Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_020835.1 Length=47325 Score E Sequences producing significant alignments: (Bits) Value seq52 607 2e-169 >seq52 Length=149364 Score = 607 bits (672), Expect = 2e-169 Identities = 726/986 (74%), Gaps = 0/986 (0%) Strand=Plus/Plus Query 17834 AGCTAAATCTAGCGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCAAGGTT 17893 ||||||||||| |||||||| ||||| |||||||| ||||| ||||| | |||||||| Sbjct 85206 AGCTAAATCTAATGGGAAGTTGTGAGCGTTACGCTCATGCATTACTTCCATACCAAGGTT 85265 Query 17894 AGCTCTGTTGAGTACGTCAGCCCATGTAGGTACGACTTGTCCTCCAGCTGCTACAATGGA 17953 || | ||||| | ||| ||||| || | || | ||| | |||||| || Sbjct 85266 GGCACGGTTGATAATGTCTGCCCAAGTGTTGATTACACGACCTTGTGAATCTACAACTGA 85325 Query 17954 TTGGTTGAAGTTGAATCCATTGAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTAAG 18013 ||||||||||||||| ||||| | || || |||||||| || || || | || || | Sbjct 85326 TTGGTTGAAGTTGAAACCATTTAAGTTGAATGCCATAGTTGAAATACCTAAAGCAGTGAA 85385 Query 18014 CCATATGCAAGTGACGGGCCAAGCAGCCAAGAAGAAATGTAGACTCCTGCTATTGTTAAA 18073 ||| || | | || ||||||||||| ||||||||||||| | ||||| || Sbjct 85386 CCAAATACCAACAACTGGCCAAGCAGCTAAGAAGAAATGTAATGAACGAGAGTTGTTGAA 85445 Query 18074 GCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATATTATACGT 18133 |||||| ||||| || | | || |||||||||||||| ||||| || || || || Sbjct 85446 AGAAGCATATTGGAAAATTAAACGACCGAAGTAGCCATGAGCTGCAACGATGTTGTAAGT 85505 Query 18134 CTCTTCTTCTTGGCCAAATTTATATCCATAGTTCTGAGACTCAAGCTCAGTCGTTTCTCT 18193 ||||||||||| || ||||| || || | ||| || || ||||| ||||| | Sbjct 85506 TTCTTCTTCTTGACCGAATTTGTAACCTTCGTTAGCTGATTCGTTTTCAGTTGTTTCACG 85565 Query 18194 AATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAATAC 18253 ||| | || ||||| ||||| ||||||||||||| |||||| | ||||| ||||| Sbjct 85566 AATTAAAGAAGAAGTTACAAGTGAACCGTGCATAGCAGAGAATAATGAACCACCAAATAC 85625 Query 18254 CCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCGGCTTGGAATAC 18313 || |||||||| ||||||||||| || ||||||||||| ||||| || ||||||||||| Sbjct 85626 ACCAGCAACACCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCAGCTTGGAATAC 85685 Query 18314 GAACATGAAATTGAAAGTACCGCTAATACCAAGAGGCATACCATCAGAGAAACTCCCTTG 18373 || |||||| ||||||||||| ||||| | ||||||||||||||||||| ||||| Sbjct 85686 GATCATGAAGTTGAAAGTACCAGAGATACCTAAAGGCATACCATCAGAGAAAGAACCTTG 85745 Query 18374 TCCAAAAGGATAAACGAGAAATACTGAGAAGGCAGCTGCTACTGGTGCGGAATAAGCAAC 18433 || | ||||||| || ||||| | || || || |||||||| || |||||||| Sbjct 85746 ACCGATTGGATAAATGATGAATACAGCTGTAGCTGCAGCAACTGGTGCTGAGTAAGCAAC 85805 Query 18434 ACAAATCCACGGGCGCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCATGTAAGC 18493 ||||| || |||||||||| | | || | |||||| | || |||||||| | Sbjct 85806 TGCGATCCAAGGACGCATACCTAAACGAAAAGATAATTCCCACTCACGACCCATGTATGA 85865 Query 18494 TGCGATGCCGATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATATAACCA 18553 | ||| | || || ||| | || || ||||| || || || || || |||||||| Sbjct 85866 ACAAACGCCTAAGAAGAAATGGCAAACGATAAGTTGGTAAGGACCACCATTGTATAACCA 85925 Query 18554 CTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAGATGA 18613 ||| || || | || |||||||| |||||||||||||| | |||||| |||||||| | Sbjct 85926 CTCATCAAGAGAAGCTGCTTCCCAAATTGGGTAGAAGTGTAAACCGATAGCGTTAGAAGT 85985 Query 18614 CGGGACGATTGCCCCTGATATGATGTTGTTTCCATAGAGTAAGGCTCCTGAGACAGGCTC 18673 || | || || || | ||||| ||||||||||| ||||| | ||||| |||||||| Sbjct 85986 TGGAATAATAGCACCAGTGATGATATTGTTTCCATATAGTAATGAACCTGAAACAGGCTC 86045 Query 18674 ACGAATACCATCTATGTCAACGGGAGGAGCAGCAACAAATGCAATCAAAAATGCTGTAGC 18733 ||| |||||||| || || || || ||||| || | |||||| || | |||| ||| || Sbjct 86046 ACGGATACCATCGATATCGACAGGCGGAGCTGCGATAAATGCGATGATAAATACTGAAGT 86105 Query 18734 TGCGGTTAAAAGTGCAGGGATCATAAGTACCCCAAACCACCCCACGTAGAGGCGGTTGTT 18793 || ||||| | | ||||||||| | || |||||||| || | ||| | ||||| | Sbjct 86106 AGCTGTTAATAAAGTAGGGATCATTAACACACCAAACCAACCGATGTATAAACGGTTTTC 86165 Query 18794 TGTACTCGTAACCCAGTCACATAAAC 18819 || || || ||||| ||||| |||| Sbjct 86166 AGTGCTAGTTACCCACTCACAAAAAC 86191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151317859131294