Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_020837.1 Length=198013 Score E Sequences producing significant alignments: (Bits) Value seq52 646 1e-180 >seq52 Length=149364 Score = 646 bits (716), Expect = 1e-180 Identities = 737/995 (74%), Gaps = 3/995 (0%) Strand=Plus/Plus Query 103187 GGGAAGTTGTGAGCGTTACGCTCGTGCATGACTTCCATACCCAGACCAGCGCGGTTGAGA 103246 ||||||||||||||||||||||| ||||| ||||||||||| || || ||||||| | Sbjct 85219 GGGAAGTTGTGAGCGTTACGCTCATGCATTACTTCCATACCAAGGTTGGCACGGTTGATA 85278 Query 103247 ACGTCTGCCCAGGTGTTCAACACACGACCCTGACCATCAAGGATGGACTGGTTGAAGTTG 103306 | ||||||||| ||||| | |||||||| || ||| | | || |||||||||||| Sbjct 85279 ATGTCTGCCCAAGTGTTGATTACACGACCTTGTGAATCTACAACTGATTGGTTGAAGTTG 85338 Query 103307 AATCCGTTCAGGTTGAACGCCATGGTGCTAACACCAAGTGCGGTGAACCAGATACCCACT 103366 || || || | |||||| ||||| || || ||| | || |||||||| ||||| || Sbjct 85339 AAACCATTTAAGTTGAATGCCATAGTTGAAATACCTAAAGCAGTGAACCAAATACCAACA 85398 Query 103367 ACTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAGTTGTTGAATGATGCGTATTGG 103426 ||||| | ||||||||||| || || |||||| Sbjct 85399 ACTGGCCAAGCAGCTAAGAAGAAATGTAATGAACGAGAGTTGTTGAAAGAAGCATATTGG 85458 Query 103427 AAGATCAAACGACCGAAGTAACCATGAGCGGCTACGATGTTGTATGTCTCTTCCTCTTGT 103486 || || |||||||||||||| |||||||| || ||||||||||| || ||||| ||||| Sbjct 85459 AAAATTAAACGACCGAAGTAGCCATGAGCTGCAACGATGTTGTAAGTTTCTTCTTCTTGA 85518 Query 103487 CCGAACTTGTAACCATAGTTTTGAGATTCAGTTTCAGTCGTCTCACGAACCAGCGAGGAC 103546 ||||| |||||||| | ||| ||||| ||||||| || ||||||| | || || Sbjct 85519 CCGAATTTGTAACCTTCGTTAGCTGATTCGTTTTCAGTTGTTTCACGAATTAAAGAAGAA 85578 Query 103547 GTAACAAGCGAACCGTGCATAGCACTGAACAGTGAACCACCGAAGACTCCAGCAACGCCC 103606 || ||||| ||||||||||||||| ||| | ||||||||| || || |||||||| || Sbjct 85579 GTTACAAGTGAACCGTGCATAGCAGAGAATAATGAACCACCAAATACACCAGCAACACCA 85638 Query 103607 AGCATGTGGAAGGGGTGCATGAGAATGTTATGTTCGGCTTGGAAGACCAGCATGTAGTTG 103666 ||||| ||||| |||||||| || ||||| || || |||||||| || | |||| ||||| Sbjct 85639 AGCATATGGAATGGGTGCATAAGGATGTTGTGCTCAGCTTGGAATACGATCATGAAGTTG 85698 Query 103667 AAGGTTCCCGAAATACCCAAAGGCATAGCATCGGAGAACGAACCTTGACCAAAGGGGTAG 103726 || || || || ||||| ||||||||| |||| ||||| ||||||||||| | || || Sbjct 85699 AAAGTACCAGAGATACCTAAAGGCATACCATCAGAGAAAGAACCTTGACCGATTGGATAA 85758 Query 103727 ACCAAGAATACTGCGGACGCAGCCGCAACAGGAGCAGAGTATGCGACACAGATCCAGGGG 103786 | | |||||| || | || || ||||| || || ||||| || || |||||| || Sbjct 85759 ATGATGAATACAGCTGTAGCTGCAGCAACTGGTGCTGAGTAAGCAACTGCGATCCAAGGA 85818 Query 103787 CGCATGCCCAGACGGTAGGACAATTCCCACTCACGTCCCATATATGCATAGATGCCAATG 103846 ||||| || | ||| | || |||||||||||||| ||||| |||| | | | ||| | | Sbjct 85819 CGCATACCTAAACGAAAAGATAATTCCCACTCACGACCCATGTATGAACAAACGCCTAAG 85878 Query 103847 AGGAAGTGGAATACTACAAGTTGGAAAGGACCACCGTTATACAGCCACTCATCAAGAGAT 103906 | ||| ||| | || | ||||||| |||||||||| || || | ||||||||||||||| Sbjct 85879 AAGAAATGGCAAACGATAAGTTGGTAAGGACCACCATTGTATAACCACTCATCAAGAGAA 85938 Query 103907 GCTGCTTCCCAAATGGGATAGAAGTGAAGACCAATTGCGTTGGAGGAGGGAACAACTGCA 103966 |||||||||||||| || |||||||| | ||| || ||||| || | |||| || ||| Sbjct 85939 GCTGCTTCCCAAATTGGGTAGAAGTGTAAACCGATAGCGTTAGAAGTTGGAATAATAGCA 85998 Query 103967 CCAGAGATGATGTTGTTACCGTACATGAGTGAACCAGCGACGGGTTCACGAATGCCGTCG 104026 |||| |||||| ||||| || || | | |||||| | || || ||||| || || ||| Sbjct 85999 CCAGTGATGATATTGTTTCCATATAGTAATGAACCTGAAACAGGCTCACGGATACCATCG 86058 Query 104027 ATATCGACGGGAGGTGCTGCTACGAAAGCAACGATGAA-GCAGATGGTTGCCGCCAACAG 104085 |||||||| || || ||||| | || || | ||| || | || || || | || | Sbjct 86059 ATATCGACAGGCGGAGCTGCGATAAATGCGATGATAAATACTGA-AGTAGCTGTTAATAA 86117 Query 104086 AGTTGGGATCATCAGCACACCGAACCAACCAACATAGAGACGGTTGTTTGTCGATGTAAC 104145 ||| |||||||| | |||||| |||||||| | || | |||||| | || || || Sbjct 86118 AGTAGGGATCATTAACACACCAAACCAACCGATGTATAAACGGTTTTCAGTGCTAGTTAC 86177 Query 104146 CCACTCGCAGAAGTTATCCCACGAGGATTGTGATT 104180 |||||| || || | |||| ||| ||||| || Sbjct 86178 CCACTCACAAAAACGAGCCCA-AAGGCTTGTGCTT 86211 Score = 369 bits (408), Expect = 5e-97 Identities = 508/705 (72%), Gaps = 4/705 (1%) Strand=Plus/Plus Query 102023 TAACCATTGAATAAGTCTCTTCCTCTTGTGTGGAATCGAATGCTTTGAAAGTGTTTGCTT 102082 |||||||||| || || ||||| |||| || | | || || ||| |||||||| Sbjct 17393 TAACCATTGAGTATGTTTCTTCAGCTTGAGTTGGGTTAAAAGCACGGAATGTGTTTGCAC 17452 Query 102083 GATCACCATCTTCATACAGAGTGTTCTCCACAGTGACACCGTGGATTGCTGACAGCAGTG 102142 ||||||||| ||| | || || || || ||||| | || || ||||| | || || | Sbjct 17453 CATCACCATCCTCAAAAAGCGTATTTTCTACAGTTGCGCCATGAATTGCACAAAGTAGAG 17512 Query 102143 CTCCTCCCAGGATACCTGCAACACCCATCATATGGAATGGGTTGAGCGTCCAGTTATGGA 102202 | |||| || | ||| || ||||||||||||||||| ||||| | ||||||||||||| Sbjct 17513 CAGCTCCAAGTACACCCGCTACACCCATCATATGGAAAGGGTTTAAAGTCCAGTTATGGA 17572 Query 102203 AGCCCTGTAGGAAGAGTAGGAATCTAAATATCGCTGCAACACCAAACGAGGGCGCAAAGA 102262 | || || | ||| | | ||||| || || || ||||||||||| || ||||||| Sbjct 17573 AACCTTGGAAGAATAAAATGAATCGGAAAATTGCAGCAACACCAAAGCTTGGTGCAAAGA 17632 Query 102263 ACCAACTGGACTGTCCGAGAGGATAGATGAGAAACACACTGACAAAAACAGCGATAGGCC 102322 |||||| || ||||| | ||| || || | || ||| || || |||| || || Sbjct 17633 ACCAACCAGATTGTCCTAAAGGGTAAATTAAGAATACAGAAACGAATACAGAAATTGGTG 17692 Query 102323 CAGAGAACGCAATAGCATTGTACGGACGAAT-TCCAATTAACCTAGCCAACTCGAATTGA 102381 | || || ||||| || ||||| || ||||| | | | ||| | || | || || ||| Sbjct 17693 CTGAAAATGCAATTGCGTTGTAAGGGCGAATCTTTACTGAACGT-GCAATTTCAAACTGA 17751 Query 102382 CGAAGCATGAAACCAATGAGGGCAAATGCACCGTGGAGAGCCACAAAAGCCCAGAGTCCC 102441 |||||||| |||||||| || |||||||||||||| ||||| ||||| | ||| || || Sbjct 17752 CGAAGCATAAAACCAATCAGAGCAAATGCACCGTGAAGAGCAACAAACGTCCATAGACCA 17811 Query 102442 CCAAGTTG-GACCCACCTGACGAAATCTCCTTGAGCTTCAGGACCCCAAAGTAGAAGAAG 102500 |||||||| ||| || || |||||| ||||||||||| || |||||||| | | | Sbjct 17812 CCAAGTTGACACCAACGTG-TGAAATCGCCTTGAGCTTCTGGGCCCCAAAGGAATAATAA 17870 Query 102501 AGAATGACCCATAGAGTCAGCAGGCGTTGACACAGCAGCTGTAAGGAAATTAGCACCTTC 102560 ||||||||||||| | || || ||||| ||||| ||||| | ||||||| ||||| Sbjct 17871 AGAATGACCCATACTATTCGCTGGAGTTGAAACAGCTGCTGTTAAGAAATTACATCCTTC 17930 Query 102561 AAGGTAACTAGACGCAAGCCCGTGGGTATACCAGGAAGTAGCAAACGTCGTGCCAGTAAG 102620 | || ||| || | || || |||||||| || || |||| || || || |||| Sbjct 17931 TAAATATGAAGATGCTAAACCATGAGTATACCAAGACGTTACAAATGTAGTTCCTGTAAA 17990 Query 102621 CCAGCCCCCAATTGCGAGATAAGCAGTGGGAAAAAGAAGTAGTCCAGACCAACCCACAAA 102680 ||| || |||| ||| || || || || || || | | || || ||||| || | ||| Sbjct 17991 CCAACCACCAAGTGCCAGGTATGCTGTAGGCAATAATAATAACCCTGACCATCCTAGAAA 18050 Query 102681 GACAAAGCGATCTCGTTTAATCCAGTCATCCAGGATGTCAAACCA 102725 ||| || || || || || ||||||||| | | |||||||| Sbjct 18051 GACGAAACGGTCACGACGAAGCCAGTCATCTACTACATCAAACCA 18095 Score = 369 bits (408), Expect = 5e-97 Identities = 508/705 (72%), Gaps = 4/705 (1%) Strand=Plus/Plus Query 102023 TAACCATTGAATAAGTCTCTTCCTCTTGTGTGGAATCGAATGCTTTGAAAGTGTTTGCTT 102082 |||||||||| || || ||||| |||| || | | || || ||| |||||||| Sbjct 146838 TAACCATTGAGTATGTTTCTTCAGCTTGAGTTGGGTTAAAAGCACGGAATGTGTTTGCAC 146897 Query 102083 GATCACCATCTTCATACAGAGTGTTCTCCACAGTGACACCGTGGATTGCTGACAGCAGTG 102142 ||||||||| ||| | || || || || ||||| | || || ||||| | || || | Sbjct 146898 CATCACCATCCTCAAAAAGCGTATTTTCTACAGTTGCGCCATGAATTGCACAAAGTAGAG 146957 Query 102143 CTCCTCCCAGGATACCTGCAACACCCATCATATGGAATGGGTTGAGCGTCCAGTTATGGA 102202 | |||| || | ||| || ||||||||||||||||| ||||| | ||||||||||||| Sbjct 146958 CAGCTCCAAGTACACCCGCTACACCCATCATATGGAAAGGGTTTAAAGTCCAGTTATGGA 147017 Query 102203 AGCCCTGTAGGAAGAGTAGGAATCTAAATATCGCTGCAACACCAAACGAGGGCGCAAAGA 102262 | || || | ||| | | ||||| || || || ||||||||||| || ||||||| Sbjct 147018 AACCTTGGAAGAATAAAATGAATCGGAAAATTGCAGCAACACCAAAGCTTGGTGCAAAGA 147077 Query 102263 ACCAACTGGACTGTCCGAGAGGATAGATGAGAAACACACTGACAAAAACAGCGATAGGCC 102322 |||||| || ||||| | ||| || || | || ||| || || |||| || || Sbjct 147078 ACCAACCAGATTGTCCTAAAGGGTAAATTAAGAATACAGAAACGAATACAGAAATTGGTG 147137 Query 102323 CAGAGAACGCAATAGCATTGTACGGACGAAT-TCCAATTAACCTAGCCAACTCGAATTGA 102381 | || || ||||| || ||||| || ||||| | | | ||| | || | || || ||| Sbjct 147138 CTGAAAATGCAATTGCGTTGTAAGGGCGAATCTTTACTGAACGT-GCAATTTCAAACTGA 147196 Query 102382 CGAAGCATGAAACCAATGAGGGCAAATGCACCGTGGAGAGCCACAAAAGCCCAGAGTCCC 102441 |||||||| |||||||| || |||||||||||||| ||||| ||||| | ||| || || Sbjct 147197 CGAAGCATAAAACCAATCAGAGCAAATGCACCGTGAAGAGCAACAAACGTCCATAGACCA 147256 Query 102442 CCAAGTTG-GACCCACCTGACGAAATCTCCTTGAGCTTCAGGACCCCAAAGTAGAAGAAG 102500 |||||||| ||| || || |||||| ||||||||||| || |||||||| | | | Sbjct 147257 CCAAGTTGACACCAACGTG-TGAAATCGCCTTGAGCTTCTGGGCCCCAAAGGAATAATAA 147315 Query 102501 AGAATGACCCATAGAGTCAGCAGGCGTTGACACAGCAGCTGTAAGGAAATTAGCACCTTC 102560 ||||||||||||| | || || ||||| ||||| ||||| | ||||||| ||||| Sbjct 147316 AGAATGACCCATACTATTCGCTGGAGTTGAAACAGCTGCTGTTAAGAAATTACATCCTTC 147375 Query 102561 AAGGTAACTAGACGCAAGCCCGTGGGTATACCAGGAAGTAGCAAACGTCGTGCCAGTAAG 102620 | || ||| || | || || |||||||| || || |||| || || || |||| Sbjct 147376 TAAATATGAAGATGCTAAACCATGAGTATACCAAGACGTTACAAATGTAGTTCCTGTAAA 147435 Query 102621 CCAGCCCCCAATTGCGAGATAAGCAGTGGGAAAAAGAAGTAGTCCAGACCAACCCACAAA 102680 ||| || |||| ||| || || || || || || | | || || ||||| || | ||| Sbjct 147436 CCAACCACCAAGTGCCAGGTATGCTGTAGGCAATAATAATAACCCTGACCATCCTAGAAA 147495 Query 102681 GACAAAGCGATCTCGTTTAATCCAGTCATCCAGGATGTCAAACCA 102725 ||| || || || || || ||||||||| | | |||||||| Sbjct 147496 GACGAAACGGTCACGACGAAGCCAGTCATCTACTACATCAAACCA 147540 Score = 201 bits (222), Expect = 1e-46 Identities = 233/314 (74%), Gaps = 0/314 (0%) Strand=Plus/Plus Query 101710 AGAGCGTTGCCTCTTGGCAATACCTCTTCAGGAAATACAAAGTTTTCATGCGGTTGATCG 101769 |||||||| || | ||| || ||||| ||||| ||||||| |||||||| || ||||| Sbjct 16035 AGAGCGTTTCCACGTGGTAAAACCTCCTCAGGGAATACAAGTTTTTCATGAGGCTGATCT 16094 Query 101770 ACTGGTGCCAACCATGCACGTAGACCTTCATTCAATAGGATGTTCTTTGTGTAGAACGTC 101829 | |||| ||| ||||| | |||||| || || || || || ||||| ||||| || Sbjct 16095 TGAGCAGCCATCCAAGCACGAATACCTTCGTTTAAAAGAATATTTTTTGTATAGAAAGTT 16154 Query 101830 TCGAACTCTGGATCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCACGAAGG 101889 || || || |||||||| || || | || ||||| || || || ||||| ||||| | | Sbjct 16155 TCAAATTCAGGATCTTCCGCAGCGCGAATTTCTTGTGAAACGAAATCATACGCACGTAAG 16214 Query 101890 TTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCACAGACCCATAACAGGAACAAAG 101949 || | ||| | ||| | | ||| || | ||| |||| ||||| | || |||||||| Sbjct 16215 TTTAAAGCTAAACCTACTACACCAATTGCACTCATCCAAAGACCAGTTACCGGAACAAAT 16274 Query 101950 AGCATAAAGAAATGCAACCACCTCTTATTACTAAATGCAATACCAAAGATTTGAGACCAG 102009 | ||||||||| || ||||| | ||||| ||| || | |||||| ||||| |||||| Sbjct 16275 AACATAAAGAAGTGTAACCAACGTTTATTTGAAAAAGCTACACCAAAAATTTGTGACCAG 16334 Query 102010 AAACGGTTTGCTGT 102023 ||||| ||||| || Sbjct 16335 AAACGATTTGCAGT 16348 Score = 201 bits (222), Expect = 1e-46 Identities = 233/314 (74%), Gaps = 0/314 (0%) Strand=Plus/Plus Query 101710 AGAGCGTTGCCTCTTGGCAATACCTCTTCAGGAAATACAAAGTTTTCATGCGGTTGATCG 101769 |||||||| || | ||| || ||||| ||||| ||||||| |||||||| || ||||| Sbjct 145480 AGAGCGTTTCCACGTGGTAAAACCTCCTCAGGGAATACAAGTTTTTCATGAGGCTGATCT 145539 Query 101770 ACTGGTGCCAACCATGCACGTAGACCTTCATTCAATAGGATGTTCTTTGTGTAGAACGTC 101829 | |||| ||| ||||| | |||||| || || || || || ||||| ||||| || Sbjct 145540 TGAGCAGCCATCCAAGCACGAATACCTTCGTTTAAAAGAATATTTTTTGTATAGAAAGTT 145599 Query 101830 TCGAACTCTGGATCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCACGAAGG 101889 || || || |||||||| || || | || ||||| || || || ||||| ||||| | | Sbjct 145600 TCAAATTCAGGATCTTCCGCAGCGCGAATTTCTTGTGAAACGAAATCATACGCACGTAAG 145659 Query 101890 TTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCACAGACCCATAACAGGAACAAAG 101949 || | ||| | ||| | | ||| || | ||| |||| ||||| | || |||||||| Sbjct 145660 TTTAAAGCTAAACCTACTACACCAATTGCACTCATCCAAAGACCAGTTACCGGAACAAAT 145719 Query 101950 AGCATAAAGAAATGCAACCACCTCTTATTACTAAATGCAATACCAAAGATTTGAGACCAG 102009 | ||||||||| || ||||| | ||||| ||| || | |||||| ||||| |||||| Sbjct 145720 AACATAAAGAAGTGTAACCAACGTTTATTTGAAAAAGCTACACCAAAAATTTGTGACCAG 145779 Query 102010 AAACGGTTTGCTGT 102023 ||||| ||||| || Sbjct 145780 AAACGATTTGCAGT 145793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633511216405080