Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_015285.1 Length=174285 Score E Sequences producing significant alignments: (Bits) Value seq52 744 0.0 >seq52 Length=149364 Score = 744 bits (824), Expect = 0.0 Identities = 751/974 (77%), Gaps = 2/974 (0%) Strand=Plus/Minus Query 162384 TTTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACT 162443 ||| || |||||||||||| || | ||||| | || |||||||||| || || | Sbjct 86190 TTTTTGTGAGTGGGTAACTAGCACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTGTT 86131 Query 162444 GATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTC 162502 ||||| || ||| | || |||| || || || || ||| |||| || |||| |||| Sbjct 86130 AATGATCCCTACTTTATTAACAGCTACT-TCAGTATTTATCATCGCATTTATCGCAGCTC 86072 Query 162503 CCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACA 162562 | ||||| || ||||| || |||||||| || || | |||||| | | ||||| |||| Sbjct 86071 CGCCTGTCGATATCGATGGTATCCGTGAGCCTGTTTCAGGTTCATTACTATATGGAAACA 86012 Query 162563 ACATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCA 162622 | |||||| ||||||| || ||||| |||| ||||| || ||| | |||||||| || | Sbjct 86011 ATATCATCACTGGTGCTATTATTCCAACTTCTAACGCTATCGGTTTACACTTCTACCCAA 85952 Query 162623 TCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAG 162682 | |||||||| || || |||||||||||| | || || |||||||||| |||||| | | Sbjct 85951 TTTGGGAAGCAGCTTCTCTTGATGAGTGGTTATACAATGGTGGTCCTTACCAACTTATCG 85892 Query 162683 TATTCCACTTCCTGATCGGCATCTATGCCTACATGGGACGTGAATGGGAACTCTCTTACC 162742 | | ||| ||| | | ||| | | | | |||||||| ||||| |||||| | |||| | Sbjct 85891 TTTGCCATTTCTTCTTAGGCGTTTGTTCATACATGGGTCGTGAGTGGGAATTATCTTTTC 85832 Query 162743 GTCTTGGTATGCGTCCATGGATCTGCGTAGCATACTCTGCACCTGTTGCAGCAGCATCGG 162802 || | ||||||||||| |||||| || || ||||| ||||| ||||| ||||| | | Sbjct 85831 GTTTAGGTATGCGTCCTTGGATCGCAGTTGCTTACTCAGCACCAGTTGCTGCAGCTACAG 85772 Query 162803 CAGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCCTTGGGTA 162862 | || ||| | | ||||| |||||||||||||||||||||| | ||||| || |||| Sbjct 85771 CTGTATTCATCATTTATCCAATCGGTCAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTA 85712 Query 162863 TCAGTGGTACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTGATGCATC 162922 || |||||| ||||||| |||| | || |||||||| ||||||||||| || ||||| | Sbjct 85711 TCTCTGGTACTTTCAACTTCATGATCGTATTCCAAGCTGAGCACAACATCCTTATGCACC 85652 Query 162923 CCTTCCACATGTTGGGTGTCGCAGGTGTCTTCGGTGGTTCACTGTTCAGTGCAATGCACG 162982 | ||||| ||| | ||||| || ||||| || ||||||||| | ||| ||| ||||||| Sbjct 85651 CATTCCATATGCTTGGTGTTGCTGGTGTATTTGGTGGTTCATTATTCTCTGCTATGCACG 85592 Query 162983 GTTCTTTGGTTACATCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAGAACTATG 163042 |||| | || || ||||| | | ||||| || ||||||| || ||| ||| | | Sbjct 85591 GTTCACTTGTAACTTCTTCTTTAATTCGTGAAACAACTGAAAACGAATCAGCTAACGAAG 85532 Query 163043 GTTACAAGTTCGGTCAAGAAGAAGAGACATACAACATCGTCGCAGCCCATGGTTACTTCG 163102 ||||||| ||||||||||||||||| || ||||||||||| ||||| ||||| ||||||| Sbjct 85531 GTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCATGGCTACTTCG 85472 Query 163103 GTCGTTTGATCTTCCAATATGCATCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTG 163162 ||||||| || ||||||||||| || ||||||||||| ||||| || || |||||| | | Sbjct 85471 GTCGTTTAATTTTCCAATATGCTTCTTTCAACAACTCTCGTTCATTACATTTCTTCTTAG 85412 Query 163163 CTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCAACCATGGCATTCA 163222 |||| ||||| ||||| || || |||||||| || | || | ||||| |||||||||| Sbjct 85411 CTGCTTGGCCAGTTGTTGGTATTTGGTTCACTGCTTTAGGTATTTCAACTATGGCATTCA 85352 Query 163223 ACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACA 163282 || | || ||||||||||||||||| || | | ||| || |||||||| | |||| Sbjct 85351 ACTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAAGGTCGTGTAATCAACA 85292 Query 163283 CCTGGGCAGACGTTCTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCACGAGCGCAATG 163342 | ||||||||| || | |||||||| | ||||||||||| ||||| ||||| || | Sbjct 85291 CTTGGGCAGACATTATCAACCGTGCCAACCTTGGTATGGAAGTAATGCATGAGCGTAACG 85232 Query 163343 CTCACAACTTCCCA 163356 |||||||||||||| Sbjct 85231 CTCACAACTTCCCA 85218 Score = 398 bits (440), Expect = 8e-106 Identities = 515/706 (73%), Gaps = 4/706 (1%) Strand=Plus/Minus Query 163615 GGGTGGTTTGATGTCCTGGATGACTGGCTTAAGCGCGATCGTTTCGTATTTATTGGTTGG 163674 || ||||||||||| | |||||||||||| || || |||||||| ||| | || ||| Sbjct 18098 GGTTGGTTTGATGTAGTAGATGACTGGCTTCGTCGTGACCGTTTCGTCTTTCTAGGATGG 18039 Query 163675 TCTGGATTACTACTTCTTCCCACTGCTTATATGGCAATTGGTGGCTGGCTTACTGGTACA 163734 || || ||| || | | || || || || ||||| ||||||| ||| |||| || || Sbjct 18038 TCAGGGTTATTATTATTGCCTACAGCATACCTGGCACTTGGTGGTTGGTTTACAGGAACT 17979 Query 163735 ACTTTCGTTACGTCGTGGTACACCCATGGACTGGCAACTTCCTATCTTGAGGGTGCTAAT 163794 || || || ||||| ||||| || ||||| | ||| |||| ||| | || || |||| Sbjct 17978 ACATTTGTAACGTCTTGGTATACTCATGGTTTAGCATCTTCATATTTAGAAGGATGTAAT 17919 Query 163795 TTTCTCACAGCGGCTGTGTCAACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTT-CT 163853 || | ||||| ||||| ||||| || || | ||||||||||||| || || || || Sbjct 17918 TTCTTAACAGCAGCTGTTTCAACTCCAGCGAATAGTATGGGTCATTCT-TTATTATTCCT 17860 Query 163854 CTGGGGTCCTGAGGCTCAGGGCGATTTCGTCCGCTGGATCCAACTTGGGGGACTCTGGAA 163913 ||||| || || ||||| ||||||||| || ||| |||||||| || || |||| Sbjct 17859 TTGGGGCCCAGAAGCTCAAGGCGATTTCACACGTTGGTGTCAACTTGGTGGTCTATGGAC 17800 Query 163914 TTTTGTGGCACTCCACGGAGCCTTTGCTCTCATTGGTTTCATGCTTCGGCAATTTGAACT 163973 ||||| || || ||||| || |||||||| |||||||| |||||||| || |||||| | Sbjct 17799 GTTTGTTGCTCTTCACGGTGCATTTGCTCTGATTGGTTTTATGCTTCGTCAGTTTGAAAT 17740 Query 163974 TGCTCGCCTGATTGGA-ATCAGACCCTACAATGCGATTGCTTTCTCTGGTCCTATTGCTG 164032 ||| || | | | | || | || ||||| || ||||| || || | || ||| ||| Sbjct 17739 TGCACG-TTCAGTAAAGATTCGCCCTTACAACGCAATTGCATTTTCAGCACCAATTTCTG 17681 Query 164033 TCTTCGTTAGTGTCTTTCTCATCTACCCTCTGGGTCAATCAAGTTGGTTCTTCGCTCCAT 164092 | |||||| ||| || | || |||||| | || ||||| |||||||||| || ||| Sbjct 17680 TATTCGTTTCTGTATTCTTAATTTACCCTTTAGGACAATCTGGTTGGTTCTTTGCACCAA 17621 Query 164093 CTTTTGGAGTGGCAGCAATCTTCAGATTCCTCTTATTCCTTCAAGGATTTCATAACTGGA 164152 ||||| || || ||||| ||| ||||| | |||||| | ||||| || |||||||||| Sbjct 17620 GCTTTGGTGTTGCTGCAATTTTCCGATTCATTTTATTCTTCCAAGGTTTCCATAACTGGA 17561 Query 164153 CTTTGAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGCGGAGCATTGCTATCTG 164212 |||| ||||| |||||||||||||| || || ||| |||| || | || | || | || Sbjct 17560 CTTTAAACCCTTTCCATATGATGGGTGTAGCGGGTGTACTTGGAGCTGCTCTACTTTGTG 17501 Query 164213 CTATTCACGGAGTCACAGTTGAAAATACATTGTATGAAGATGGAGAACAAGCAAACACCT 164272 | ||||| || | || || |||||||| | | ||| ||||| || |||||||| | Sbjct 17500 CAATTCATGGCGCAACTGTAGAAAATACGCTTTTTGAGGATGGTGATGGTGCAAACACAT 17441 Query 164273 TTAAGGCGTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGT 164318 | || ||| | | || || | ||||| || || || ||||| Sbjct 17440 TCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACATACTCAATGGT 17395 Score = 398 bits (440), Expect = 8e-106 Identities = 515/706 (73%), Gaps = 4/706 (1%) Strand=Plus/Minus Query 163615 GGGTGGTTTGATGTCCTGGATGACTGGCTTAAGCGCGATCGTTTCGTATTTATTGGTTGG 163674 || ||||||||||| | |||||||||||| || || |||||||| ||| | || ||| Sbjct 147543 GGTTGGTTTGATGTAGTAGATGACTGGCTTCGTCGTGACCGTTTCGTCTTTCTAGGATGG 147484 Query 163675 TCTGGATTACTACTTCTTCCCACTGCTTATATGGCAATTGGTGGCTGGCTTACTGGTACA 163734 || || ||| || | | || || || || ||||| ||||||| ||| |||| || || Sbjct 147483 TCAGGGTTATTATTATTGCCTACAGCATACCTGGCACTTGGTGGTTGGTTTACAGGAACT 147424 Query 163735 ACTTTCGTTACGTCGTGGTACACCCATGGACTGGCAACTTCCTATCTTGAGGGTGCTAAT 163794 || || || ||||| ||||| || ||||| | ||| |||| ||| | || || |||| Sbjct 147423 ACATTTGTAACGTCTTGGTATACTCATGGTTTAGCATCTTCATATTTAGAAGGATGTAAT 147364 Query 163795 TTTCTCACAGCGGCTGTGTCAACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTT-CT 163853 || | ||||| ||||| ||||| || || | ||||||||||||| || || || || Sbjct 147363 TTCTTAACAGCAGCTGTTTCAACTCCAGCGAATAGTATGGGTCATTCT-TTATTATTCCT 147305 Query 163854 CTGGGGTCCTGAGGCTCAGGGCGATTTCGTCCGCTGGATCCAACTTGGGGGACTCTGGAA 163913 ||||| || || ||||| ||||||||| || ||| |||||||| || || |||| Sbjct 147304 TTGGGGCCCAGAAGCTCAAGGCGATTTCACACGTTGGTGTCAACTTGGTGGTCTATGGAC 147245 Query 163914 TTTTGTGGCACTCCACGGAGCCTTTGCTCTCATTGGTTTCATGCTTCGGCAATTTGAACT 163973 ||||| || || ||||| || |||||||| |||||||| |||||||| || |||||| | Sbjct 147244 GTTTGTTGCTCTTCACGGTGCATTTGCTCTGATTGGTTTTATGCTTCGTCAGTTTGAAAT 147185 Query 163974 TGCTCGCCTGATTGGA-ATCAGACCCTACAATGCGATTGCTTTCTCTGGTCCTATTGCTG 164032 ||| || | | | | || | || ||||| || ||||| || || | || ||| ||| Sbjct 147184 TGCACG-TTCAGTAAAGATTCGCCCTTACAACGCAATTGCATTTTCAGCACCAATTTCTG 147126 Query 164033 TCTTCGTTAGTGTCTTTCTCATCTACCCTCTGGGTCAATCAAGTTGGTTCTTCGCTCCAT 164092 | |||||| ||| || | || |||||| | || ||||| |||||||||| || ||| Sbjct 147125 TATTCGTTTCTGTATTCTTAATTTACCCTTTAGGACAATCTGGTTGGTTCTTTGCACCAA 147066 Query 164093 CTTTTGGAGTGGCAGCAATCTTCAGATTCCTCTTATTCCTTCAAGGATTTCATAACTGGA 164152 ||||| || || ||||| ||| ||||| | |||||| | ||||| || |||||||||| Sbjct 147065 GCTTTGGTGTTGCTGCAATTTTCCGATTCATTTTATTCTTCCAAGGTTTCCATAACTGGA 147006 Query 164153 CTTTGAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGCGGAGCATTGCTATCTG 164212 |||| ||||| |||||||||||||| || || ||| |||| || | || | || | || Sbjct 147005 CTTTAAACCCTTTCCATATGATGGGTGTAGCGGGTGTACTTGGAGCTGCTCTACTTTGTG 146946 Query 164213 CTATTCACGGAGTCACAGTTGAAAATACATTGTATGAAGATGGAGAACAAGCAAACACCT 164272 | ||||| || | || || |||||||| | | ||| ||||| || |||||||| | Sbjct 146945 CAATTCATGGCGCAACTGTAGAAAATACGCTTTTTGAGGATGGTGATGGTGCAAACACAT 146886 Query 164273 TTAAGGCGTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGT 164318 | || ||| | | || || | ||||| || || || ||||| Sbjct 146885 TCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACATACTCAATGGT 146840 Score = 125 bits (138), Expect = 8e-24 Identities = 219/319 (69%), Gaps = 0/319 (0%) Strand=Plus/Minus Query 164320 ACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTGTTGCGTTTTCTAACAAGCGGTGGCTT 164379 |||||||| || |||||||| || || || ||||| || ||||| || || || ||| | Sbjct 16348 ACTGCAAATCGTTTCTGGTCACAAATTTTTGGTGTAGCTTTTTCAAATAAACGTTGGTTA 16289 Query 164380 CATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATT 164439 || || || ||||| ||||| || || | ||||| |||| | ||||| | | Sbjct 16288 CACTTCTTTATGTTATTTGTTCCGGTAACTGGTCTTTGGATGAGTGCAATTGGTGTAGTA 16229 Query 164440 GGCCTTGCTCTCAATCTTCGTGCTTACGATTTTGTAAGTCAAGAGATTAGAGCAGCAGAA 164499 || | ||| | || | ||||| || ||||| || ||||| ||| | || || ||| Sbjct 16228 GGTTTAGCTTTAAACTTACGTGCGTATGATTTCGTTTCACAAGAAATTCGCGCTGCGGAA 16169 Query 164500 GATCCTGAGTTCGAGACTTTCTATACCAAGAACATCTTATTGAACGAAGGACTCCGTGCA 164559 |||||||| || || ||||||||||| || || || | || |||||||| | ||||| Sbjct 16168 GATCCTGAATTTGAAACTTTCTATACAAAAAATATTCTTTTAAACGAAGGTATTCGTGCT 16109 Query 164560 TGGTTAGCACCAGTTGACCAGCCAGGAGAACGGTTTGTCTTCCCAGAAGAAGTACTGCCG 164619 ||| | || | || ||||| ||| |||| ||||| || || || | || Sbjct 16108 TGGATGGCTGCTCAAGATCAGCCTCATGAAAAACTTGTATTCCCTGAGGAGGTTTTACCA 16049 Query 164620 AGAGGTAATGCGCTTTAAT 164638 | || || || ||||||| Sbjct 16048 CGTGGAAACGCTCTTTAAT 16030 Score = 125 bits (138), Expect = 8e-24 Identities = 219/319 (69%), Gaps = 0/319 (0%) Strand=Plus/Minus Query 164320 ACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTGTTGCGTTTTCTAACAAGCGGTGGCTT 164379 |||||||| || |||||||| || || || ||||| || ||||| || || || ||| | Sbjct 145793 ACTGCAAATCGTTTCTGGTCACAAATTTTTGGTGTAGCTTTTTCAAATAAACGTTGGTTA 145734 Query 164380 CATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATT 164439 || || || ||||| ||||| || || | ||||| |||| | ||||| | | Sbjct 145733 CACTTCTTTATGTTATTTGTTCCGGTAACTGGTCTTTGGATGAGTGCAATTGGTGTAGTA 145674 Query 164440 GGCCTTGCTCTCAATCTTCGTGCTTACGATTTTGTAAGTCAAGAGATTAGAGCAGCAGAA 164499 || | ||| | || | ||||| || ||||| || ||||| ||| | || || ||| Sbjct 145673 GGTTTAGCTTTAAACTTACGTGCGTATGATTTCGTTTCACAAGAAATTCGCGCTGCGGAA 145614 Query 164500 GATCCTGAGTTCGAGACTTTCTATACCAAGAACATCTTATTGAACGAAGGACTCCGTGCA 164559 |||||||| || || ||||||||||| || || || | || |||||||| | ||||| Sbjct 145613 GATCCTGAATTTGAAACTTTCTATACAAAAAATATTCTTTTAAACGAAGGTATTCGTGCT 145554 Query 164560 TGGTTAGCACCAGTTGACCAGCCAGGAGAACGGTTTGTCTTCCCAGAAGAAGTACTGCCG 164619 ||| | || | || ||||| ||| |||| ||||| || || || | || Sbjct 145553 TGGATGGCTGCTCAAGATCAGCCTCATGAAAAACTTGTATTCCCTGAGGAGGTTTTACCA 145494 Query 164620 AGAGGTAATGCGCTTTAAT 164638 | || || || ||||||| Sbjct 145493 CGTGGAAACGCTCTTTAAT 145475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557581902090200