Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_020865.1 Length=45730 Score E Sequences producing significant alignments: (Bits) Value seq52 600 4e-167 >seq52 Length=149364 Score = 600 bits (664), Expect = 4e-167 Identities = 662/879 (75%), Gaps = 2/879 (0%) Strand=Plus/Minus Query 41327 TTTATTATCGCCTTTGTTGGCGCACCACCTGTTGACATCGATGGAATCCGAGAACCCGTC 41386 ||||| ||||| ||| | | || || ||||| || |||||||| ||||| || || || Sbjct 86096 TTTATCATCGCATTTATCGCAGCTCCGCCTGTCGATATCGATGGTATCCGTGAGCCTGTT 86037 Query 41387 GCTGGCTCCCTGTTGTATGGTAACAACATCATATCAGGAGCCGTCGTTCCGAGCAGTAAT 41446 | || || | | ||||| ||||| ||||| | || || | |||| | ||| Sbjct 86036 TCAGGTTCATTACTATATGGAAACAATATCATCACTGGTGCTATTATTCCAACTTCTAAC 85977 Query 41447 GCCATCGGACTACACTTCTACCCAATTTGGGAAGCTGCTACACTTGATGAATGGCTGTAC 41506 || ||||| ||||||||||||||||||||||||| ||| | |||||||| ||| | ||| Sbjct 85976 GCTATCGGTTTACACTTCTACCCAATTTGGGAAGCAGCTTCTCTTGATGAGTGGTTATAC 85917 Query 41507 AACGGCGGTCCATTCCAACTCACCGTATTCCACTTCCTCATTGGCGTCTTTGCTTACATG 41566 || || ||||| | |||||| | ||| | ||| ||| || | ||||| | | | |||||| Sbjct 85916 AATGGTGGTCCTTACCAACTTATCGTTTGCCATTTCTTCTTAGGCGTTTGTTCATACATG 85857 Query 41567 GGACGAGAGTGGGAACTTAGCTAT-CGACTAGGGATGAGGCCCTGGATCTTTGTTGCGTA 41625 || || ||||||||| ||| || | || |||| ||| | || |||||| ||||| || Sbjct 85856 GGTCGTGAGTGGGAA-TTATCTTTTCGTTTAGGTATGCGTCCTTGGATCGCAGTTGCTTA 85798 Query 41626 CTCTGCTCCTGTCGCCGCTGCGACTGCTGTGTTCCTTGTTTATCCGTTTGGACAGGGCTC 41685 ||| || || || || || || || ||||| ||| | ||||||| | || || || || Sbjct 85797 CTCAGCACCAGTTGCTGCAGCTACAGCTGTATTCATCATTTATCCAATCGGTCAAGGTTC 85738 Query 41686 TTTTTCTGATGCTATGCCCTTGGGGATATCCGGCACCTTCAACTACATGCTGGTGTTCCA 41745 ||| ||||||| |||||| || || || || || || ||||||| |||| | || ||||| Sbjct 85737 TTTCTCTGATGGTATGCCTTTAGGTATCTCTGGTACTTTCAACTTCATGATCGTATTCCA 85678 Query 41746 GGCTGAGCACAATATTCTTATGCATCCTTTTCACATGCTGGGTGTGGCCGGCGTATTTGG 41805 ||||||||||| || |||||||| || || || ||||| ||||| || || |||||||| Sbjct 85677 AGCTGAGCACAACATCCTTATGCACCCATTCCATATGCTTGGTGTTGCTGGTGTATTTGG 85618 Query 41806 TGGGAGTTTGTTCTCTGCTATGCACGGTAGCCTGGTCACGTCGTCACTCATTCGTGAGAC 41865 ||| || |||||||||||||||||| || || || || || | |||||||| || Sbjct 85617 TGGTTCATTATTCTCTGCTATGCACGGTTCACTTGTAACTTCTTCTTTAATTCGTGAAAC 85558 Query 41866 GACTGAAGAGGTTTCACAGAACTATGGTTACAAGTTTGGTCAAGAGGAAGAGACTTACAA 41925 |||||| | | ||| ||| | |||||||| || |||||||| ||||| |||||||| Sbjct 85557 AACTGAAAACGAATCAGCTAACGAAGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAA 85498 Query 41926 TATTGTTGCTGCTCACGGCTATTTTGGTCGGCTTATCTTCCAATATGCTAGCTTTAATAA 41985 || ||||| ||||| ||||| || ||||| | || |||||||||||| || || || Sbjct 85497 CATCGTTGCAGCTCATGGCTACTTCGGTCGTTTAATTTTCCAATATGCTTCTTTCAACAA 85438 Query 41986 TTCCCGTAGTCTTCATTTCTTTCTTGCTGCCTGGCCTGTTGTAGGTATTTGGTTTGCTGC 42045 || ||| | |||||||| | ||||| ||||| ||||| ||||||||||| |||| Sbjct 85437 CTCTCGTTCATTACATTTCTTCTTAGCTGCTTGGCCAGTTGTTGGTATTTGGTTCACTGC 85378 Query 42046 GCTTGGCGTGTCTACCATGGCTTTCAACTTGAATGGTTTCAACTTTAACCAATCTCTGCT 42105 | || | || || ||||| |||||||| |||||||||||||| |||||||| | | Sbjct 85377 TTTAGGTATTTCAACTATGGCATTCAACTTAAATGGTTTCAACTTCAACCAATCAGTTGT 85318 Query 42106 AGCTGCTGATGGACAGGTGATCAACACCTGGGCTGACATTCTTAACCGTGCCAACCTTGG 42165 || | | | || | || |||||||| ||||| |||||| | ||||||||||||||||| Sbjct 85317 AGATTCACAAGGTCGTGTAATCAACACTTGGGCAGACATTATCAACCGTGCCAACCTTGG 85258 Query 42166 CTTTGAGGTGATGCATGAGCGGAACGCACACAACTTCCC 42204 | || || ||||||||||| ||||| ||||||||||| Sbjct 85257 TATGGAAGTAATGCATGAGCGTAACGCTCACAACTTCCC 85219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146213877374904