Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_015288.1 Length=191195 Score E Sequences producing significant alignments: (Bits) Value seq52 787 0.0 >seq52 Length=149364 Score = 787 bits (872), Expect = 0.0 Identities = 772/993 (78%), Gaps = 2/993 (0%) Strand=Plus/Minus Query 181794 TTCTGCGAGTGGGTTACATCTACCAACAATCGTCTCTATGTCGGTTGGTTTGGTGTGCTG 181853 || || |||||||| || || | || ||| | || ||||||||||||||||| | Sbjct 86189 TTTTGTGAGTGGGTAACTAGCACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTGTTA 86130 Query 181854 ATGATCCCAACTCTGTTGGCGGCAACCATCTGT-TTCATCGTTGCTTTCGTAGCAGCACC 181912 |||||||| ||| | || | || || || || || ||| | || || | ||||| || Sbjct 86129 ATGATCCCTACTTTATTAACAGCTACT-TCAGTATTTATCATCGCATTTATCGCAGCTCC 86071 Query 181913 TCCTGTCGATATCGACGGTATCCGCGAACCCGTAGCTGGTTCACTCATGTATGGTAACAA 181972 |||||||||||||| |||||||| || || || | |||||| | | ||||| ||||| Sbjct 86070 GCCTGTCGATATCGATGGTATCCGTGAGCCTGTTTCAGGTTCATTACTATATGGAAACAA 86011 Query 181973 CATCATCTCTGGTGCTGTTGTCCCATCCTCCAACGCAATTGGTCTTCACTTCTACCCAAT 182032 |||||| |||||||| || | ||| | || ||||| || ||| | |||||||||||||| Sbjct 86010 TATCATCACTGGTGCTATTATTCCAACTTCTAACGCTATCGGTTTACACTTCTACCCAAT 85951 Query 182033 CTGGGAAGCTGCCTCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTGGTTGT 182092 |||||||| || || |||||||||||| | || || |||||||||| |||||| | || Sbjct 85950 TTGGGAAGCAGCTTCTCTTGATGAGTGGTTATACAATGGTGGTCCTTACCAACTTATCGT 85891 Query 182093 TTTCCACTTCCTGATCGGCATCTACGCCTACATGGGACGTGAGTGGGAACTTTCTTACCG 182152 || ||| ||| | | ||| | | | |||||||| |||||||||||| | |||| || Sbjct 85890 TTGCCATTTCTTCTTAGGCGTTTGTTCATACATGGGTCGTGAGTGGGAATTATCTTTTCG 85831 Query 182153 CTTAGGTATGCGTCCCTGGATCTGTGTAGCATACTCTGCTCCAGTCGCTGCAGCATCTGC 182212 |||||||||||||| |||||| || || ||||| || ||||| |||||||| | || Sbjct 85830 TTTAGGTATGCGTCCTTGGATCGCAGTTGCTTACTCAGCACCAGTTGCTGCAGCTACAGC 85771 Query 182213 TGTATTCTTAGTCTATCCTTTCGGTCAAGGTTCGTTCTCCGATGCAATGCCCCTCGGAAT 182272 ||||||| | | ||||| ||||||||||||| ||||| |||| ||||| | || || Sbjct 85770 TGTATTCATCATTTATCCAATCGGTCAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTAT 85711 Query 182273 CTCAGGAACATTCAACTATATGTTGGTTTTCCAAGCTGAGCACAACATTCTTATGCATCC 182332 ||| || || ||||||| ||| | || |||||||||||||||||||| |||||||| || Sbjct 85710 CTCTGGTACTTTCAACTTCATGATCGTATTCCAAGCTGAGCACAACATCCTTATGCACCC 85651 Query 182333 CTTCCACATGTTGGGTGTAGCAGGTGTATTCGGTGGTTCACTGTTTAGTGCAATGCACGG 182392 ||||| ||| | ||||| || |||||||| ||||||||| | || ||| |||||||| Sbjct 85650 ATTCCATATGCTTGGTGTTGCTGGTGTATTTGGTGGTTCATTATTCTCTGCTATGCACGG 85591 Query 182393 TTCTTTGGTTACATCTTCACTCGTCCGTGAGACGACTGAGCAAGAGTCACAGAACTATGG 182452 ||| | || || ||||| | | ||||| || ||||| | || ||| ||| | || Sbjct 85590 TTCACTTGTAACTTCTTCTTTAATTCGTGAAACAACTGAAAACGAATCAGCTAACGAAGG 85531 Query 182453 TTACAAGTTCGGTCAAGAAGAAGAGACCTATAACATCGTTGCAGCCCATGGCTACTTCGG 182512 |||||| ||||||||||||||||| || || |||||||||||||| |||||||||||||| Sbjct 85530 TTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCATGGCTACTTCGG 85471 Query 182513 TCGTTTGATCTTCCAATACGCATCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGC 182572 |||||| || |||||||| || || ||||||||||| ||||| || || |||||| | || Sbjct 85470 TCGTTTAATTTTCCAATATGCTTCTTTCAACAACTCTCGTTCATTACATTTCTTCTTAGC 85411 Query 182573 TGCATGGCCTGTTGTTGGAATCTGGTTCACCGCACTTGGTGTCTCCACGATGGCATTCAA 182632 ||| ||||| |||||||| || |||||||| || | ||| | || || ||||||||||| Sbjct 85410 TGCTTGGCCAGTTGTTGGTATTTGGTTCACTGCTTTAGGTATTTCAACTATGGCATTCAA 85351 Query 182633 CCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTCCTTAACAC 182692 | | || ||||||||||||||||| || | | ||| || |||||||| | ||||| Sbjct 85350 CTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAAGGTCGTGTAATCAACAC 85291 Query 182693 TTGGGCAGATGTATTGAACCGTGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGC 182752 ||||||||| | | |||||||| |||||||||||||| ||||||||||||||||| Sbjct 85290 TTGGGCAGACATTATCAACCGTGCCAACCTTGGTATGGAAGTAATGCATGAGCGTAACGC 85231 Query 182753 ACACAACTTCCCACTAGATCTTGCTGCTGCTGA 182785 |||||||||||| ||||| | |||| || ||| Sbjct 85230 TCACAACTTCCCATTAGATTTAGCTGTTGTTGA 85198 Score = 416 bits (460), Expect = 3e-111 Identities = 525/715 (73%), Gaps = 6/715 (1%) Strand=Plus/Minus Query 183168 AACGAGGGGGTGGTTCGATGTCCTTGATGACTGGGTTAAACGCGATCGCTTTGTCTTTGT 183227 ||||||| ||||| ||||| | ||||||||| || || || || || |||||| | Sbjct 18103 AACGAGGT--TGGTTTGATGTAGTAGATGACTGGCTTCGTCGTGACCGTTTCGTCTTTCT 18046 Query 183228 GGGCTGGTCTGGACTCCTACTTCTTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTAC 183287 || ||||| || | || | | || || || || || || |||| |||||| |||| Sbjct 18045 AGGATGGTCAGGGTTATTATTATTGCCTACAGCATACCTGGCACTTGGTGGTTGGTTTAC 17986 Query 183288 TGGCACAGCTTTTGTTACGAGTTGGTATACCCATGGACTTGCTTCTTCCTATCTTGAAGG 183347 || || | ||||| ||| ||||||||| ||||| | || ||||| ||| | ||||| Sbjct 17985 AGGAACTACATTTGTAACGTCTTGGTATACTCATGGTTTAGCATCTTCATATTTAGAAGG 17926 Query 183348 TGCTAACTTTCTTA-CGGCAGCTGTCTCGACGCCTGCTGACGCTATGGGTCATTCTCTTC 183406 ||| ||||||| | |||||||| || || || || | ||||||||||||| | Sbjct 17925 ATGTAA-TTTCTTAACAGCAGCTGTTTCAACTCCAGCGAATAGTATGGGTCATTCTTTAT 17867 Query 183407 TGTTACTTTGGGGTCCTGAGTCTCAAGGGGACTTTCA-ACGCTGGTGCCAACTTGGGGGA 183465 | || |||||||| || || ||||||| || ||||| ||| ||||| |||||||| || Sbjct 17866 TATTCCTTTGGGGCCCAGAAGCTCAAGGCGA-TTTCACACGTTGGTGTCAACTTGGTGGT 17808 Query 183466 CTCTGGAATTTTGTGGCACTCCACGGTGCCTTTGCTCTCATTGGTTTCATGCTTCGACAG 183525 || |||| ||||| || || |||||||| |||||||| |||||||| |||||||| ||| Sbjct 17807 CTATGGACGTTTGTTGCTCTTCACGGTGCATTTGCTCTGATTGGTTTTATGCTTCGTCAG 17748 Query 183526 TTTGAACTTGCTCGCTTGATTGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCT 183585 |||||| |||| || | | || || |||||||| || ||||| || || | || Sbjct 17747 TTTGAAATTGCACGTTCAGTAAAGATTCGCCCTTACAACGCAATTGCATTTTCAGCACCA 17688 Query 183586 ATTGCTGTTTTTGTCAGTGTATTCCTTATCTATCCACTGGGTCAGTCTTCATGGTTCTTT 183645 ||| |||| || || ||||||| | || || || | || || ||| ||||||||| Sbjct 17687 ATTTCTGTATTCGTTTCTGTATTCTTAATTTACCCTTTAGGACAATCTGGTTGGTTCTTT 17628 Query 183646 GCACCTAGTTTCGGGGTAGCAGCAATCTTTAGATTCCTATTGTTCCTTCAGGGTTTCCAC 183705 ||||| || || || || || ||||| || ||||| | || ||| | || |||||||| Sbjct 17627 GCACCAAGCTTTGGTGTTGCTGCAATTTTCCGATTCATTTTATTCTTCCAAGGTTTCCAT 17568 Query 183706 AACTGGACGTTAAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTA 183765 |||||||| |||||||| |||||||||||||| || || ||| |||| |||| || ||| Sbjct 17567 AACTGGACTTTAAACCCTTTCCATATGATGGGTGTAGCGGGTGTACTTGGAGCTGCTCTA 17508 Query 183766 CTCAGTGCTATCCATGGTGTCACAGTAGAGAATACATTGTATGAAGATGGAGAACAAGCA 183825 || |||| || ||||| | || ||||| ||||| | | ||| ||||| || ||| Sbjct 17507 CTTTGTGCAATTCATGGCGCAACTGTAGAAAATACGCTTTTTGAGGATGGTGATGGTGCA 17448 Query 183826 AACACATTCAAGGCATTTGATTCCACTCAAGAAGAAGAGACGTATTCTATGGTTA 183880 ||||||||| || ||| | | ||||||| ||||| || || || ||||||| Sbjct 17447 AACACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACATACTCAATGGTTA 17393 Score = 416 bits (460), Expect = 3e-111 Identities = 525/715 (73%), Gaps = 6/715 (1%) Strand=Plus/Minus Query 183168 AACGAGGGGGTGGTTCGATGTCCTTGATGACTGGGTTAAACGCGATCGCTTTGTCTTTGT 183227 ||||||| ||||| ||||| | ||||||||| || || || || || |||||| | Sbjct 147548 AACGAGGT--TGGTTTGATGTAGTAGATGACTGGCTTCGTCGTGACCGTTTCGTCTTTCT 147491 Query 183228 GGGCTGGTCTGGACTCCTACTTCTTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTAC 183287 || ||||| || | || | | || || || || || || |||| |||||| |||| Sbjct 147490 AGGATGGTCAGGGTTATTATTATTGCCTACAGCATACCTGGCACTTGGTGGTTGGTTTAC 147431 Query 183288 TGGCACAGCTTTTGTTACGAGTTGGTATACCCATGGACTTGCTTCTTCCTATCTTGAAGG 183347 || || | ||||| ||| ||||||||| ||||| | || ||||| ||| | ||||| Sbjct 147430 AGGAACTACATTTGTAACGTCTTGGTATACTCATGGTTTAGCATCTTCATATTTAGAAGG 147371 Query 183348 TGCTAACTTTCTTA-CGGCAGCTGTCTCGACGCCTGCTGACGCTATGGGTCATTCTCTTC 183406 ||| ||||||| | |||||||| || || || || | ||||||||||||| | Sbjct 147370 ATGTAA-TTTCTTAACAGCAGCTGTTTCAACTCCAGCGAATAGTATGGGTCATTCTTTAT 147312 Query 183407 TGTTACTTTGGGGTCCTGAGTCTCAAGGGGACTTTCA-ACGCTGGTGCCAACTTGGGGGA 183465 | || |||||||| || || ||||||| || ||||| ||| ||||| |||||||| || Sbjct 147311 TATTCCTTTGGGGCCCAGAAGCTCAAGGCGA-TTTCACACGTTGGTGTCAACTTGGTGGT 147253 Query 183466 CTCTGGAATTTTGTGGCACTCCACGGTGCCTTTGCTCTCATTGGTTTCATGCTTCGACAG 183525 || |||| ||||| || || |||||||| |||||||| |||||||| |||||||| ||| Sbjct 147252 CTATGGACGTTTGTTGCTCTTCACGGTGCATTTGCTCTGATTGGTTTTATGCTTCGTCAG 147193 Query 183526 TTTGAACTTGCTCGCTTGATTGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCT 183585 |||||| |||| || | | || || |||||||| || ||||| || || | || Sbjct 147192 TTTGAAATTGCACGTTCAGTAAAGATTCGCCCTTACAACGCAATTGCATTTTCAGCACCA 147133 Query 183586 ATTGCTGTTTTTGTCAGTGTATTCCTTATCTATCCACTGGGTCAGTCTTCATGGTTCTTT 183645 ||| |||| || || ||||||| | || || || | || || ||| ||||||||| Sbjct 147132 ATTTCTGTATTCGTTTCTGTATTCTTAATTTACCCTTTAGGACAATCTGGTTGGTTCTTT 147073 Query 183646 GCACCTAGTTTCGGGGTAGCAGCAATCTTTAGATTCCTATTGTTCCTTCAGGGTTTCCAC 183705 ||||| || || || || || ||||| || ||||| | || ||| | || |||||||| Sbjct 147072 GCACCAAGCTTTGGTGTTGCTGCAATTTTCCGATTCATTTTATTCTTCCAAGGTTTCCAT 147013 Query 183706 AACTGGACGTTAAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTA 183765 |||||||| |||||||| |||||||||||||| || || ||| |||| |||| || ||| Sbjct 147012 AACTGGACTTTAAACCCTTTCCATATGATGGGTGTAGCGGGTGTACTTGGAGCTGCTCTA 146953 Query 183766 CTCAGTGCTATCCATGGTGTCACAGTAGAGAATACATTGTATGAAGATGGAGAACAAGCA 183825 || |||| || ||||| | || ||||| ||||| | | ||| ||||| || ||| Sbjct 146952 CTTTGTGCAATTCATGGCGCAACTGTAGAAAATACGCTTTTTGAGGATGGTGATGGTGCA 146893 Query 183826 AACACATTCAAGGCATTTGATTCCACTCAAGAAGAAGAGACGTATTCTATGGTTA 183880 ||||||||| || ||| | | ||||||| ||||| || || || ||||||| Sbjct 146892 AACACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACATACTCAATGGTTA 146838 Score = 203 bits (224), Expect = 4e-47 Identities = 239/321 (74%), Gaps = 2/321 (1%) Strand=Plus/Minus Query 183880 ACAGCGAATCGTTTCTGGTCACAAATCTTCGGGGTTGCGTTTAGCAATAAGCGTTGGTTG 183939 || || |||||||||||||||||||| || || || || ||| ||||| |||||||| Sbjct 16348 ACTGCAAATCGTTTCTGGTCACAAATTTTTGGTGTAGCTTTTTCAAATAAACGTTGGTTA 16289 Query 183940 CACTTCTTTATGTTGTTTGTTCCTGTCATGGGTCTTTGGGTCTCTTCTATTGGCATCATT 183999 |||||||||||||| |||||||| || | ||||||||| | | | ||||| | | Sbjct 16288 CACTTCTTTATGTTATTTGTTCCGGTAACTGGTCTTTGGATGAGTGCAATTGGTGTAGTA 16229 Query 184000 GGGCTTGCTCTTAATCTT-CGTGCTTATGATTTTGTAAGTCAAGAGATCAGAGCAGCAGA 184058 || | ||| |||| ||| ||||| |||||||| || ||||| || | || || || Sbjct 16228 GGTTTAGCT-TTAAACTTACGTGCGTATGATTTCGTTTCACAAGAAATTCGCGCTGCGGA 16170 Query 184059 AGATCCAGAATTTGAGACGTTCTACACAAAGAACATACTTCTTAATGAAGGACTACGTGC 184118 |||||| |||||||| || ||||| ||||| || || ||| | || ||||| | ||||| Sbjct 16169 AGATCCTGAATTTGAAACTTTCTATACAAAAAATATTCTTTTAAACGAAGGTATTCGTGC 16110 Query 184119 ATGGTTAGCACCTTCTGATCAACCACATGAGAATTTTATATTTCCAGAGGAGGTATTACC 184178 ||| | || || ||||| || ||||| || || |||| || |||||||| ||||| Sbjct 16109 TTGGATGGCTGCTCAAGATCAGCCTCATGAAAAACTTGTATTCCCTGAGGAGGTTTTACC 16050 Query 184179 TAGAGGCAATGCTCTTTGATG 184199 | || || ||||||| ||| Sbjct 16049 ACGTGGAAACGCTCTTTAATG 16029 Score = 203 bits (224), Expect = 4e-47 Identities = 239/321 (74%), Gaps = 2/321 (1%) Strand=Plus/Minus Query 183880 ACAGCGAATCGTTTCTGGTCACAAATCTTCGGGGTTGCGTTTAGCAATAAGCGTTGGTTG 183939 || || |||||||||||||||||||| || || || || ||| ||||| |||||||| Sbjct 145793 ACTGCAAATCGTTTCTGGTCACAAATTTTTGGTGTAGCTTTTTCAAATAAACGTTGGTTA 145734 Query 183940 CACTTCTTTATGTTGTTTGTTCCTGTCATGGGTCTTTGGGTCTCTTCTATTGGCATCATT 183999 |||||||||||||| |||||||| || | ||||||||| | | | ||||| | | Sbjct 145733 CACTTCTTTATGTTATTTGTTCCGGTAACTGGTCTTTGGATGAGTGCAATTGGTGTAGTA 145674 Query 184000 GGGCTTGCTCTTAATCTT-CGTGCTTATGATTTTGTAAGTCAAGAGATCAGAGCAGCAGA 184058 || | ||| |||| ||| ||||| |||||||| || ||||| || | || || || Sbjct 145673 GGTTTAGCT-TTAAACTTACGTGCGTATGATTTCGTTTCACAAGAAATTCGCGCTGCGGA 145615 Query 184059 AGATCCAGAATTTGAGACGTTCTACACAAAGAACATACTTCTTAATGAAGGACTACGTGC 184118 |||||| |||||||| || ||||| ||||| || || ||| | || ||||| | ||||| Sbjct 145614 AGATCCTGAATTTGAAACTTTCTATACAAAAAATATTCTTTTAAACGAAGGTATTCGTGC 145555 Query 184119 ATGGTTAGCACCTTCTGATCAACCACATGAGAATTTTATATTTCCAGAGGAGGTATTACC 184178 ||| | || || ||||| || ||||| || || |||| || |||||||| ||||| Sbjct 145554 TTGGATGGCTGCTCAAGATCAGCCTCATGAAAAACTTGTATTCCCTGAGGAGGTTTTACC 145495 Query 184179 TAGAGGCAATGCTCTTTGATG 184199 | || || ||||||| ||| Sbjct 145494 ACGTGGAAACGCTCTTTAATG 145474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611693698493800