Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_020838.1 Length=45728 Score E Sequences producing significant alignments: (Bits) Value seq52 600 4e-167 >seq52 Length=149364 Score = 600 bits (664), Expect = 4e-167 Identities = 662/879 (75%), Gaps = 2/879 (0%) Strand=Plus/Plus Query 21483 GGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAGCCAAGGTTGGCACGGTTAAGA 21542 ||||||||||| ||||| ||||||||||| || || | ||||||||||||||||| | | Sbjct 85219 GGGAAGTTGTGAGCGTTACGCTCATGCATTACTTCCATACCAAGGTTGGCACGGTTGATA 85278 Query 21543 ATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAGCTAGCAGAGATTGGTTAAAGTTG 21602 ||||| ||||| |||||||| || | || | | | ||| | |||||||| |||||| Sbjct 85279 ATGTCTGCCCAAGTGTTGATTACACGACCTTGTGAATCTACAACTGATTGGTTGAAGTTG 85338 Query 21603 AAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAAGCGCAGCAAACCAAATACCTACA 21662 |||||||| |||||||| ||||| || || | || | |||| ||||||||||| ||| Sbjct 85339 AAACCATTTAAGTTGAATGCCATAGTTGAAATACCTAAAGCAGTGAACCAAATACCAACA 85398 Query 21663 ACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATTAAAGCTAGCATATTGG 21722 || ||||| ||||| | |||||||| | ||| || || || || |||||||||| Sbjct 85399 ACTGGCCAAGCAGCTAAGAAGAAATGTAATGAACGAGAGTTGTTGAAAGAAGCATATTGG 85458 Query 21723 AAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAATATTGTAAGTCTCTTCCTCTTGA 21782 || || | ||||| || ||||| ||||| ||||| || |||||||| ||||| |||||| Sbjct 85459 AAAATTAAACGACCGAAGTAGCCATGAGCTGCAACGATGTTGTAAGTTTCTTCTTCTTGA 85518 Query 21783 CCAAACTTGTAACCATAGTTCTGTGAAACCTCTTCAGTCGTCTCACGAATGAGTGACGAC 21842 || || |||||||| | ||| ||| | | |||||| || |||||||| | || || Sbjct 85519 CCGAATTTGTAACCTTCGTTAGCTGATTCGTTTTCAGTTGTTTCACGAATTAAAGAAGAA 85578 Query 21843 GTGACCAGGCTACCGTGCATAGCAGAGAACAAACTCCCACCAAATACGCCGGCCACACCC 21902 || || || |||||||||||||||||| || ||||||||||| || || ||||| Sbjct 85579 GTTACAAGTGAACCGTGCATAGCAGAGAATAATGAACCACCAAATACACCAGCAACACCA 85638 Query 21903 AGCATGTGAAAAGGATGCATAAGAATATTGTGCTCAGCCTGGAACACCAGCATGTAGTTG 21962 ||||| || || || |||||||| || ||||||||||| ||||| || | |||| ||||| Sbjct 85639 AGCATATGGAATGGGTGCATAAGGATGTTGTGCTCAGCTTGGAATACGATCATGAAGTTG 85698 Query 21963 AAGGTGCCGGATATCCCCAAGGGCATAGCATCAGAAAAAGAGCCCTGTCCAAACGGATAA 22022 || || || || || || || |||||| ||||||| ||||| || || || | |||||| Sbjct 85699 AAAGTACCAGAGATACCTAAAGGCATACCATCAGAGAAAGAACCTTGACCGATTGGATAA 85758 Query 22023 ACAAGGAACACAGCAGTCGCAGCGGCGACAGGAGCAGAGTACGCAACAAAGATCCAGGGC 22082 | | ||| ||||| || || || || || || || ||||| ||||| |||||| || Sbjct 85759 ATGATGAATACAGCTGTAGCTGCAGCAACTGGTGCTGAGTAAGCAACTGCGATCCAAGGA 85818 Query 22083 CTCATCCCTAGTCG-ATAGCTAAGTTCCCACTCTCGTCCCATGTAAGCAAAGACGCCAAT 22141 | ||| |||| || | || ||| ||||||||| || |||||||| | | | ||||| | Sbjct 85819 CGCATACCTAAACGAAAAGATAA-TTCCCACTCACGACCCATGTATGAACAAACGCCTAA 85877 Query 22142 GAGGAAGTGGAATACGGTGAGTTGGAATGGACCGCCGTTGTACAGCCATTCATCAAGTGT 22201 || ||| ||| | ||| | |||||| | ||||| || ||||| | ||| |||||||| | Sbjct 85878 GAAGAAATGGCAAACGATAAGTTGGTAAGGACCACCATTGTATAACCACTCATCAAGAGA 85937 Query 22202 AGCAGCTTCCCAAATTGGGTAGAAGTGTAGTCCGATGGCATTACTGCTCGGAACGACGGC 22261 ||| ||||||||||||||||||||||||| ||||| || ||| | |||| | || Sbjct 85938 AGCTGCTTCCCAAATTGGGTAGAAGTGTAAACCGATAGCGTTAGAAGTTGGAATAATAGC 85997 Query 22262 TCCTGATATGATGTTGTTACCATACAACAGGGAGCCAGCGACGGGTTCTCGGATTCCATC 22321 || | ||||| ||||| ||||| | | || || | || || || ||||| ||||| Sbjct 85998 ACCAGTGATGATATTGTTTCCATATAGTAATGAACCTGAAACAGGCTCACGGATACCATC 86057 Query 22322 GATGTCAACAGGTGGTGCGCCAACAAAGGCGATAATAAA 22360 ||| || ||||| || || | | ||| ||||| ||||| Sbjct 86058 GATATCGACAGGCGGAGCTGCGATAAATGCGATGATAAA 86096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146207477397780