Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq52 812 0.0 >seq52 Length=149364 Score = 812 bits (900), Expect = 0.0 Identities = 778/994 (78%), Gaps = 2/994 (0%) Strand=Plus/Plus Query 26725 TCAGCAGCAGCAAGATCCAATGGAAAATTATGGGCGTTCCTTTCGTGAATCACCTCTAAT 26784 ||| || |||| | ||| ||||| || || || ||||| | || || || || || | Sbjct 85198 TCAACAACAGCTAAATCTAATGGGAAGTTGTGAGCGTTACGCTCATGCATTACTTCCATA 85257 Query 26785 CCAAGACCAGCACGGTTGAGAACGTCTGCCCAAGTGTTGAGCACACGACCCTGTGAATCA 26844 ||||| |||||||||| || ||||||||||||||||| |||||||| |||||||| Sbjct 85258 CCAAGGTTGGCACGGTTGATAATGTCTGCCCAAGTGTTGATTACACGACCTTGTGAATCT 85317 Query 26845 ATCACAGACTGATTGAAGTTGAAACCGTTGAGATTGAAAGCCATCGTGGATACACCAAGT 26904 | || || || |||||||||||||| || | ||||| ||||| || || | ||| | Sbjct 85318 ACAACTGATTGGTTGAAGTTGAAACCATTTAAGTTGAATGCCATAGTTGAAATACCTAAA 85377 Query 26905 GCGGTGAACCAGATGCCAACAACGGGCCATGCAGCAAGGAAGAAGTGCAAGGAACGTGAG 26964 || |||||||| || |||||||| ||||| ||||| | |||||| || || ||||| ||| Sbjct 85378 GCAGTGAACCAAATACCAACAACTGGCCAAGCAGCTAAGAAGAAATGTAATGAACGAGAG 85437 Query 26965 TTGTTGAATGAAGCATATTGGAAGATCAAACGACCGAAGTAGCCATGTGCTGCGACGATG 27024 |||||||| |||||||||||||| || |||||||||||||||||||| ||||| |||||| Sbjct 85438 TTGTTGAAAGAAGCATATTGGAAAATTAAACGACCGAAGTAGCCATGAGCTGCAACGATG 85497 Query 27025 TTGTAGGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGTGACTCAGTTTCAGTC 27084 ||||| || ||||||||||||||||| || ||||| | ||| ||| || ||||||| Sbjct 85498 TTGTAAGTTTCTTCTTCTTGACCGAATTTGTAACCTTCGTTAGCTGATTCGTTTTCAGTT 85557 Query 27085 GTCTCACGGACGAGTGAAGATGTAACCAGACTTCCGTGCATAGCAGAGAAAAGAGATCCA 27144 || ||||| | | ||||| || || || ||||||||||||||||| | || ||| Sbjct 85558 GTTTCACGAATTAAAGAAGAAGTTACAAGTGAACCGTGCATAGCAGAGAATAATGAACCA 85617 Query 27145 CCGAATACCCCAGCAACACCGAGCATGTGGAACGGGTGCATAAGGATATTGTGTTCTGCC 27204 || ||||| ||||||||||| ||||| ||||| |||||||||||||| ||||| || || Sbjct 85618 CCAAATACACCAGCAACACCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCAGCT 85677 Query 27205 TGGAATACAAGCATGTAGTTAAAAGTACCAGAGATACCAAGAGGCATAGCATCGGAGAAA 27264 |||||||| | |||| |||| ||||||||||||||||| | ||||||| |||| |||||| Sbjct 85678 TGGAATACGATCATGAAGTTGAAAGTACCAGAGATACCTAAAGGCATACCATCAGAGAAA 85737 Query 27265 GAACCTTGACCGAAAGGATAGACGAGGAATACTGCACTCGCAGCAGCGACTGGAGCAGAA 27324 ||||||||||||| ||||| | || |||||| || | || ||||| ||||| || || Sbjct 85738 GAACCTTGACCGATTGGATAAATGATGAATACAGCTGTAGCTGCAGCAACTGGTGCTGAG 85797 Query 27325 TATGCTACACAGATCCATGGACGCATACCTAAACGATATGAGAGTTCCCACTCACGTCCC 27384 || || || |||||| |||||||||||||||||| | || | |||||||||||| ||| Sbjct 85798 TAAGCAACTGCGATCCAAGGACGCATACCTAAACGAAAAGATAATTCCCACTCACGACCC 85857 Query 27385 ATATAAGCATAGATGCCGATAAGGAAGTGGAAGACTACCAGTTGGAAAGGACCACCGTTA 27444 || || | | | | ||| | | ||| ||| | || | |||||| |||||||||| || Sbjct 85858 ATGTATGAACAAACGCCTAAGAAGAAATGGCAAACGATAAGTTGGTAAGGACCACCATTG 85917 Query 27445 TACAACCACTCATCGAGTGATGCTGCTTCCCAGATTGGGTAGAAGTGGAGACCGATTGCA 27504 || ||||||||||| || || ||||||||||| |||||||||||||| | |||||| || Sbjct 85918 TATAACCACTCATCAAGAGAAGCTGCTTCCCAAATTGGGTAGAAGTGTAAACCGATAGCG 85977 Query 27505 TTTGAACTTGGGACAACTGCACCAGAAATGATGTTGTTGCCATACATAAGTGAACCAGCA 27564 || ||| |||| | || ||||||| ||||| ||||| ||||| | | |||||| | | Sbjct 85978 TTAGAAGTTGGAATAATAGCACCAGTGATGATATTGTTTCCATATAGTAATGAACCTGAA 86037 Query 27565 ACGGGTTCACGAATACCGTCAATATCGACGGGTGGTGCTGCGATGAATGCGACAATGAA- 27623 || || ||||| ||||| || |||||||| || || |||||||| ||||||| || || Sbjct 86038 ACAGGCTCACGGATACCATCGATATCGACAGGCGGAGCTGCGATAAATGCGATGATAAAT 86097 Query 27624 GCAGACAGTTGCTGCTAACAGTGTTGGGATCATCAGTACACCGAACCAACCAACATACAA 27683 | || ||| |||| ||| | || |||||||| | ||||| |||||||| | || || Sbjct 86098 ACTGA-AGTAGCTGTTAATAAAGTAGGGATCATTAACACACCAAACCAACCGATGTATAA 86156 Query 27684 ACGGTTGTTAGTTGATGTCACCCACTCACAGAAA 27717 |||||| | ||| || ||||||||||| ||| Sbjct 86157 ACGGTTTTCAGTGCTAGTTACCCACTCACAAAAA 86190 Score = 389 bits (430), Expect = 5e-103 Identities = 514/708 (73%), Gaps = 4/708 (1%) Strand=Plus/Plus Query 23704 TAACCATCGAATAGGTCTCCTCCTCCTGAGTGGAATCGAACGCTTTAAAAGTGTTTGCCT 23763 ||||||| || || || || || | ||||| | | || || || |||||||| Sbjct 17393 TAACCATTGAGTATGTTTCTTCAGCTTGAGTTGGGTTAAAAGCACGGAATGTGTTTGCAC 17452 Query 23764 GTTCTCCATCTTCATACAGTGTATTCTCGACAGTAACTCCATGAATAGCAGAGAGAAGTG 23823 || ||||| ||| | || ||||| || ||||| | |||||||| ||| | || || | Sbjct 17453 CATCACCATCCTCAAAAAGCGTATTTTCTACAGTTGCGCCATGAATTGCACAAAGTAGAG 17512 Query 23824 CTCCTCCCAGTATACCAGCAACTCCCATCATATGGAAGGGGTTGAGCGTCCAGTTATGAA 23883 | |||| |||| ||| || || |||||||||||||| ||||| | ||||||||||| | Sbjct 17513 CAGCTCCAAGTACACCCGCTACACCCATCATATGGAAAGGGTTTAAAGTCCAGTTATGGA 17572 Query 23884 AGCCCTGGAGGAAGAGAAGGAACCTGAAAATCGCCGCAACACCGAAACTCGGCGCAAAGA 23943 | || |||| ||| | || ||| | |||||| || |||||||| || || || ||||||| Sbjct 17573 AACCTTGGAAGAATAAAATGAATCGGAAAATTGCAGCAACACCAAAGCTTGGTGCAAAGA 17632 Query 23944 ACCAAGATGACTGTCCCAAAGGATAGATGAGGAATACAGACACGAATACAGCAATAGGAC 24003 ||||| || ||||| ||||| || || | ||||||||| |||||||||| ||| || Sbjct 17633 ACCAACCAGATTGTCCTAAAGGGTAAATTAAGAATACAGAAACGAATACAGAAATTGGTG 17692 Query 24004 CAGAAAAAGCAATCGCATTGTAGGGACGGATTCCAATTAGACGTGCCAGTTCAAACTGAC 24063 | ||||| ||||| || ||||| || || || | | |||||| | ||||||||||| Sbjct 17693 CTGAAAATGCAATTGCGTTGTAAGGGCGAATCTTTACTGAACGTGCAATTTCAAACTGAC 17752 Query 24064 GTAACATAAAACCTATAAGTGCAAAGGCACCGTGGAGAGCAACAAAGGACCAAAGCCCTC 24123 | | ||||||||| || || ||||| |||||||| ||||||||||| | ||| || || | Sbjct 17753 GAAGCATAAAACCAATCAGAGCAAATGCACCGTGAAGAGCAACAAACGTCCATAGACCAC 17812 Query 24124 CAAGTTGGAGCCACCGT-TGAAAGTCCCCTTGAGACTCAGGACCCCAAAGTAGAAGAAGA 24182 ||||||| ||| ||| ||||| || ||||||| || || |||||||| | | | | Sbjct 17813 CAAGTTGACACCAACGTGTGAAA-TCGCCTTGAGCTTCTGGGCCCCAAAGGAATAATAAA 17871 Query 24183 GAATGACCCATAGCGTCAGCAGGCGTCGAGACAGCTGCCG-TAAGAAAGTTAGCACCCTC 24241 |||||||||||| | || || || || |||||||| | ||||||| ||| || || Sbjct 17872 GAATGACCCATACTATTCGCTGGAGTTGAAACAGCTGCTGTTAAGAAA-TTACATCCTTC 17930 Query 24242 AAGATAGGAACTAGCAAGTCCATGGGTGTACCAACTCGTAACAAAAGCTGTGCCAGTAAG 24301 | ||| ||| || | ||||| || |||||| ||| ||||| | || || |||| Sbjct 17931 TAAATATGAAGATGCTAAACCATGAGTATACCAAGACGTTACAAATGTAGTTCCTGTAAA 17990 Query 24302 CCAACCGCCAATGGCAAGATAAGCAGTGGGAAGAAGTAGGAGTCCAGACCAACCCACAAA 24361 |||||| |||| || || || || || || | | || | || ||||| || | ||| Sbjct 17991 CCAACCACCAAGTGCCAGGTATGCTGTAGGCAATAATAATAACCCTGACCATCCTAGAAA 18050 Query 24362 GACAAAGCGATCCCGTTTAACCCAGTCGTCCAAGATGTCAAACCATCC 24409 ||| || || || || || |||||| || | | |||||||| || Sbjct 18051 GACGAAACGGTCACGACGAAGCCAGTCATCTACTACATCAAACCAACC 18098 Score = 389 bits (430), Expect = 5e-103 Identities = 514/708 (73%), Gaps = 4/708 (1%) Strand=Plus/Plus Query 23704 TAACCATCGAATAGGTCTCCTCCTCCTGAGTGGAATCGAACGCTTTAAAAGTGTTTGCCT 23763 ||||||| || || || || || | ||||| | | || || || |||||||| Sbjct 146838 TAACCATTGAGTATGTTTCTTCAGCTTGAGTTGGGTTAAAAGCACGGAATGTGTTTGCAC 146897 Query 23764 GTTCTCCATCTTCATACAGTGTATTCTCGACAGTAACTCCATGAATAGCAGAGAGAAGTG 23823 || ||||| ||| | || ||||| || ||||| | |||||||| ||| | || || | Sbjct 146898 CATCACCATCCTCAAAAAGCGTATTTTCTACAGTTGCGCCATGAATTGCACAAAGTAGAG 146957 Query 23824 CTCCTCCCAGTATACCAGCAACTCCCATCATATGGAAGGGGTTGAGCGTCCAGTTATGAA 23883 | |||| |||| ||| || || |||||||||||||| ||||| | ||||||||||| | Sbjct 146958 CAGCTCCAAGTACACCCGCTACACCCATCATATGGAAAGGGTTTAAAGTCCAGTTATGGA 147017 Query 23884 AGCCCTGGAGGAAGAGAAGGAACCTGAAAATCGCCGCAACACCGAAACTCGGCGCAAAGA 23943 | || |||| ||| | || ||| | |||||| || |||||||| || || || ||||||| Sbjct 147018 AACCTTGGAAGAATAAAATGAATCGGAAAATTGCAGCAACACCAAAGCTTGGTGCAAAGA 147077 Query 23944 ACCAAGATGACTGTCCCAAAGGATAGATGAGGAATACAGACACGAATACAGCAATAGGAC 24003 ||||| || ||||| ||||| || || | ||||||||| |||||||||| ||| || Sbjct 147078 ACCAACCAGATTGTCCTAAAGGGTAAATTAAGAATACAGAAACGAATACAGAAATTGGTG 147137 Query 24004 CAGAAAAAGCAATCGCATTGTAGGGACGGATTCCAATTAGACGTGCCAGTTCAAACTGAC 24063 | ||||| ||||| || ||||| || || || | | |||||| | ||||||||||| Sbjct 147138 CTGAAAATGCAATTGCGTTGTAAGGGCGAATCTTTACTGAACGTGCAATTTCAAACTGAC 147197 Query 24064 GTAACATAAAACCTATAAGTGCAAAGGCACCGTGGAGAGCAACAAAGGACCAAAGCCCTC 24123 | | ||||||||| || || ||||| |||||||| ||||||||||| | ||| || || | Sbjct 147198 GAAGCATAAAACCAATCAGAGCAAATGCACCGTGAAGAGCAACAAACGTCCATAGACCAC 147257 Query 24124 CAAGTTGGAGCCACCGT-TGAAAGTCCCCTTGAGACTCAGGACCCCAAAGTAGAAGAAGA 24182 ||||||| ||| ||| ||||| || ||||||| || || |||||||| | | | | Sbjct 147258 CAAGTTGACACCAACGTGTGAAA-TCGCCTTGAGCTTCTGGGCCCCAAAGGAATAATAAA 147316 Query 24183 GAATGACCCATAGCGTCAGCAGGCGTCGAGACAGCTGCCG-TAAGAAAGTTAGCACCCTC 24241 |||||||||||| | || || || || |||||||| | ||||||| ||| || || Sbjct 147317 GAATGACCCATACTATTCGCTGGAGTTGAAACAGCTGCTGTTAAGAAA-TTACATCCTTC 147375 Query 24242 AAGATAGGAACTAGCAAGTCCATGGGTGTACCAACTCGTAACAAAAGCTGTGCCAGTAAG 24301 | ||| ||| || | ||||| || |||||| ||| ||||| | || || |||| Sbjct 147376 TAAATATGAAGATGCTAAACCATGAGTATACCAAGACGTTACAAATGTAGTTCCTGTAAA 147435 Query 24302 CCAACCGCCAATGGCAAGATAAGCAGTGGGAAGAAGTAGGAGTCCAGACCAACCCACAAA 24361 |||||| |||| || || || || || || | | || | || ||||| || | ||| Sbjct 147436 CCAACCACCAAGTGCCAGGTATGCTGTAGGCAATAATAATAACCCTGACCATCCTAGAAA 147495 Query 24362 GACAAAGCGATCCCGTTTAACCCAGTCGTCCAAGATGTCAAACCATCC 24409 ||| || || || || || |||||| || | | |||||||| || Sbjct 147496 GACGAAACGGTCACGACGAAGCCAGTCATCTACTACATCAAACCAACC 147543 Score = 154 bits (170), Expect = 2e-32 Identities = 184/247 (74%), Gaps = 2/247 (1%) Strand=Plus/Plus Query 23459 CATCCATTCACGGAGGCCATTGTTCAACAAAATATTTTTCGTGTAGAAGGTCTCATACGA 23518 |||||| |||| | || | ||| || | ||||||||| || ||||| || ||| | Sbjct 16103 CATCCAAGCACGAATACCTTCGTTTAAAAGAATATTTTTTGTATAGAAAGTTTCAAATTC 16162 Query 23519 ACCATCTTCAGCAGCACGAATCTCTTGACTCACAAAATCATAAGCACG-AAGATTAAGAG 23577 | |||||| ||||| ||||| ||||| || |||||||| ||||| ||| |||| || Sbjct 16163 AGGATCTTCCGCAGCGCGAATTTCTTGTGAAACGAAATCATACGCACGTAAGTTTAA-AG 16221 Query 23578 CAAGCCCAATGATGCCAATAGAAGAGACCCAAAGACCCATGACAGGAACAAACAACATAA 23637 | | || | | ||||| | | | ||||||||| | || |||||||| ||||||| Sbjct 16222 CTAAACCTACTACACCAATTGCACTCATCCAAAGACCAGTTACCGGAACAAATAACATAA 16281 Query 23638 AGAAGTGCAACCAACGCTTATTGCTAAACGCAACCCCGAAGATTTGTGACCAAAAACGAT 23697 ||||||| |||||||| ||||| ||| || || || || ||||||||||| ||||||| Sbjct 16282 AGAAGTGTAACCAACGTTTATTTGAAAAAGCTACACCAAAAATTTGTGACCAGAAACGAT 16341 Query 23698 TTGCTGT 23704 |||| || Sbjct 16342 TTGCAGT 16348 Score = 154 bits (170), Expect = 2e-32 Identities = 184/247 (74%), Gaps = 2/247 (1%) Strand=Plus/Plus Query 23459 CATCCATTCACGGAGGCCATTGTTCAACAAAATATTTTTCGTGTAGAAGGTCTCATACGA 23518 |||||| |||| | || | ||| || | ||||||||| || ||||| || ||| | Sbjct 145548 CATCCAAGCACGAATACCTTCGTTTAAAAGAATATTTTTTGTATAGAAAGTTTCAAATTC 145607 Query 23519 ACCATCTTCAGCAGCACGAATCTCTTGACTCACAAAATCATAAGCACG-AAGATTAAGAG 23577 | |||||| ||||| ||||| ||||| || |||||||| ||||| ||| |||| || Sbjct 145608 AGGATCTTCCGCAGCGCGAATTTCTTGTGAAACGAAATCATACGCACGTAAGTTTAA-AG 145666 Query 23578 CAAGCCCAATGATGCCAATAGAAGAGACCCAAAGACCCATGACAGGAACAAACAACATAA 23637 | | || | | ||||| | | | ||||||||| | || |||||||| ||||||| Sbjct 145667 CTAAACCTACTACACCAATTGCACTCATCCAAAGACCAGTTACCGGAACAAATAACATAA 145726 Query 23638 AGAAGTGCAACCAACGCTTATTGCTAAACGCAACCCCGAAGATTTGTGACCAAAAACGAT 23697 ||||||| |||||||| ||||| ||| || || || || ||||||||||| ||||||| Sbjct 145727 AGAAGTGTAACCAACGTTTATTTGAAAAAGCTACACCAAAAATTTGTGACCAGAAACGAT 145786 Query 23698 TTGCTGT 23704 |||| || Sbjct 145787 TTGCAGT 145793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665491896077320