Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq52 673 0.0 >seq52 Length=149364 Score = 673 bits (746), Expect = 0.0 Identities = 739/983 (75%), Gaps = 0/983 (0%) Strand=Plus/Plus Query 124049 GCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCCAAGTTT 124108 |||| |||| |||||||||||| || || | |||||||| ||||||||||| | ||| Sbjct 85207 GCTAAATCTAATGGGAAGTTGTGAGCGTTACGCTCATGCATTACTTCCATACCAAGGTTG 85266 Query 124109 GCTCTGTTTAGAACATCACCCCATGTTGGGACGATTTTTCCGTTAGCATCAACAACTGAT 124168 || | ||| | || || |||| || || | || | | ||| ||||||||| Sbjct 85267 GCACGGTTGATAATGTCTGCCCAAGTGTTGATTACACGACCTTGTGAATCTACAACTGAT 85326 Query 124169 TGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGATACCCATAGAGGTTAAC 124228 ||||| |||||||||||||| |||||||||||||| || | ||||| | || || ||| Sbjct 85327 TGGTTGAAGTTGAAACCATTTAAGTTGAATGCCATAGTTGAAATACCTAAAGCAGTGAAC 85386 Query 124229 CATACACATACAACAGGGAAAACTGCTAGGAAGAAGTGAAGACTTCTTGAGTTGTTGAAT 124288 || | || ||||| || || | |||| |||||| || | | ||||||||||| Sbjct 85387 CAAATACCAACAACTGGCCAAGCAGCTAAGAAGAAATGTAATGAACGAGAGTTGTTGAAA 85446 Query 124289 GAAGCATACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGCTACTATGTTGTATGTT 124348 |||||||| ||||| || | |||||| ||||| || || ||||| || |||||||| ||| Sbjct 85447 GAAGCATATTGGAAAATTAAACGACCGAAGTAGCCATGAGCTGCAACGATGTTGTAAGTT 85506 Query 124349 TCTTCTTCTTGTCCGAACTTATAACCATAGTTCTGTGACTCTTGCTCTGTTGTTTCTCTG 124408 ||||||||||| ||||| || ||||| | ||| ||| || | || |||||||| | Sbjct 85507 TCTTCTTCTTGACCGAATTTGTAACCTTCGTTAGCTGATTCGTTTTCAGTTGTTTCACGA 85566 Query 124409 ATTAGAGAAGATGTAACAAGAGAACCATGCATTGCTGAGAATAAAGATCCTCCGAACATT 124468 |||| |||||| || ||||| ||||| ||||| || |||||||| || || || || | Sbjct 85567 ATTAAAGAAGAAGTTACAAGTGAACCGTGCATAGCAGAGAATAATGAACCACCAAATACA 85626 Query 124469 CCTGCTACTCCTGCCATGTGGAAAGGATGCATTAGAATGTTATGCTCTGCTTGGAAAACG 124528 || || || || ||| ||||| || ||||| || ||||| ||||| |||||||| ||| Sbjct 85627 CCAGCAACACCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCAGCTTGGAATACG 85686 Query 124529 AACATAAAGTTGAAAGTACCTGAGATACCAAGTGGCATACCATCAGAGAATGAACCCTGA 124588 | ||| |||||||||||||| |||||||| | ||||||||||||||||| ||||| ||| Sbjct 85687 ATCATGAAGTTGAAAGTACCAGAGATACCTAAAGGCATACCATCAGAGAAAGAACCTTGA 85746 Query 124589 CCAAATGGGTATACTAAGAATACAGCGAATGCAGCAGATACTGGTGCTGAATAAGCAACA 124648 || | ||| || | | ||||||||| || |||| ||||||||||| |||||||| Sbjct 85747 CCGATTGGATAAATGATGAATACAGCTGTAGCTGCAGCAACTGGTGCTGAGTAAGCAACT 85806 Query 124649 CAGATCCAAGGACGCATTCCTAATCTGTATGATAGTTCCCACTGTCTTCCCATGTATGCT 124708 ||||||||||||||| ||||| | | |||| |||||||| | |||||||||| Sbjct 85807 GCGATCCAAGGACGCATACCTAAACGAAAAGATAATTCCCACTCACGACCCATGTATGAA 85866 Query 124709 GAAATACCAATAAGGAAGTGGAAAATTACCAACTGATAAGGACCACCATTATACAACCAT 124768 ||| || | | ||| ||| ||| | | || |||||||||||||| || ||||| Sbjct 85867 CAAACGCCTAAGAAGAAATGGCAAACGATAAGTTGGTAAGGACCACCATTGTATAACCAC 85926 Query 124769 TCATCAACAGTTGCTGCTTCCCAGATTGGGTAGAAGTGTAGTCCGATAGCGTTTGATGAT 124828 ||||||| || ||||||||||| |||||||||||||||| ||||||||||| || | | Sbjct 85927 TCATCAAGAGAAGCTGCTTCCCAAATTGGGTAGAAGTGTAAACCGATAGCGTTAGAAGTT 85986 Query 124829 GGAACAACTGCACCAGAGATGATGTTGTTACCATATAAGAAAGAACCCGCTACTGGTTCT 124888 |||| || ||||||| |||||| ||||| ||||||| || ||||| | || || || Sbjct 85987 GGAATAATAGCACCAGTGATGATATTGTTTCCATATAGTAATGAACCTGAAACAGGCTCA 86046 Query 124889 CTGATTCCGTCGATATCGACAGGAGGTGCTGCAATAAATGCAACGATGAAACATGCTGCT 124948 | ||| || |||||||||||||| || ||||| |||||||| | ||| || || | Sbjct 86047 CGGATACCATCGATATCGACAGGCGGAGCTGCGATAAATGCGATGATAAATACTGAAGTA 86106 Query 124949 GCTGTGAGTAAGCATGGAATCATTAGAACACCAAACCAACCAACATAAATTCTGTTGTTT 125008 ||||| | ||| || ||||||| |||||||||||||| | || | | ||| | Sbjct 86107 GCTGTTAATAAAGTAGGGATCATTAACACACCAAACCAACCGATGTATAAACGGTTTTCA 86166 Query 125009 GTTGATGTTACCCACTCACAGAA 125031 || |||||||||||||| || Sbjct 86167 GTGCTAGTTACCCACTCACAAAA 86189 Score = 288 bits (318), Expect = 1e-72 Identities = 435/619 (70%), Gaps = 0/619 (0%) Strand=Plus/Plus Query 123293 ACTGTTGCACCATGAATGGCACATAGTAATGCTCCACCTAGTATTCCTGCAACACCCATC 123352 || ||||| |||||||| ||||| |||| || | || |||| || || ||||||||| Sbjct 17482 ACAGTTGCGCCATGAATTGCACAAAGTAGAGCAGCTCCAAGTACACCCGCTACACCCATC 17541 Query 123353 ATGTGAAATGGATTCAATGTAATGTTGTGGAAACCTTGTATGAATAAGATATAACGAAAG 123412 || || || || || || || ||| ||||||||||| | |||||| || | || || Sbjct 17542 ATATGGAAAGGGTTTAAAGTCCAGTTATGGAAACCTTGGAAGAATAAAATGAATCGGAAA 17601 Query 123413 ATTGCTGCGACACCGAATGATGGTGCGAAGAACCAACTGTGCTGACCTAGTGGATAGATC 123472 ||||| || ||||| || |||||| |||||||||| || |||| || || || Sbjct 17602 ATTGCAGCAACACCAAAGCTTGGTGCAAAGAACCAACCAGATTGTCCTAAAGGGTAAATT 17661 Query 123473 AGAAAGATGCTAGTGAAGACTGCGATAACAGCAGAGAATGCGAGTGCGTTGTAAGGTCTA 123532 | || | | ||| || | || || || ||||| | |||||||||||| | | Sbjct 17662 AAGAATACAGAAACGAATACAGAAATTGGTGCTGAAAATGCAATTGCGTTGTAAGGGCGA 17721 Query 123533 ATGCCTACAAGTCCTGCGATCTCAAATTGTCTGAGCATGAAACCTATGAGTCCAAAGACT 123592 || ||| | ||| || ||||| || | ||||| ||||| || || |||| | Sbjct 17722 ATCTTTACTGAACGTGCAATTTCAAACTGACGAAGCATAAAACCAATCAGAGCAAATGCA 17781 Query 123593 CCATGTAATGCTACAAAGTTCCATAGACCTCCGAGTTGTAACCAACGAACGAATGATCCT 123652 || || | || ||||| |||||||||| || ||||| ||||||| ||| ||| Sbjct 17782 CCGTGAAGAGCAACAAACGTCCATAGACCACCAAGTTGACACCAACGTGTGAAATCGCCT 17841 Query 123653 TGTGCTTCAGGTCCCCAAAGGAACATGAGACTATGACCCATTGCGTCACCAGGTGTGGAG 123712 || ||||| || ||||||||||| | | | ||||||||| | | || || || Sbjct 17842 TGAGCTTCTGGGCCCCAAAGGAATAATAAAGAATGACCCATACTATTCGCTGGAGTTGAA 17901 Query 123713 ACTGCTGCTGTTAAGAAGTTTGCTCCCTCAAGATATGAAGATGCAATACCATGTGTATAC 123772 || |||||||||||||| || ||| || | |||||||||||| | |||||| |||||| Sbjct 17902 ACAGCTGCTGTTAAGAAATTACATCCTTCTAAATATGAAGATGCTAAACCATGAGTATAC 17961 Query 123773 CATGATGTAACGAAGGTAGTTCCTAAGAACCAACCACCGATTGATAGATACGCACAAGGC 123832 || || || || || ||||||||| ||||||||||| | || || || || |||| Sbjct 17962 CAAGACGTTACAAATGTAGTTCCTGTAAACCAACCACCAAGTGCCAGGTATGCTGTAGGC 18021 Query 123833 AGAAGTAAAAGACCAGACCATCCTATGAATACAAAACGATCTCTCTTTAACCAGTCGTCA 123892 | | ||| | || |||||||||| || || ||||| || | | |||||| || Sbjct 18022 AATAATAATAACCCTGACCATCCTAGAAAGACGAAACGGTCACGACGAAGCCAGTCATCT 18081 Query 123893 AGAACATCAAACCAACCTC 123911 | |||||||||||||||| Sbjct 18082 ACTACATCAAACCAACCTC 18100 Score = 288 bits (318), Expect = 1e-72 Identities = 435/619 (70%), Gaps = 0/619 (0%) Strand=Plus/Plus Query 123293 ACTGTTGCACCATGAATGGCACATAGTAATGCTCCACCTAGTATTCCTGCAACACCCATC 123352 || ||||| |||||||| ||||| |||| || | || |||| || || ||||||||| Sbjct 146927 ACAGTTGCGCCATGAATTGCACAAAGTAGAGCAGCTCCAAGTACACCCGCTACACCCATC 146986 Query 123353 ATGTGAAATGGATTCAATGTAATGTTGTGGAAACCTTGTATGAATAAGATATAACGAAAG 123412 || || || || || || || ||| ||||||||||| | |||||| || | || || Sbjct 146987 ATATGGAAAGGGTTTAAAGTCCAGTTATGGAAACCTTGGAAGAATAAAATGAATCGGAAA 147046 Query 123413 ATTGCTGCGACACCGAATGATGGTGCGAAGAACCAACTGTGCTGACCTAGTGGATAGATC 123472 ||||| || ||||| || |||||| |||||||||| || |||| || || || Sbjct 147047 ATTGCAGCAACACCAAAGCTTGGTGCAAAGAACCAACCAGATTGTCCTAAAGGGTAAATT 147106 Query 123473 AGAAAGATGCTAGTGAAGACTGCGATAACAGCAGAGAATGCGAGTGCGTTGTAAGGTCTA 123532 | || | | ||| || | || || || ||||| | |||||||||||| | | Sbjct 147107 AAGAATACAGAAACGAATACAGAAATTGGTGCTGAAAATGCAATTGCGTTGTAAGGGCGA 147166 Query 123533 ATGCCTACAAGTCCTGCGATCTCAAATTGTCTGAGCATGAAACCTATGAGTCCAAAGACT 123592 || ||| | ||| || ||||| || | ||||| ||||| || || |||| | Sbjct 147167 ATCTTTACTGAACGTGCAATTTCAAACTGACGAAGCATAAAACCAATCAGAGCAAATGCA 147226 Query 123593 CCATGTAATGCTACAAAGTTCCATAGACCTCCGAGTTGTAACCAACGAACGAATGATCCT 123652 || || | || ||||| |||||||||| || ||||| ||||||| ||| ||| Sbjct 147227 CCGTGAAGAGCAACAAACGTCCATAGACCACCAAGTTGACACCAACGTGTGAAATCGCCT 147286 Query 123653 TGTGCTTCAGGTCCCCAAAGGAACATGAGACTATGACCCATTGCGTCACCAGGTGTGGAG 123712 || ||||| || ||||||||||| | | | ||||||||| | | || || || Sbjct 147287 TGAGCTTCTGGGCCCCAAAGGAATAATAAAGAATGACCCATACTATTCGCTGGAGTTGAA 147346 Query 123713 ACTGCTGCTGTTAAGAAGTTTGCTCCCTCAAGATATGAAGATGCAATACCATGTGTATAC 123772 || |||||||||||||| || ||| || | |||||||||||| | |||||| |||||| Sbjct 147347 ACAGCTGCTGTTAAGAAATTACATCCTTCTAAATATGAAGATGCTAAACCATGAGTATAC 147406 Query 123773 CATGATGTAACGAAGGTAGTTCCTAAGAACCAACCACCGATTGATAGATACGCACAAGGC 123832 || || || || || ||||||||| ||||||||||| | || || || || |||| Sbjct 147407 CAAGACGTTACAAATGTAGTTCCTGTAAACCAACCACCAAGTGCCAGGTATGCTGTAGGC 147466 Query 123833 AGAAGTAAAAGACCAGACCATCCTATGAATACAAAACGATCTCTCTTTAACCAGTCGTCA 123892 | | ||| | || |||||||||| || || ||||| || | | |||||| || Sbjct 147467 AATAATAATAACCCTGACCATCCTAGAAAGACGAAACGGTCACGACGAAGCCAGTCATCT 147526 Query 123893 AGAACATCAAACCAACCTC 123911 | |||||||||||||||| Sbjct 147527 ACTACATCAAACCAACCTC 147545 Score = 165 bits (182), Expect = 9e-36 Identities = 220/306 (72%), Gaps = 0/306 (0%) Strand=Plus/Plus Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925 |||||| ||||| || | |||||| || || || |||||||||| || ||||| || || Sbjct 16031 TTAAAGAGCGTTTCCACGTGGTAAAACCTCCTCAGGGAATACAAGTTTTTCATGAGGCTG 16090 Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985 || || | |||||| || | || ||||| || | |||||| || || |||||||| Sbjct 16091 ATCTTGAGCAGCCATCCAAGCACGAATACCTTCGTTTAAAAGAATATTTTTTGTATAGAA 16150 Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045 ||| || || || || ||||| || || | || ||||| || || || || || || | Sbjct 16151 AGTTTCAAATTCAGGATCTTCCGCAGCGCGAATTTCTTGTGAAACGAAATCATACGCACG 16210 Query 123046 GAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAAC 123105 | ||| | |||| |||||| | ||| || | |||| | ||| | || ||||| Sbjct 16211 TAAGTTTAAAGCTAAACCTACTACACCAATTGCACTCATCCAAAGACCAGTTACCGGAAC 16270 Query 123106 GAACAACATAAGGAAGTGTAAGAATCTTTTGTTAGAAAATGCGATACCAAATATCTGTGA 123165 || ||||||| ||||||||| | | ||| || ||||| || | |||||| || ||||| Sbjct 16271 AAATAACATAAAGAAGTGTAACCAACGTTTATTTGAAAAAGCTACACCAAAAATTTGTGA 16330 Query 123166 CCAGAA 123171 |||||| Sbjct 16331 CCAGAA 16336 Score = 165 bits (182), Expect = 9e-36 Identities = 220/306 (72%), Gaps = 0/306 (0%) Strand=Plus/Plus Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925 |||||| ||||| || | |||||| || || || |||||||||| || ||||| || || Sbjct 145476 TTAAAGAGCGTTTCCACGTGGTAAAACCTCCTCAGGGAATACAAGTTTTTCATGAGGCTG 145535 Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985 || || | |||||| || | || ||||| || | |||||| || || |||||||| Sbjct 145536 ATCTTGAGCAGCCATCCAAGCACGAATACCTTCGTTTAAAAGAATATTTTTTGTATAGAA 145595 Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045 ||| || || || || ||||| || || | || ||||| || || || || || || | Sbjct 145596 AGTTTCAAATTCAGGATCTTCCGCAGCGCGAATTTCTTGTGAAACGAAATCATACGCACG 145655 Query 123046 GAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAAC 123105 | ||| | |||| |||||| | ||| || | |||| | ||| | || ||||| Sbjct 145656 TAAGTTTAAAGCTAAACCTACTACACCAATTGCACTCATCCAAAGACCAGTTACCGGAAC 145715 Query 123106 GAACAACATAAGGAAGTGTAAGAATCTTTTGTTAGAAAATGCGATACCAAATATCTGTGA 123165 || ||||||| ||||||||| | | ||| || ||||| || | |||||| || ||||| Sbjct 145716 AAATAACATAAAGAAGTGTAACCAACGTTTATTTGAAAAAGCTACACCAAAAATTTGTGA 145775 Query 123166 CCAGAA 123171 |||||| Sbjct 145776 CCAGAA 145781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578996221518520