Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_015286.1 Length=175230 Score E Sequences producing significant alignments: (Bits) Value seq52 722 0.0 >seq52 Length=149364 Score = 722 bits (800), Expect = 0.0 Identities = 756/998 (76%), Gaps = 12/998 (1%) Strand=Plus/Minus Query 167088 TTTTGCGATTGGGTTACCAGCACTAACAACCGTCTGTATGTCGGTTGGTTCGGCGTTCTG 167147 ||||| || ||||| || |||||| | |||||| | || |||||||||| || || | Sbjct 86189 TTTTGTGAGTGGGTAACTAGCACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTGTTA 86130 Query 167148 ATGATCCCTACGTTGCTTGCAGCAACCATCTGT-TTCATCATCGCCTTCGTCGGTGCTCC 167206 ||||||||||| || | |||| || || || || |||||||| || ||| ||||| Sbjct 86129 ATGATCCCTACTTTATTAACAGCTACT-TCAGTATTTATCATCGCATTTATCGCAGCTCC 86071 Query 167207 TCCTGTGGACATCGATGGTATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACAA 167266 ||||| || |||||||||||||| || || ||| | |||||| | | ||||| ||||| Sbjct 86070 GCCTGTCGATATCGATGGTATCCGTGAGCCTGTTTCAGGTTCATTACTATATGGAAACAA 86011 Query 167267 CATCATCTCTGGTGCAGTTGTTCCTTCTTCTAATGCTATTGGTCTTCACTTCTATCCCAT 167326 |||||| ||||||| || |||| ||||||| ||||| ||| | |||||||| || || Sbjct 86010 TATCATCACTGGTGCTATTATTCCAACTTCTAACGCTATCGGTTTACACTTCTACCCAAT 85951 Query 167327 CTGGGAAGCAGCAACCCTCGACGAGTGGTTGTACAATGGTGGTCCTTTCCAACTCGTAGT 167386 ||||||||||| | || || |||||||| |||||||||||||||| |||||| | || Sbjct 85950 TTGGGAAGCAGCTTCTCTTGATGAGTGGTTATACAATGGTGGTCCTTACCAACTTATCGT 85891 Query 167387 TTTCCACTTCCTGATTGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACCG 167446 || ||| ||| | | ||| | | | | || |||||||||||||||||| | |||| || Sbjct 85890 TTGCCATTTCTTCTTAGGCGTTTGTTCATACATGGGTCGTGAGTGGGAATTATCTTTTCG 85831 Query 167447 TCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCAGCATCTGC 167506 | | ||||||||||| |||||| ||||| ||||| || ||||| |||||||| | || Sbjct 85830 TTTAGGTATGCGTCCTTGGATCGCAGTTGCTTACTCAGCACCAGTTGCTGCAGCTACAGC 85771 Query 167507 TGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCGATGCCTCTTGGTAT 167566 ||||||| || | ||||| |||||||||||||||||||||| | |||||| | ||||| Sbjct 85770 TGTATTCATCATTTATCCAATCGGTCAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTAT 85711 Query 167567 CTCTGGTACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCC 167626 ||||||||| ||||||| |||| | || |||||||| |||||||||||||| |||||||| Sbjct 85710 CTCTGGTACTTTCAACTTCATGATCGTATTCCAAGCTGAGCACAACATCCTTATGCACCC 85651 Query 167627 CTTCCATATGCTCGGCGTTGCTGGCGTATTCGGCGGTTCTCTGTTCAGTGCAATGCACGG 167686 ||||||||||| || |||||||| ||||| || ||||| | ||| ||| |||||||| Sbjct 85650 ATTCCATATGCTTGGTGTTGCTGGTGTATTTGGTGGTTCATTATTCTCTGCTATGCACGG 85591 Query 167687 TTCTCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAACTGAGTCCCAGAACTATGG 167746 ||| || || || ||||| | |||||||||| || |||| || || ||| | || Sbjct 85590 TTCACTTGTAACTTCTTCTTTAATTCGTGAAACAACTGAAAACGAATCAGCTAACGAAGG 85531 Query 167747 TTACAAGTTCGGTCAGGAAGAAGAGACGTATAACATCGTCGCTGCTCATGGTTACTTCGG 167806 |||||| |||||||| |||||||| || || |||||||| || |||||||| |||||||| Sbjct 85530 TTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCATGGCTACTTCGG 85471 Query 167807 TCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGCTCGCTGCACTTCTTCTTGGC 167866 ||| | || |||||||| || || ||||||||||| || || | || |||||||| || Sbjct 85470 TCGTTTAATTTTCCAATATGCTTCTTTCAACAACTCTCGTTCATTACATTTCTTCTTAGC 85411 Query 167867 AGCATGGCCTGTTGTTGGTATCTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCAA 167926 || ||||| ||||||||||| |||| |||||| Sbjct 85410 TGCTTGGCCAGTTGTTGGTATTTGGTTCACTGCTTTAGGTATTTCAACTATGGCATTCAA 85351 Query 167927 CCTGAACGGTTTCAACTTCAACCAGTCTATCCTTGAT-----AGTTCTGGTAAGGTTCTG 167981 | | || ||||||||||||||||| || | | ||| || || |||| || Sbjct 85350 CTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAAGGTCGTGTAA---TCAA 85294 Query 167982 CCTACTTGGGCAGACGTGCTCAACCGTGCTGGTCTGGGTATGGAAGTTATGCACGAGCGT 168041 | |||||||||||| | |||||||||| || ||||||||||| ||||| |||||| Sbjct 85293 C--ACTTGGGCAGACATTATCAACCGTGCCAACCTTGGTATGGAAGTAATGCATGAGCGT 85236 Query 168042 AATGCTCACAACTTCCCTCTCGACCTTGCTGCTGCTGA 168079 || |||||||||||||| | || | |||| || ||| Sbjct 85235 AACGCTCACAACTTCCCATTAGATTTAGCTGTTGTTGA 85198 Score = 369 bits (408), Expect = 4e-97 Identities = 512/709 (72%), Gaps = 6/709 (1%) Strand=Plus/Minus Query 168477 GGGTGGTTCGATGTCCTCGATGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGTTGG 168536 || ||||| ||||| | |||||||||||| || || |||||||| ||| | || ||| Sbjct 18098 GGTTGGTTTGATGTAGTAGATGACTGGCTTCGTCGTGACCGTTTCGTCTTTCTAGGATGG 18039 Query 168537 TCTGGACTTCTTCTTTTTCCC-ACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGAC 168595 || || || || || || || || || || || || |||| |||||| |||| || || Sbjct 18038 TCAGGG-TTATTATTATTGCCTACAGCATACCTGGCACTTGGTGGTTGGTTTACAGGAAC 17980 Query 168596 TGCTTTCGTCACGAGTTGGTATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGCGCAAA 168655 | | || || ||| |||||||||||| || || ||| ||| ||| | || || || Sbjct 17979 TACATTTGTAACGTCTTGGTATACTCATGGTTTAGCATCTTCATATTTAGAAGGATGTAA 17920 Query 168656 CTTTCTTA-CTGCGGCAGTTAGTACTCCAGCAGATTCTATGGGTCATTCTCTTCTGCTTC 168714 ||||||| | || || ||| |||||||| || ||||||||||||| | | | | Sbjct 17919 -TTTCTTAACAGCAGCTGTTTCAACTCCAGCGAATAGTATGGGTCATTCTTTATTATTCC 17861 Query 168715 TCTGGGGTCCTGAGGCACAAGGGGATTTCGTCAGATGGTGTCAACTTGGAGGACTCTGGG 168774 | ||||| || || || ||||| |||||| | |||||||||||||| || || ||| Sbjct 17860 TTTGGGGCCCAGAAGCTCAAGGCGATTTCACACGTTGGTGTCAACTTGGTGGTCTATGGA 17801 Query 168775 CTTTTGTGGCGCTCCACGGGGCTTTCGCTCTAATCGGTTTCATGCTTCGTCAGTTTGAAC 168834 | ||||| || || ||||| || || ||||| || ||||| |||||||||||||||||| Sbjct 17800 CGTTTGTTGCTCTTCACGGTGCATTTGCTCTGATTGGTTTTATGCTTCGTCAGTTTGAAA 17741 Query 168835 TGGCACGTCTCA-TCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCT 168893 | |||||| ||| | || || || ||||| || ||||| || || | || || || Sbjct 17740 TTGCACGT-TCAGTAAAGATTCGCCCTTACAACGCAATTGCATTTTCAGCACCAATTTCT 17682 Query 168894 GTTTTTGTTAGCGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCA 168953 || || ||| || || | || |||||| | || ||||| ||||||| || || ||| Sbjct 17681 GTATTCGTTTCTGTATTCTTAATTTACCCTTTAGGACAATCTGGTTGGTTCTTTGCACCA 17622 Query 168954 TCTTTCGGGGTCTCAGCAATCTTCCGATTCCTTCTCTTCCTACAAGGATTCCATAACTGG 169013 || || || | ||||| ||||||||| || | ||| | ||||| |||||||||||| Sbjct 17621 AGCTTTGGTGTTGCTGCAATTTTCCGATTCATTTTATTCTTCCAAGGTTTCCATAACTGG 17562 Query 169014 ACACTGAATCCATTTCATATGATGGGTGTAGCAGGTATTTTGGGAGGAGCCTTGCTTTCT 169073 || | || || || ||||||||||||||||| ||| | | |||| || | |||| | Sbjct 17561 ACTTTAAACCCTTTCCATATGATGGGTGTAGCGGGTGTACTTGGAGCTGCTCTACTTTGT 17502 Query 169074 GCCATTCATGGTGTTACAGTAGAGAATACTCTGTATCAAGATGGTGAACAAGCAAATACT 169133 || |||||||| | || ||||| ||||| || | | | |||||||| ||||| || Sbjct 17501 GCAATTCATGGCGCAACTGTAGAAAATACGCTTTTTGAGGATGGTGATGGTGCAAACACA 17442 Query 169134 TTCAAAGCATTTGACAGCACTCAGGAAGAGGAGACCTATTCAATGGTTA 169182 ||| || ||| || ||||| | || || || || |||||||||| Sbjct 17441 TTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACATACTCAATGGTTA 17393 Score = 369 bits (408), Expect = 4e-97 Identities = 512/709 (72%), Gaps = 6/709 (1%) Strand=Plus/Minus Query 168477 GGGTGGTTCGATGTCCTCGATGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGTTGG 168536 || ||||| ||||| | |||||||||||| || || |||||||| ||| | || ||| Sbjct 147543 GGTTGGTTTGATGTAGTAGATGACTGGCTTCGTCGTGACCGTTTCGTCTTTCTAGGATGG 147484 Query 168537 TCTGGACTTCTTCTTTTTCCC-ACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGAC 168595 || || || || || || || || || || || || |||| |||||| |||| || || Sbjct 147483 TCAGGG-TTATTATTATTGCCTACAGCATACCTGGCACTTGGTGGTTGGTTTACAGGAAC 147425 Query 168596 TGCTTTCGTCACGAGTTGGTATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGCGCAAA 168655 | | || || ||| |||||||||||| || || ||| ||| ||| | || || || Sbjct 147424 TACATTTGTAACGTCTTGGTATACTCATGGTTTAGCATCTTCATATTTAGAAGGATGTAA 147365 Query 168656 CTTTCTTA-CTGCGGCAGTTAGTACTCCAGCAGATTCTATGGGTCATTCTCTTCTGCTTC 168714 ||||||| | || || ||| |||||||| || ||||||||||||| | | | | Sbjct 147364 -TTTCTTAACAGCAGCTGTTTCAACTCCAGCGAATAGTATGGGTCATTCTTTATTATTCC 147306 Query 168715 TCTGGGGTCCTGAGGCACAAGGGGATTTCGTCAGATGGTGTCAACTTGGAGGACTCTGGG 168774 | ||||| || || || ||||| |||||| | |||||||||||||| || || ||| Sbjct 147305 TTTGGGGCCCAGAAGCTCAAGGCGATTTCACACGTTGGTGTCAACTTGGTGGTCTATGGA 147246 Query 168775 CTTTTGTGGCGCTCCACGGGGCTTTCGCTCTAATCGGTTTCATGCTTCGTCAGTTTGAAC 168834 | ||||| || || ||||| || || ||||| || ||||| |||||||||||||||||| Sbjct 147245 CGTTTGTTGCTCTTCACGGTGCATTTGCTCTGATTGGTTTTATGCTTCGTCAGTTTGAAA 147186 Query 168835 TGGCACGTCTCA-TCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCT 168893 | |||||| ||| | || || || ||||| || ||||| || || | || || || Sbjct 147185 TTGCACGT-TCAGTAAAGATTCGCCCTTACAACGCAATTGCATTTTCAGCACCAATTTCT 147127 Query 168894 GTTTTTGTTAGCGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCA 168953 || || ||| || || | || |||||| | || ||||| ||||||| || || ||| Sbjct 147126 GTATTCGTTTCTGTATTCTTAATTTACCCTTTAGGACAATCTGGTTGGTTCTTTGCACCA 147067 Query 168954 TCTTTCGGGGTCTCAGCAATCTTCCGATTCCTTCTCTTCCTACAAGGATTCCATAACTGG 169013 || || || | ||||| ||||||||| || | ||| | ||||| |||||||||||| Sbjct 147066 AGCTTTGGTGTTGCTGCAATTTTCCGATTCATTTTATTCTTCCAAGGTTTCCATAACTGG 147007 Query 169014 ACACTGAATCCATTTCATATGATGGGTGTAGCAGGTATTTTGGGAGGAGCCTTGCTTTCT 169073 || | || || || ||||||||||||||||| ||| | | |||| || | |||| | Sbjct 147006 ACTTTAAACCCTTTCCATATGATGGGTGTAGCGGGTGTACTTGGAGCTGCTCTACTTTGT 146947 Query 169074 GCCATTCATGGTGTTACAGTAGAGAATACTCTGTATCAAGATGGTGAACAAGCAAATACT 169133 || |||||||| | || ||||| ||||| || | | | |||||||| ||||| || Sbjct 146946 GCAATTCATGGCGCAACTGTAGAAAATACGCTTTTTGAGGATGGTGATGGTGCAAACACA 146887 Query 169134 TTCAAAGCATTTGACAGCACTCAGGAAGAGGAGACCTATTCAATGGTTA 169182 ||| || ||| || ||||| | || || || || |||||||||| Sbjct 146886 TTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACATACTCAATGGTTA 146838 Score = 201 bits (222), Expect = 1e-46 Identities = 233/314 (74%), Gaps = 0/314 (0%) Strand=Plus/Minus Query 169182 ACTGCAAACCGTTTCTGGTCTCAGATCTTTGGTATTGCGTTCAGTAATAAGAGGTGGTTG 169241 |||||||| ||||||||||| || || |||||| | || || ||||| | ||||| Sbjct 16348 ACTGCAAATCGTTTCTGGTCACAAATTTTTGGTGTAGCTTTTTCAAATAAACGTTGGTTA 16289 Query 169242 CATTTCTTTATGCTGTTTGTTCCTGTTATGGGTCTTTGGACAAGTTCCATCGGTATTATT 169301 || ||||||||| | |||||||| || | |||||||||| ||| | || ||| | | Sbjct 16288 CACTTCTTTATGTTATTTGTTCCGGTAACTGGTCTTTGGATGAGTGCAATTGGTGTAGTA 16229 Query 169302 GGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAGATCAGAGCAGCAGAA 169361 ||| | ||| | ||| | ||||| ||||| || ||||| ||||| || | || || ||| Sbjct 16228 GGTTTAGCTTTAAACTTACGTGCGTATGATTTCGTTTCACAAGAAATTCGCGCTGCGGAA 16169 Query 169362 GATCCAGAGTTTGAGACGTTCTACACCAAGAACATCCTCTTGAACGAAGGTCTTCGTGCA 169421 ||||| || ||||| || ||||| || || || || || || ||||||||| ||||||| Sbjct 16168 GATCCTGAATTTGAAACTTTCTATACAAAAAATATTCTTTTAAACGAAGGTATTCGTGCT 16109 Query 169422 TGGTTAGCACCTATTGATCAACCTCATGAGAACTTTGTGTTCCCTGAGGAAGTACTTCCC 169481 ||| | || || ||||| |||||||| || |||| ||||||||||| || | || Sbjct 16108 TGGATGGCTGCTCAAGATCAGCCTCATGAAAAACTTGTATTCCCTGAGGAGGTTTTACCA 16049 Query 169482 CGAGGTAATGCCCT 169495 || || || || || Sbjct 16048 CGTGGAAACGCTCT 16035 Score = 201 bits (222), Expect = 1e-46 Identities = 233/314 (74%), Gaps = 0/314 (0%) Strand=Plus/Minus Query 169182 ACTGCAAACCGTTTCTGGTCTCAGATCTTTGGTATTGCGTTCAGTAATAAGAGGTGGTTG 169241 |||||||| ||||||||||| || || |||||| | || || ||||| | ||||| Sbjct 145793 ACTGCAAATCGTTTCTGGTCACAAATTTTTGGTGTAGCTTTTTCAAATAAACGTTGGTTA 145734 Query 169242 CATTTCTTTATGCTGTTTGTTCCTGTTATGGGTCTTTGGACAAGTTCCATCGGTATTATT 169301 || ||||||||| | |||||||| || | |||||||||| ||| | || ||| | | Sbjct 145733 CACTTCTTTATGTTATTTGTTCCGGTAACTGGTCTTTGGATGAGTGCAATTGGTGTAGTA 145674 Query 169302 GGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAGATCAGAGCAGCAGAA 169361 ||| | ||| | ||| | ||||| ||||| || ||||| ||||| || | || || ||| Sbjct 145673 GGTTTAGCTTTAAACTTACGTGCGTATGATTTCGTTTCACAAGAAATTCGCGCTGCGGAA 145614 Query 169362 GATCCAGAGTTTGAGACGTTCTACACCAAGAACATCCTCTTGAACGAAGGTCTTCGTGCA 169421 ||||| || ||||| || ||||| || || || || || || ||||||||| ||||||| Sbjct 145613 GATCCTGAATTTGAAACTTTCTATACAAAAAATATTCTTTTAAACGAAGGTATTCGTGCT 145554 Query 169422 TGGTTAGCACCTATTGATCAACCTCATGAGAACTTTGTGTTCCCTGAGGAAGTACTTCCC 169481 ||| | || || ||||| |||||||| || |||| ||||||||||| || | || Sbjct 145553 TGGATGGCTGCTCAAGATCAGCCTCATGAAAAACTTGTATTCCCTGAGGAGGTTTTACCA 145494 Query 169482 CGAGGTAATGCCCT 169495 || || || || || Sbjct 145493 CGTGGAAACGCTCT 145480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560605890712400