGAACGGATTTAACTTTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTACA 169390 || || || || ||||| |||||||||||||||||| | ||| | || || Sbjct 85349 TTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAAGGTCGTGTAATCAACACT 85290 Query 169391 TGGGGTGACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACGCT 169450 |||| ||| | | ||| | || |||||||||||||||||||||||||||||||||||| Sbjct 85289 TGGGCAGACATTATCAACCGTGCCAACCTTGGTATGGAAGTAATGCATGAGCGTAACGCT 85230 Query 169451 CACAACTTCCCACTAGACTTAGC 169473 |||||||||||| |||| ||||| Sbjct 85229 CACAACTTCCCATTAGATTTAGC 85207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564439476288480