Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_015569.1 Length=178563 Score E Sequences producing significant alignments: (Bits) Value seq52 699 0.0 >seq52 Length=149364 Score = 699 bits (774), Expect = 0.0 Identities = 744/979 (76%), Gaps = 2/979 (0%) Strand=Plus/Plus Query 83978 ATCCAACGGGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCAAGCCCGGCACG 84037 ||| || |||||||| || |||||||| || ||||| |||||||||||||| |||||| Sbjct 85212 ATCTAATGGGAAGTTGTGAGCGTTACGCTCATGCATTACTTCCATACCAAGGTTGGCACG 85271 Query 84038 ATTAAGTACATCGGCCCAGGTATTGACAACACGGTTTTGGCTATCGACAAGACTCTGATT 84097 || | | || ||||| || |||| ||||| ||| ||| |||| || || Sbjct 85272 GTTGATAATGTCTGCCCAAGTGTTGATTACACGACCTTGTGAATCTACAACTGATTGGTT 85331 Query 84098 GAAGTTAAATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAGCAGCAAACCAAAT 84157 |||||| || ||||| | || |||||||| || || ||| | ||||| |||||||| Sbjct 85332 GAAGTTGAAACCATTTAAGTTGAATGCCATAGTTGAAATACCTAAAGCAGTGAACCAAAT 85391 Query 84158 GCCAACCACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTATTGTTGAAGGAAGC 84217 ||||| |||||||||||||| ||||| || || | |||||| |||||||| ||||| Sbjct 85392 ACCAACAACTGGCCAAGCAGCTAAGAAGAAATGTAATGAACGAGAGTTGTTGAAAGAAGC 85451 Query 84218 ATACTGGAAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGTTTCCTC 84277 ||| ||||| || | ||||||||||||||| ||||| ||||| || || |||||||| || Sbjct 85452 ATATTGGAAAATTAAACGACCGAAGTAGCCATGAGCTGCAACGATGTTGTAAGTTTCTTC 85511 Query 84278 TTCTTGACCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCGGATTAG 84337 |||||||||||| |||||||| | ||| ||| | ||||| || ||||| || |||| Sbjct 85512 TTCTTGACCGAATTTGTAACCTTCGTTAGCTGATTCGTTTTCAGTTGTTTCACGAATTAA 85571 Query 84338 AGAAGAAGTGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCACCGAATACACCAGC 84397 ||||||||| ||||||||||| ||||| |||||||||| | ||||| ||||||||||| Sbjct 85572 AGAAGAAGTTACAAGTGAACCGTGCATAGCAGAGAATAATGAACCACCAAATACACCAGC 85631 Query 84398 AACTCCCAACATGTGAAAGGGATGCATAAGGATGTTATGTTCCGCCTGGAAGACAAGCAT 84457 ||| || | ||| || || || |||||||||||||| || || || ||||| || | ||| Sbjct 85632 AACACCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCAGCTTGGAATACGATCAT 85691 Query 84458 GTAGTTGAACGTTCCTGAGATACCAAGTGGCATGCCATCAGAGAAAGAACCTTGCCCGAA 84517 | ||||||| || || |||||||| | ||||| |||||||||||||||||||| |||| Sbjct 85692 GAAGTTGAAAGTACCAGAGATACCTAAAGGCATACCATCAGAGAAAGAACCTTGACCGAT 85751 Query 84518 AGGATACACAAGGAATACAGCAGATGCCGCTGCAACTGGAGCAGAGTAAGCAACACAGAT 84577 ||||| | | ||||||||| | || || |||||||| || ||||||||||| ||| Sbjct 85752 TGGATAAATGATGAATACAGCTGTAGCTGCAGCAACTGGTGCTGAGTAAGCAACTGCGAT 85811 Query 84578 CCATGGACGCATACCGAGACGATATGAAAGTTCCCATTCACGACCCATGTAAGCAAATGC 84637 ||| ||||||||||| | |||| | || | |||||| |||||||||||||| | | | | Sbjct 85812 CCAAGGACGCATACCTAAACGAAAAGATAATTCCCACTCACGACCCATGTATGAACAAAC 85871 Query 84638 ACCAATCAGGAAGTGAAAGACAACAAGTTGATAAGGTCCACCATTATATAGCCATTCGTC 84697 || | | ||| || | || | |||||| ||||| |||||||| |||| ||| || || Sbjct 85872 GCCTAAGAAGAAATGGCAAACGATAAGTTGGTAAGGACCACCATTGTATAACCACTCATC 85931 Query 84698 CATACTTGCTGCTTCCCAAATAGGATAGAAATGTAGACCAATAGCATTAGAGGATGGAAC 84757 | | |||||||||||||| || ||||| |||| ||| ||||| ||||| | ||||| Sbjct 85932 AAGAGAAGCTGCTTCCCAAATTGGGTAGAAGTGTAAACCGATAGCGTTAGAAGTTGGAAT 85991 Query 84758 TACGGCACCAGAAATGATGTTGTTTCCGTACATGAGAGAACCAGCGACTGGCTCACGGAT 84817 | ||||||| ||||| |||||||| || | | ||||| | || ||||||||||| Sbjct 85992 AATAGCACCAGTGATGATATTGTTTCCATATAGTAATGAACCTGAAACAGGCTCACGGAT 86051 Query 84818 ACCGTCAATATCAACTGGGGGTGCACCAACGAATGCAATGATGAA-ACAGACAGTGGCAG 84876 ||| || ||||| || || || || | | ||||| ||||| || || || ||| || | Sbjct 86052 ACCATCGATATCGACAGGCGGAGCTGCGATAAATGCGATGATAAATACTGA-AGTAGCTG 86110 Query 84877 CAAGTAGAGTTGGAATCATAAGAGTTCCAAACCAACCAACATAGATACGGTTGTTAGTGG 84936 | || ||| || ||||| | ||||||||||| | || | |||||| | |||| Sbjct 86111 TTAATAAAGTAGGGATCATTAACACACCAAACCAACCGATGTATAAACGGTTTTCAGTGC 86170 Query 84937 AGGTGACCCAATCACAGAA 84955 || ||||| ||||| || Sbjct 86171 TAGTTACCCACTCACAAAA 86189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571271450583080