Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_019443.1 Length=172879 Score E Sequences producing significant alignments: (Bits) Value seq52 773 0.0 >seq52 Length=149364 Score = 773 bits (856), Expect = 0.0 Identities = 745/955 (78%), Gaps = 6/955 (1%) Strand=Plus/Minus Query 162539 TCGGTTGGTTCGGTGTCTTGATGATCCCTTGCTTGCTCGCAGCAGCAACTTGC---TTCA 162595 |||||||||| ||||| || ||||||||| || | | |||| |||| || | Sbjct 86149 TCGGTTGGTTTGGTGTGTTAATGATCCCTACTTTATT---AACAGCTACTTCAGTATTTA 86093 Query 162596 TCATTGCATTCATTGCAGCACCTCCAGTTGATATCGATGGTATCAGAGAACCTGTTGCAG 162655 |||| ||||| || ||||| || || || ||||||||||||||| | || |||||| ||| Sbjct 86092 TCATCGCATTTATCGCAGCTCCGCCTGTCGATATCGATGGTATCCGTGAGCCTGTTTCAG 86033 Query 162656 GTTCACTTCTCTATGGTAACAACATCATCTCTGGTGCTGTCGTTCCTAGTTCAAATGCTA 162715 ||||| | || ||||| ||||| |||||| |||||||| | |||| | ||| || |||| Sbjct 86032 GTTCATTACTATATGGAAACAATATCATCACTGGTGCTATTATTCCAACTTCTAACGCTA 85973 Query 162716 TTGGTCTTCACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGTTGTATAATG 162775 | ||| | |||||||| || || ||||||||||| |||||||||||||||| || |||| Sbjct 85972 TCGGTTTACACTTCTACCCAATTTGGGAAGCAGCTTCTCTTGATGAGTGGTTATACAATG 85913 Query 162776 GTGGACCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACAGCATACTGTGGTC 162835 |||| |||| ||||||| | || | ||| ||| | | || | ||||| |||| Sbjct 85912 GTGGTCCTTACCAACTTATCGTTTGCCATTTCTTCTTAGGCGTTTGTTCATACATGGGTC 85853 Query 162836 GTCAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCTTGGATCTGTGTTGCATACTCTG 162895 || |||||||| | |||| || ||||||||||||||||||||| ||||| ||||| | Sbjct 85852 GTGAGTGGGAATTATCTTTTCGTTTAGGTATGCGTCCTTGGATCGCAGTTGCTTACTCAG 85793 Query 162896 CACCAGTATCTGCAGCATTCGCTGTGTTCTTGGTCTATCCTTTCGGTCAAGGTTCTTTCT 162955 ||||||| ||||||| ||||| ||| | | ||||| |||||||||||||||||| Sbjct 85792 CACCAGTTGCTGCAGCTACAGCTGTATTCATCATTTATCCAATCGGTCAAGGTTCTTTCT 85733 Query 162956 CTGACGCAATGCCTCTTGGTATTTCTGGTACTTTTAACTACATGTTCGTGTTCCAAGCAG 163015 |||| | |||||| | ||||| ||||||||||| |||| |||| |||| |||||||| | Sbjct 85732 CTGATGGTATGCCTTTAGGTATCTCTGGTACTTTCAACTTCATGATCGTATTCCAAGCTG 85673 Query 163016 AGCACAACATCCTAATGCACCCCTTCCATATGATTGGAGTCGCAGGTGTATTCGGTGGTT 163075 ||||||||||||| |||||||| ||||||||| |||| || || |||||||| ||||||| Sbjct 85672 AGCACAACATCCTTATGCACCCATTCCATATGCTTGGTGTTGCTGGTGTATTTGGTGGTT 85613 Query 163076 CACTCTTTAGTGCTATGCACGGTTCTCTTGTTACTTCTTCTCTTATCAGAGAAACTACTG 163135 || | || ||||||||||||||| ||||| ||||||||| | || | ||||| |||| Sbjct 85612 CATTATTCTCTGCTATGCACGGTTCACTTGTAACTTCTTCTTTAATTCGTGAAACAACTG 85553 Query 163136 AGCAAGAGTCACAGAACTACGGTTATAAGTTCGGACAAGAAGAAGAGACTTACAACATTG 163195 | | || ||| ||| | ||||| || ||||| ||||||||||| ||||||||||| | Sbjct 85552 AAAACGAATCAGCTAACGAAGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCG 85493 Query 163196 TTGCTGCTCATGGATACTTTGGTCGCTTGATCTTCCAGTATGCATCTTTCAACAACTCAC 163255 |||| |||||||| ||||| ||||| || || ||||| ||||| |||||||||||||| | Sbjct 85492 TTGCAGCTCATGGCTACTTCGGTCGTTTAATTTTCCAATATGCTTCTTTCAACAACTCTC 85433 Query 163256 GTTCACTTCACTTCTTCCTTGCTGCATTCCCTGTGGTCTGCATCTGGTTCACTGCAATGG 163315 ||||| | || |||||| | ||||| | || || || | || ||||||||||| | | Sbjct 85432 GTTCATTACATTTCTTCTTAGCTGCTTGGCCAGTTGTTGGTATTTGGTTCACTGCTTTAG 85373 Query 163316 GTGTGTCAACTATGGCATTCAACCTTAACGGTTTCAACTTCAACCAATCCGTCGTTGACG 163375 || | |||||||||||||||||| | || |||||||||||||||||||| || || || Sbjct 85372 GTATTTCAACTATGGCATTCAACTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATT 85313 Query 163376 CAGGTGGTAAAGTGATTCCTACTTGGGCAGATATCCTTAACAGAGCAGGACTTGGTATGG 163435 || ||| || || ||||||||||| || | ||| | || |||||||||| Sbjct 85312 CACAAGGTCGTGTAATCAACACTTGGGCAGACATTATCAACCGTGCCAACCTTGGTATGG 85253 Query 163436 AAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCTGCTGCTGA 163490 |||| ||||| |||||||| ||||||||||||||| | || | |||| || ||| Sbjct 85252 AAGTAATGCATGAGCGTAACGCTCACAACTTCCCATTAGATTTAGCTGTTGTTGA 85198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553082719018440