Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_015289.1 Length=176184 Score E Sequences producing significant alignments: (Bits) Value seq52 700 0.0 >seq52 Length=149364 Score = 700 bits (776), Expect = 0.0 Identities = 747/980 (76%), Gaps = 16/980 (2%) Strand=Plus/Minus Query 164763 tttttGCGAGTGGGTGACTTCCACCAATAACCGTCTTTATGTCGGTTGGTTCGGTGTTCT 164822 |||||| |||||||| ||| ||| | |||||| | || |||||||||| ||||| | Sbjct 86190 TTTTTGTGAGTGGGTAACTAGCACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTGTT 86131 Query 164823 TATGATCCCCTGTTTGCTCGCCGCTACAATTTGT-TTTATTACTGCATTCATCGCTGCTC 164881 |||||||| ||| | | ||||| | || ||||| | ||||| ||||| |||| Sbjct 86130 AATGATCCCTACTTTATTAACAGCTACT-TCAGTATTTATCATCGCATTTATCGCAGCTC 86072 Query 164882 CCCCTGTGGACATTGATGGTATTCGTGAACCTGTCGCAGGTTCTCTAATGTACGGTAACA 164941 | ||||| || || |||||||| ||||| ||||| ||||||| || | || || |||| Sbjct 86071 CGCCTGTCGATATCGATGGTATCCGTGAGCCTGTTTCAGGTTCATTACTATATGGAAACA 86012 Query 164942 ACATCATCTCTGGTGCTGTCGTTCCGTCTTCTAACGCAATCGGACTTCACTTCTATCCTA 165001 | |||||| |||||||| | |||| |||||||||| ||||| | |||||||| || | Sbjct 86011 ATATCATCACTGGTGCTATTATTCCAACTTCTAACGCTATCGGTTTACACTTCTACCCAA 85952 Query 165002 TTTGGGAAGCTGCAACCATGGATGAATGGTTGTACAACGGTGGTCCTTACCAGTTGGTTG 165061 |||||||||| || | | ||||| ||||| ||||| |||||||||||||| | | | Sbjct 85951 TTTGGGAAGCAGCTTCTCTTGATGAGTGGTTATACAATGGTGGTCCTTACCAACTTATCG 85892 Query 165062 TCTTCCACTTCCTCATCGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTGTCTTACC 165121 | | ||| ||| || | || || || ||||||||||||||||||||| | |||| | Sbjct 85891 TTTGCCATTTCTTCTTAGGCGTTTGTTCATACATGGGTCGTGAGTGGGAATTATCTTTTC 85832 Query 165122 GCCTCGGTATGCGTCCTTGGATTTGCGTAGCATATAGCGCACCTGTCGCTGCTGCTGCCG 165181 | | ||||||||||||||||| || || || ||||| || ||||| ||| | | Sbjct 85831 GTTTAGGTATGCGTCCTTGGATCGCAGTTGCTTACTCAGCACCAGTTGCTGCAGCTACAG 85772 Query 165182 CAGTTTTCCTGGTCTATCCTTTCGGTCAAGGGAGTTTCTCTGATGGTATGCCTCTTGGTA 165241 | || ||| | | ||||| |||||||||| ||||||||||||||||||| | |||| Sbjct 85771 CTGTATTCATCATTTATCCAATCGGTCAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTA 85712 Query 165242 TCTCTGGTACTTTTAACTATATGTTCGTCTTCCAAGCAGAACATAACATTCTTATGCATC 165301 ||||||||||||| |||| ||| |||| |||||||| || || ||||| |||||||| | Sbjct 85711 TCTCTGGTACTTTCAACTTCATGATCGTATTCCAAGCTGAGCACAACATCCTTATGCACC 85652 Query 165302 CGTTCCACATGCTCGGCGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATG 165361 | ||||| ||||| || |||||||| ||||| ||||| || | |||||||||||||| | Sbjct 85651 CATTCCATATGCTTGGTGTTGCTGGTGTATTTGGTGGTTCATTATTCTCTGCTATGCACG 85592 Query 165362 GAAGTCTTGTTACTTCCTCACTCGTCCGCGAGACAACTGAAACAGAGAGTCAG--AACTA 165419 | ||||| ||||| || | | || || ||||||||| | || |||| ||| | Sbjct 85591 GTTCACTTGTAACTTCTTCTTTAATTCGTGAAACAACTGAA--AACGAATCAGCTAACGA 85534 Query 165420 CGGTTATAAGTTTGGACAAGAAGAAGAGACCTATAACATCGTCGCTGCCCACGGGTACTT 165479 ||||| || || || ||||||||||| || || |||||||| || || || || ||||| Sbjct 85533 AGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCATGGCTACTT 85474 Query 165480 CGGTCGTCTCATTTTCCAATACGCATCCTTCAACAATTCCCGTTCGCTGCACTTCTTCCT 165539 ||||||| | ||||||||||| || || |||||||| || ||||| | || |||||| | Sbjct 85473 CGGTCGTTTAATTTTCCAATATGCTTCTTTCAACAACTCTCGTTCATTACATTTCTTCTT 85414 Query 165540 CGCAGCATGGCCTGTAGTTGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATT 165599 || || ||||| || |||||||| |||||||||||| | ||| || || |||||||| Sbjct 85413 AGCTGCTTGGCCAGTTGTTGGTATTTGGTTCACTGCTTTAGGTATTTCAACTATGGCATT 85354 Query 165600 CAACCTGAACGGTTTCAACTTCAACCAGTCTATTGTTGATAGTCAGAACAAAATC----- 165654 |||| | || ||||||||||||||||| || |||| ||| || |||| || Sbjct 85353 CAACTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGAT--TC---ACAAGGTCGTGTA 85299 Query 165655 ATCCCTACTTGGGCTGACGTTCTGAACCGTGCTGGTCTGGGTATGGAAGTTATGCATGAG 165714 ||| |||||||| ||| || | |||||||| || ||||||||||| ||||||||| Sbjct 85298 ATCAACACTTGGGCAGACATTATCAACCGTGCCAACCTTGGTATGGAAGTAATGCATGAG 85239 Query 165715 CGTAACGCTCACAACTTCCC 165734 |||||||||||||||||||| Sbjct 85238 CGTAACGCTCACAACTTCCC 85219 Score = 419 bits (464), Expect = 3e-112 Identities = 522/709 (74%), Gaps = 6/709 (1%) Strand=Plus/Minus Query 166155 GGGTGGTTCGATGTCCTTGACGACTGGCTTAAACGAGATCGTTTCGTTTTTGTTGGTTGG 166214 || ||||| ||||| | || ||||||||| || || |||||||| ||| | || ||| Sbjct 18098 GGTTGGTTTGATGTAGTAGATGACTGGCTTCGTCGTGACCGTTTCGTCTTTCTAGGATGG 18039 Query 166215 TCTGGACTTCTTCTTCTTCCC-ACTGCTTATCTTGCTATTGGCGGTTGGCTCACTGGGAC 166273 || || || || || || || || || || || || |||| |||||| | || || || Sbjct 18038 TCAGGG-TTATTATTATTGCCTACAGCATACCTGGCACTTGGTGGTTGGTTTACAGGAAC 17980 Query 166274 TACTTTCGTCACGAGTTGGTATACTCATGGACTCGCAAGCAGTTATCTGGAGGG-TGCAA 166332 ||| || || ||| ||||||||||||||| | ||| ||| | || || || || Sbjct 17979 TACATTTGTAACGTCTTGGTATACTCATGGTTTAGCATCTTCATATTTAGAAGGATGTAA 17920 Query 166333 ACTTTCTTA-CTGCGGCAGTTTCTACTCCAGCAGATGCTATGGGTCATTCTCTACTTCTT 166391 ||||||| | || || ||||| |||||||| || ||||||||||||| || | | Sbjct 17919 --TTTCTTAACAGCAGCTGTTTCAACTCCAGCGAATAGTATGGGTCATTCTTTATTATTC 17862 Query 166392 CTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGGTGCCAACTTGGAGGGCTTTGG 166451 || ||||| || || |||||||| |||||| | ||||| |||||||| || || ||| Sbjct 17861 CTTTGGGGCCCAGAAGCTCAAGGCGATTTCACACGTTGGTGTCAACTTGGTGGTCTATGG 17802 Query 166452 GCCTTTGTTGCTCTCCACGGTGCTTTTGCCCTAATTGGTTTCATGCTTCGGCAGTTTGAA 166511 | ||||||||||| |||||||| ||||| || |||||||| |||||||| ||||||||| Sbjct 17801 ACGTTTGTTGCTCTTCACGGTGCATTTGCTCTGATTGGTTTTATGCTTCGTCAGTTTGAA 17742 Query 166512 ATCGCTCGTCTAGTAGGTATTCGTCCGTACAATGCAATCGCTTTTTCTGGTCCTATTGCT 166571 || || ||| |||| ||||| || ||||| ||||| || ||||| | || ||| || Sbjct 17741 ATTGCACGTTCAGTAAAGATTCGCCCTTACAACGCAATTGCATTTTCAGCACCAATTTCT 17682 Query 166572 GTCTTCGTTAGTGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCA 166631 || |||||| ||| || | || |||||| | || ||||| ||||||| || || ||| Sbjct 17681 GTATTCGTTTCTGTATTCTTAATTTACCCTTTAGGACAATCTGGTTGGTTCTTTGCACCA 17622 Query 166632 TCTTTCGGGGTCTCAGCAATCTTCCGATTCCTCCTTTTCCTTCAAGGATTCCACAACTGG 166691 || || || | ||||| ||||||||| | | ||| | ||||| ||||| |||||| Sbjct 17621 AGCTTTGGTGTTGCTGCAATTTTCCGATTCATTTTATTCTTCCAAGGTTTCCATAACTGG 17562 Query 166692 ACACTGAACCCATTTCATATGATGGGTGTAGCAGGTATTCTCGGTGGTGCATTGCTTTCT 166751 || | ||||| || ||||||||||||||||| ||| | || || | ||| | |||| | Sbjct 17561 ACTTTAAACCCTTTCCATATGATGGGTGTAGCGGGTGTACTTGGAGCTGCTCTACTTTGT 17502 Query 166752 GCCATCCATGGTGTTACAGTAGAGAACACTCTGTATCAAGATGGTGAACAGGCAAATACT 166811 || || ||||| | || ||||| || || || | | | |||||||| ||||| || Sbjct 17501 GCAATTCATGGCGCAACTGTAGAAAATACGCTTTTTGAGGATGGTGATGGTGCAAACACA 17442 Query 166812 TTCAAGGCATTCGACTCTACTCAAGAGGAAGAAACCTATTCAATGGTTA 166860 ||| || || || | ||||||| |||||||| || |||||||||| Sbjct 17441 TTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACATACTCAATGGTTA 17393 Score = 419 bits (464), Expect = 3e-112 Identities = 522/709 (74%), Gaps = 6/709 (1%) Strand=Plus/Minus Query 166155 GGGTGGTTCGATGTCCTTGACGACTGGCTTAAACGAGATCGTTTCGTTTTTGTTGGTTGG 166214 || ||||| ||||| | || ||||||||| || || |||||||| ||| | || ||| Sbjct 147543 GGTTGGTTTGATGTAGTAGATGACTGGCTTCGTCGTGACCGTTTCGTCTTTCTAGGATGG 147484 Query 166215 TCTGGACTTCTTCTTCTTCCC-ACTGCTTATCTTGCTATTGGCGGTTGGCTCACTGGGAC 166273 || || || || || || || || || || || || |||| |||||| | || || || Sbjct 147483 TCAGGG-TTATTATTATTGCCTACAGCATACCTGGCACTTGGTGGTTGGTTTACAGGAAC 147425 Query 166274 TACTTTCGTCACGAGTTGGTATACTCATGGACTCGCAAGCAGTTATCTGGAGGG-TGCAA 166332 ||| || || ||| ||||||||||||||| | ||| ||| | || || || || Sbjct 147424 TACATTTGTAACGTCTTGGTATACTCATGGTTTAGCATCTTCATATTTAGAAGGATGTAA 147365 Query 166333 ACTTTCTTA-CTGCGGCAGTTTCTACTCCAGCAGATGCTATGGGTCATTCTCTACTTCTT 166391 ||||||| | || || ||||| |||||||| || ||||||||||||| || | | Sbjct 147364 --TTTCTTAACAGCAGCTGTTTCAACTCCAGCGAATAGTATGGGTCATTCTTTATTATTC 147307 Query 166392 CTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGGTGCCAACTTGGAGGGCTTTGG 166451 || ||||| || || |||||||| |||||| | ||||| |||||||| || || ||| Sbjct 147306 CTTTGGGGCCCAGAAGCTCAAGGCGATTTCACACGTTGGTGTCAACTTGGTGGTCTATGG 147247 Query 166452 GCCTTTGTTGCTCTCCACGGTGCTTTTGCCCTAATTGGTTTCATGCTTCGGCAGTTTGAA 166511 | ||||||||||| |||||||| ||||| || |||||||| |||||||| ||||||||| Sbjct 147246 ACGTTTGTTGCTCTTCACGGTGCATTTGCTCTGATTGGTTTTATGCTTCGTCAGTTTGAA 147187 Query 166512 ATCGCTCGTCTAGTAGGTATTCGTCCGTACAATGCAATCGCTTTTTCTGGTCCTATTGCT 166571 || || ||| |||| ||||| || ||||| ||||| || ||||| | || ||| || Sbjct 147186 ATTGCACGTTCAGTAAAGATTCGCCCTTACAACGCAATTGCATTTTCAGCACCAATTTCT 147127 Query 166572 GTCTTCGTTAGTGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCA 166631 || |||||| ||| || | || |||||| | || ||||| ||||||| || || ||| Sbjct 147126 GTATTCGTTTCTGTATTCTTAATTTACCCTTTAGGACAATCTGGTTGGTTCTTTGCACCA 147067 Query 166632 TCTTTCGGGGTCTCAGCAATCTTCCGATTCCTCCTTTTCCTTCAAGGATTCCACAACTGG 166691 || || || | ||||| ||||||||| | | ||| | ||||| ||||| |||||| Sbjct 147066 AGCTTTGGTGTTGCTGCAATTTTCCGATTCATTTTATTCTTCCAAGGTTTCCATAACTGG 147007 Query 166692 ACACTGAACCCATTTCATATGATGGGTGTAGCAGGTATTCTCGGTGGTGCATTGCTTTCT 166751 || | ||||| || ||||||||||||||||| ||| | || || | ||| | |||| | Sbjct 147006 ACTTTAAACCCTTTCCATATGATGGGTGTAGCGGGTGTACTTGGAGCTGCTCTACTTTGT 146947 Query 166752 GCCATCCATGGTGTTACAGTAGAGAACACTCTGTATCAAGATGGTGAACAGGCAAATACT 166811 || || ||||| | || ||||| || || || | | | |||||||| ||||| || Sbjct 146946 GCAATTCATGGCGCAACTGTAGAAAATACGCTTTTTGAGGATGGTGATGGTGCAAACACA 146887 Query 166812 TTCAAGGCATTCGACTCTACTCAAGAGGAAGAAACCTATTCAATGGTTA 166860 ||| || || || | ||||||| |||||||| || |||||||||| Sbjct 146886 TTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACATACTCAATGGTTA 146838 Score = 199 bits (220), Expect = 4e-46 Identities = 235/318 (74%), Gaps = 0/318 (0%) Strand=Plus/Minus Query 166860 ACAGCAAACCGCTATTGGTCTCAGATCTTCGGTATTGCGTTTAGTAATAAGAGGTGGTTG 166919 || ||||| || | ||||| || || || ||| | || ||| ||||| | ||||| Sbjct 16348 ACTGCAAATCGTTTCTGGTCACAAATTTTTGGTGTAGCTTTTTCAAATAAACGTTGGTTA 16289 Query 166920 CATTTCTTTATGCTGTTTGTTCCTGTTATGGGTCTGTGGACAAGTTCCATCGGTATTATT 166979 || ||||||||| | |||||||| || | ||||| |||| ||| | || ||| | | Sbjct 16288 CACTTCTTTATGTTATTTGTTCCGGTAACTGGTCTTTGGATGAGTGCAATTGGTGTAGTA 16229 Query 166980 GGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAACTAAGGGCAGCAGAG 167039 ||| | ||| | ||| | ||||| ||||| || ||||| |||||| | | || || || Sbjct 16228 GGTTTAGCTTTAAACTTACGTGCGTATGATTTCGTTTCACAAGAAATTCGCGCTGCGGAA 16169 Query 167040 GATCCTGAGTTTGAAACCTTCTATACCAAGAACATTCTCTTGAATGAGGGTATGCGTTCT 167099 |||||||| |||||||| |||||||| || || ||||| || || || ||||| ||| || Sbjct 16168 GATCCTGAATTTGAAACTTTCTATACAAAAAATATTCTTTTAAACGAAGGTATTCGTGCT 16109 Query 167100 TGGATGGCAACTATCGATCAACCTCATGAGAGTTTCGTATTCCCTGAAGAGGTTCTTCCT 167159 |||||||| || ||||| |||||||| | | ||||||||||| |||||| | || Sbjct 16108 TGGATGGCTGCTCAAGATCAGCCTCATGAAAAACTTGTATTCCCTGAGGAGGTTTTACCA 16049 Query 167160 AGAGGTAACGCTCTCTAA 167177 | || |||||||| ||| Sbjct 16048 CGTGGAAACGCTCTTTAA 16031 Score = 199 bits (220), Expect = 4e-46 Identities = 235/318 (74%), Gaps = 0/318 (0%) Strand=Plus/Minus Query 166860 ACAGCAAACCGCTATTGGTCTCAGATCTTCGGTATTGCGTTTAGTAATAAGAGGTGGTTG 166919 || ||||| || | ||||| || || || ||| | || ||| ||||| | ||||| Sbjct 145793 ACTGCAAATCGTTTCTGGTCACAAATTTTTGGTGTAGCTTTTTCAAATAAACGTTGGTTA 145734 Query 166920 CATTTCTTTATGCTGTTTGTTCCTGTTATGGGTCTGTGGACAAGTTCCATCGGTATTATT 166979 || ||||||||| | |||||||| || | ||||| |||| ||| | || ||| | | Sbjct 145733 CACTTCTTTATGTTATTTGTTCCGGTAACTGGTCTTTGGATGAGTGCAATTGGTGTAGTA 145674 Query 166980 GGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAACTAAGGGCAGCAGAG 167039 ||| | ||| | ||| | ||||| ||||| || ||||| |||||| | | || || || Sbjct 145673 GGTTTAGCTTTAAACTTACGTGCGTATGATTTCGTTTCACAAGAAATTCGCGCTGCGGAA 145614 Query 167040 GATCCTGAGTTTGAAACCTTCTATACCAAGAACATTCTCTTGAATGAGGGTATGCGTTCT 167099 |||||||| |||||||| |||||||| || || ||||| || || || ||||| ||| || Sbjct 145613 GATCCTGAATTTGAAACTTTCTATACAAAAAATATTCTTTTAAACGAAGGTATTCGTGCT 145554 Query 167100 TGGATGGCAACTATCGATCAACCTCATGAGAGTTTCGTATTCCCTGAAGAGGTTCTTCCT 167159 |||||||| || ||||| |||||||| | | ||||||||||| |||||| | || Sbjct 145553 TGGATGGCTGCTCAAGATCAGCCTCATGAAAAACTTGTATTCCCTGAGGAGGTTTTACCA 145494 Query 167160 AGAGGTAACGCTCTCTAA 167177 | || |||||||| ||| Sbjct 145493 CGTGGAAACGCTCTTTAA 145476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563658679226240