Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_015287.1 Length=232878 Score E Sequences producing significant alignments: (Bits) Value seq52 746 0.0 >seq52 Length=149364 Score = 746 bits (826), Expect = 0.0 Identities = 761/993 (77%), Gaps = 0/993 (0%) Strand=Plus/Minus Query 215294 TTTTGTGAGTGGGTTACTTCTACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTC 215353 |||||||||||||| ||| ||||| || ||| | ||| | |||||||||||||| | Sbjct 86189 TTTTGTGAGTGGGTAACTAGCACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTGTTA 86130 Query 215354 ATGATTCCTTGCCTCCTCGCAGCTACCACTTGTTTCATCGTAGCATTCATCGCTGCACCT 215413 ||||| ||| | | ||||||| | || ||| | ||||| ||||| || || Sbjct 86129 ATGATCCCTACTTTATTAACAGCTACTTCAGTATTTATCATCGCATTTATCGCAGCTCCG 86070 Query 215414 CCTGTCGATATCGACGGAATCAGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAAC 215473 |||||||||||||| || ||| | ||||| ||| | ||||| ||| | ||||| ||||| Sbjct 86069 CCTGTCGATATCGATGGTATCCGTGAGCCTGTTTCAGGTTCATTACTATATGGAAACAAT 86010 Query 215474 ATCATCTCTGGTGCTGTTGTACCTAGTTCAAACGCAATCGGATTACACTTCTACCCTATC 215533 |||||| |||||||| || | || | ||| ||||| ||||| |||||||||||||| || Sbjct 86009 ATCATCACTGGTGCTATTATTCCAACTTCTAACGCTATCGGTTTACACTTCTACCCAATT 85950 Query 215534 TGGGAAGCAGCAACAGTTGACGAATGGCTCTACAATGGTGGACCTTTCCAACTGGTTATC 215593 ||||||||||| | |||| || ||| | ||||||||||| |||| |||||| | | Sbjct 85949 TGGGAAGCAGCTTCTCTTGATGAGTGGTTATACAATGGTGGTCCTTACCAACTTATCGTT 85890 Query 215594 TTCCACTTCCTCATTGGTATTTCTGCATACTGCGGAAGACAGTGGGAACTTTCTTACAGA 215653 | ||| ||| || | || ||| | ||||| || | |||||||| | |||| | Sbjct 85889 TGCCATTTCTTCTTAGGCGTTTGTTCATACATGGGTCGTGAGTGGGAATTATCTTTTCGT 85830 Query 215654 TTAGGTATGAGACCTTGGATCTGTGTTGCTTACTCCGCACCTGTATCTGCTGCCTTTGCA 215713 ||||||||| | ||||||||| ||||||||||| ||||| || |||| || || Sbjct 85829 TTAGGTATGCGTCCTTGGATCGCAGTTGCTTACTCAGCACCAGTTGCTGCAGCTACAGCT 85770 Query 215714 GTATTCCTTGTGTATCCATTCGGTCAGGGTTCTTTCTCTGATGCTATGCCACTTGGAATC 215773 |||||| | | |||||| ||||||| |||||||||||||||| |||||| | || ||| Sbjct 85769 GTATTCATCATTTATCCAATCGGTCAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTATC 85710 Query 215774 TCTGGAACATTCAACTACATGTTTGTTTTCCAGGCTGAGCACAACATTCTGATGCACCCA 215833 ||||| || ||||||| |||| | || ||||| |||||||||||||| || ||||||||| Sbjct 85709 TCTGGTACTTTCAACTTCATGATCGTATTCCAAGCTGAGCACAACATCCTTATGCACCCA 85650 Query 215834 TTCCACATGTTAGGTGTGGCTGGTGTCTTCGGTGGTTCATTGTTCTCTGCAATGCACGGT 215893 ||||| ||| | ||||| |||||||| || ||||||||||| |||||||| ||||||||| Sbjct 85649 TTCCATATGCTTGGTGTTGCTGGTGTATTTGGTGGTTCATTATTCTCTGCTATGCACGGT 85590 Query 215894 TCACTTGTTACATCTTCTCTAATCAGAGAGACAACTGAGCAAGAATCTCAGAACTACGGT 215953 |||||||| || |||||| |||| | || |||||||| | ||||| ||| | ||| Sbjct 85589 TCACTTGTAACTTCTTCTTTAATTCGTGAAACAACTGAAAACGAATCAGCTAACGAAGGT 85530 Query 215954 TACAAGTTCGGACAAGAGGAGGAAACATACAACATCGTAGCTGCACACGGTTACTTTGGT 216013 ||||| ||||| ||||| || ||||| ||||||||||| || || || || ||||| ||| Sbjct 85529 TACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCATGGCTACTTCGGT 85470 Query 216014 CGCCTCATCTTCCAATACGCATCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCA 216073 || | || |||||||| || |||||||||||||| | | || |||||| | || Sbjct 85469 CGTTTAATTTTCCAATATGCTTCTTTCAACAACTCTCGTTCATTACATTTCTTCTTAGCT 85410 Query 216074 GCATTCCCTGTTATTTGTATCTGGGCAACTGCAATGGGTGTCTCAACTATGGCGTTCAAC 216133 || | || ||| || |||| ||| ||||| | ||| | ||||||||||| |||||| Sbjct 85409 GCTTGGCCAGTTGTTGGTATTTGGTTCACTGCTTTAGGTATTTCAACTATGGCATTCAAC 85350 Query 216134 CTTAACGGTTTCAACTTCAACCAGTCTGTCGTAGACGCATCTGGTAAAGTTATTCCTACT 216193 | || ||||||||||||||||| || || ||||| || ||| || || ||| Sbjct 85349 TTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAAGGTCGTGTAATCAACACT 85290 Query 216194 TGGGCAGACGTTCTTAACAGAGCAGGACTTGGTATGGAAGTAATGCACGAGCGTAACGCT 216253 ||||||||| || | ||| | || |||||||||||||||||||| |||||||||||| Sbjct 85289 TGGGCAGACATTATCAACCGTGCCAACCTTGGTATGGAAGTAATGCATGAGCGTAACGCT 85230 Query 216254 CACAACTTCCCATTAGACTTGGCTGCTGCTGAA 216286 ||||||||||||||||| || |||| || |||| Sbjct 85229 CACAACTTCCCATTAGATTTAGCTGTTGTTGAA 85197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 745078796630480