Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq186 86.0 5e-12 >seq186 Length=265621 Score = 86.0 bits (94), Expect = 5e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 29878 ACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGC 29937 || || |||| |||| ||||||| || |||||| ||||||||| ||||| || || ||| Sbjct 12502 ACCTGCGCCAGCATGCACGTGAGCAGCGAGTAGGAGGCGATGTTGAAGGGCACGCCCAGC 12561 Query 29938 CCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAAC 29997 || | ||| | ||||| ||| || | ||| || ||||| ||||| ||||||||| Sbjct 12562 CCAAGGTCGCACGACCGCTGATACATCTGGCAGCTCAGCTCGCCGTCTGCGACGTAAAAC 12621 Query 29998 TG 29999 || Sbjct 12622 TG 12623 Score = 84.2 bits (92), Expect = 2e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 30114 CAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAA 30173 || ||| ||||||||| |||||||||||||| |||||| ||||| | || || || Sbjct 13284 CACCTGGTCCACCCCCTGGCCCGAGTAGTCTGCGTGCATGTCGGTGTAGGCGGCGCCAAA 13343 Query 30174 ATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTG 30222 || | ||||||||| ||||| || || |||||||| ||| |||||| Sbjct 13344 GTGGCGCCACTGGAAGCCGTAGACAGGGCCCAGGTCCATCTCCTCCCTG 13392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408616101011873