Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq52 735 0.0 >seq52 Length=149364 Score = 735 bits (814), Expect = 0.0 Identities = 758/992 (76%), Gaps = 0/992 (0%) Strand=Plus/Minus Query 169681 TGGCCTCAGTTTACTGATTGGGTAACAAGCACAAACAACCGCATCTATGTTGGTTGGTTC 169740 ||| ||| ||| ||| |||||||| ||||| | ||||| | || | |||||||| Sbjct 86198 TGGGCTCGTTTTTGTGAGTGGGTAACTAGCACTGAAAACCGTTTATACATCGGTTGGTTT 86139 Query 169741 GGTGTCTTGATGATCCCATGTCTATTAGCAGCAGCAACCTGCTTTATCGTTGCTTTCATC 169800 ||||| || |||||||| | ||||| |||| | | |||||| | || || ||| Sbjct 86138 GGTGTGTTAATGATCCCTACTTTATTAACAGCTACTTCAGTATTTATCATCGCATTTATC 86079 Query 169801 GCAGCTCCACCTGTGGACATCGATGGAATCAGAGAACCTGTAGCAGGTTCATTCATGTAT 169860 |||||||| ||||| || |||||||| ||| | || ||||| |||||||||| | ||| Sbjct 86078 GCAGCTCCGCCTGTCGATATCGATGGTATCCGTGAGCCTGTTTCAGGTTCATTACTATAT 86019 Query 169861 GGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTCCACTTC 169920 || ||||| |||||| ||||||| || ||||| |||| ||||| |||||| | |||||| Sbjct 86018 GGAAACAATATCATCACTGGTGCTATTATTCCAACTTCTAACGCTATCGGTTTACACTTC 85959 Query 169921 TATCCTATTTGGGAAGCAGCAACTCTAGATGAGTGGTTGTATAACGGTGGTCCTTATCAA 169980 || || |||||||||||||| |||| ||||||||||| || || ||||||||||| ||| Sbjct 85958 TACCCAATTTGGGAAGCAGCTTCTCTTGATGAGTGGTTATACAATGGTGGTCCTTACCAA 85899 Query 169981 TTAGTTATCTTCCACTTCCTTATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTA 170040 | | | | ||| ||| | | || | | | | ||||||||| | |||||||| || Sbjct 85898 CTTATCGTTTGCCATTTCTTCTTAGGCGTTTGTTCATACATGGGTCGTGAGTGGGAATTA 85839 Query 170041 TCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTAGCATATTCTGCTCCAGTGTCAGCA 170100 || | |||||||||||||||||||||||| || || || || || ||||| | ||| Sbjct 85838 TCTTTTCGTTTAGGTATGCGTCCTTGGATCGCAGTTGCTTACTCAGCACCAGTTGCTGCA 85779 Query 170101 GCATTCGCTGTATTCTTAGTGTATCCTTTCGGTCAGGGATCTTTCTCAGACGGAATGCCT 170160 || ||||||||| | | ||||| ||||||| || |||||||| || || |||||| Sbjct 85778 GCTACAGCTGTATTCATCATTTATCCAATCGGTCAAGGTTCTTTCTCTGATGGTATGCCT 85719 Query 170161 CTAGGTATCTCAGGTACATTTAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTT 170220 |||||||||| ||||| || ||||||||| ||||||||||||| ||||||||||| ||| Sbjct 85718 TTAGGTATCTCTGGTACTTTCAACTTCATGATCGTATTCCAAGCTGAGCACAACATCCTT 85659 Query 170221 ATGCACCCATTCCATATGGCAGGGGTTGCTGGTATGTTCGGAGGAGCACTCTTCTCAGCA 170280 |||||||||||||||||| || ||||||||| | || || || || | ||||| || Sbjct 85658 ATGCACCCATTCCATATGCTTGGTGTTGCTGGTGTATTTGGTGGTTCATTATTCTCTGCT 85599 Query 170281 ATGCACGGTTCACTTGTAACATCTTCTCTAATCAGAGAGACAACAGATAACGAGTCACAG 170340 |||||||||||||||||||| |||||| |||| | || ||||| || ||||| ||| Sbjct 85598 ATGCACGGTTCACTTGTAACTTCTTCTTTAATTCGTGAAACAACTGAAAACGAATCAGCT 85539 Query 170341 AACTATGGATACAAATTCGGACAAGAAGAAGAAACATACAACATTGTTGCAGCACATGGA 170400 ||| | || ||||||||||| |||||||||||||| |||||||| |||||||| ||||| Sbjct 85538 AACGAAGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCATGGC 85479 Query 170401 TACTTTGGTAGACTTATCTTCCAATATGCTAGCTTTAACAATAGTCGTAGTCTTCACTTC 170460 ||||| ||| | | || |||||||||||| || ||||| |||| | || ||| Sbjct 85478 TACTTCGGTCGTTTAATTTTCCAATATGCTTCTTTCAACAACTCTCGTTCATTACATTTC 85419 Query 170461 TTCCTTGCTACATTCCCTGTAGTATGCATCTGGTTAACTTCAATGGGTATTTGCACAATG 170520 ||| | ||| | | || || || | || ||||| ||| | | ||||||| || ||| Sbjct 85418 TTCTTAGCTGCTTGGCCAGTTGTTGGTATTTGGTTCACTGCTTTAGGTATTTCAACTATG 85359 Query 170521 GCATTTAACCTTAATGGATTTAACTTCAACCAGTCAATCGTAGATGGATCTGGTAAAGTA 170580 ||||| ||| | ||||| || ||||||||||| ||| | |||||| | ||| ||| Sbjct 85358 GCATTCAACTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAAGGTCGTGTA 85299 Query 170581 GTTCCTACATGGGCAGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTAATGCATGAG 170640 | || ||||||||| || | ||| | || ||||| ||||||||||||||||||||| Sbjct 85298 ATCAACACTTGGGCAGACATTATCAACCGTGCCAACCTTGGTATGGAAGTAATGCATGAG 85239 Query 170641 CGTAATGCACACAACTTCCCACTTGACTTGGC 170672 ||||| || |||||||||||| | || || || Sbjct 85238 CGTAACGCTCACAACTTCCCATTAGATTTAGC 85207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582845807034400