Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_016657.1 Length=47055 Score E Sequences producing significant alignments: (Bits) Value seq52 630 2e-176 >seq52 Length=149364 Score = 630 bits (698), Expect = 2e-176 Identities = 736/994 (74%), Gaps = 0/994 (0%) Strand=Plus/Plus Query 35964 TCAGCAGCTGCTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATG 36023 ||| || | |||| || | |||||||||||| ||||||||||||||||| |||||||| Sbjct 85198 TCAACAACAGCTAAATCTAATGGGAAGTTGTGAGCGTTACGCTCATGCATTACTTCCATA 85257 Query 36024 CCTAAGTCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCA 36083 || | || ||||||||| | |||||| |||||||| || || | || | ||||| Sbjct 85258 CCAAGGTTGGCACGGTTGATAATGTCTGCCCAAGTGTTGATTACACGACCTTGTGAATCT 85317 Query 36084 ACGACTGACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATA 36143 || ||||| || |||||||| || || || | || || |||||||| || | || | | Sbjct 85318 ACAACTGATTGGTTGAAGTTGAAACCATTTAAGTTGAATGCCATAGTTGAAATACCTAAA 85377 Query 36144 GCGGTAAGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTA 36203 || || | ||| || | | || ||||||||||| | |||||||||||| || Sbjct 85378 GCAGTGAACCAAATACCAACAACTGGCCAAGCAGCTAAGAAGAAATGTAATGAACGAGAG 85437 Query 36204 TTATTAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATG 36263 || || || |||||| ||||| || | | || |||||||||||||| ||||| ||| Sbjct 85438 TTGTTGAAAGAAGCATATTGGAAAATTAAACGACCGAAGTAGCCATGAGCTGCAACGATG 85497 Query 36264 TTATACGTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTT 36323 || || || ||||||||||| |||||||| || || | ||| ||||| ||||| Sbjct 85498 TTGTAAGTTTCTTCTTCTTGACCGAATTTGTAACCTTCGTTAGCTGATTCGTTTTCAGTT 85557 Query 36324 GTTTCACGAATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCA 36383 ||||||||||| | || ||||| ||||| ||||||||||||| |||||| | ||| Sbjct 85558 GTTTCACGAATTAAAGAAGAAGTTACAAGTGAACCGTGCATAGCAGAGAATAATGAACCA 85617 Query 36384 CCGAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCC 36443 || ||||| || |||||||| ||||||||||| || ||||||||||| ||||| || || Sbjct 85618 CCAAATACACCAGCAACACCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCAGCT 85677 Query 36444 TGAAAGACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAA 36503 || || || | ||| || |||||||| || || ||||| | ||||||||||||||||||| Sbjct 85678 TGGAATACGATCATGAAGTTGAAAGTACCAGAGATACCTAAAGGCATACCATCAGAGAAA 85737 Query 36504 CTCCCTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAA 36563 ||||| || | || || | | ||||||||| ||||| ||||| || ||||| Sbjct 85738 GAACCTTGACCGATTGGATAAATGATGAATACAGCTGTAGCTGCAGCAACTGGTGCTGAG 85797 Query 36564 TAAGCTACACATATCCACGGCCTCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCC 36623 ||||| || ||||| || | |||||||| | | || | |||||| | || ||| Sbjct 85798 TAAGCAACTGCGATCCAAGGACGCATACCTAAACGAAAAGATAATTCCCACTCACGACCC 85857 Query 36624 AAGTAAGCTGAGATACCAATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTA 36683 | ||| | | | || | || || ||| | || || ||||| || || || || || Sbjct 85858 ATGTATGAACAAACGCCTAAGAAGAAATGGCAAACGATAAGTTGGTAAGGACCACCATTG 85917 Query 36684 TATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCG 36743 ||||||||||| || || | || |||||||| |||||||||||||| | |||||| ||| Sbjct 85918 TATAACCACTCATCAAGAGAAGCTGCTTCCCAAATTGGGTAGAAGTGTAAACCGATAGCG 85977 Query 36744 TTCGATGATGGGACGATTGCCCCAGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAG 36803 || || | ||| | || || |||| |||||| ||||||||||| ||||||| ||||| Sbjct 85978 TTAGAAGTTGGAATAATAGCACCAGTGATGATATTGTTTCCATATAGTAATGAACCTGAA 86037 Query 36804 ACAGGCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAAT 36863 ||||||||||| |||||||| ||||| || || || || || | |||||| || | |||| Sbjct 86038 ACAGGCTCACGGATACCATCGATATCGACAGGCGGAGCTGCGATAAATGCGATGATAAAT 86097 Query 36864 GCTGTCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGG 36923 ||| |||||||| | | ||||||||||| || |||||||| || | || | Sbjct 86098 ACTGAAGTAGCTGTTAATAAAGTAGGGATCATTAACACACCAAACCAACCGATGTATAAA 86157 Query 36924 CGGTTGTTTGTACTTGTAACCCAGTCACATAAAC 36957 ||||| | || || || ||||| ||||| |||| Sbjct 86158 CGGTTTTCAGTGCTAGTTACCCACTCACAAAAAC 86191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150453862219554