Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_020867.1 Length=44892 Score E Sequences producing significant alignments: (Bits) Value seq52 596 4e-166 >seq52 Length=149364 Score = 596 bits (660), Expect = 4e-166 Identities = 725/984 (74%), Gaps = 8/984 (1%) Strand=Plus/Minus Query 42280 TGGGATCAGTTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTT 42339 |||| || |||||| | ||||| ||| ||| | |||||| | || | || |||||| Sbjct 86198 TGGGCTCGTTTTTGTGAGTGGGTAACTAGCACTGAAAACCGTTTATACATCGGTTGGTTT 86139 Query 42340 GGTGTGCTGATGATTCCCTGTCTGCTCGCTGCTACCACCTGTTTTATTGTCGCTTTCATT 42399 |||||| | ||||| || | | | | ||||| | ||||| |||| || || Sbjct 86138 GGTGTGTTAATGATCCCTACTTTATTAACAGCTACTTCAGTATTTATCATCGCATTTATC 86079 Query 42400 GCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGTAT 42459 || || || || || || || ||||| || ||||| ||||| || || || | || ||| Sbjct 86078 GCAGCTCCGCCTGTCGATATCGATGGTATCCGTGAGCCTGTTTCAGGTTCATTACTATAT 86019 Query 42460 GGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTACATTTG 42519 || ||||| |||||| ||||||| | | || | |||||| || || |||| || Sbjct 86018 GGAAACAATATCATCACTGGTGCTATTATTCCAACTTCTAACGCTATCGGTTTACACTTC 85959 Query 42520 TATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCTTATCAG 42579 || | || |||||||| | | ||||| || ||| | |||||||| || ||||| || Sbjct 85958 TACCCAATTTGGGAAGCAGCTTCTCTTGATGAGTGGTTATACAATGGTGGTCCTTACCAA 85899 Query 42580 CTCGTCGTGTTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGCGAATGGGAACTT 42639 || |||| | ||| ||| | | || | | || ||| |||| || || |||||| | Sbjct 85898 CTTATCGTTTGCCATTTCTTCTTAGGCGTTTGTTCATACATGGGTCGTGAGTGGGAATTA 85839 Query 42640 TCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCTGTGGCTGCA 42699 || | || | || ||| | || |||||| ||||||||||| || || || |||||| Sbjct 85838 TCTTTTCGTTTAGGTATGCGTCCTTGGATCGCAGTTGCTTACTCAGCACCAGTTGCTGCA 85779 Query 42700 GCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATGGAATGCCT 42759 || || || || ||| | | |||||| | || ||||||||||| || ||||| |||||| Sbjct 85778 GCTACAGCTGTATTCATCATTTATCCAATCGGTCAAGGTTCTTTCTCTGATGGTATGCCT 85719 Query 42760 CTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAACATTCTT 42819 | || || || ||||| |||||||||||| | || ||||| ||||| || ||||| ||| Sbjct 85718 TTAGGTATCTCTGGTACTTTCAACTTCATGATCGTATTCCAAGCTGAGCACAACATCCTT 85659 Query 42820 ATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCAGCT 42879 ||||| || |||||||||||||||||||| || ||||||||||| || || ||||| ||| Sbjct 85658 ATGCACCCATTCCATATGCTTGGTGTTGCTGGTGTATTTGGTGGTTCATTATTCTCTGCT 85599 Query 42880 ATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAA--AGCC 42937 ||||| ||| ||||| || |||||| | | |||||||| |||||||||||| ||| Sbjct 85598 ATGCACGGTTCACTTGTAACTTCTTCTTTAATTCGTGAAACAACTGAAAACGAATCAGCT 85539 Query 42938 AAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATG 42997 || | || ||||| ||||||||||| || || ||||| ||||| |||||||| |||| Sbjct 85538 AACG--AAGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCATG 85481 Query 42998 GTTACTTTGGACGGCTTATCTTCCAATATGCGTCGTTTAATAATAGTCGCTCTTTGCACT 43057 | ||||| || || | || ||||||||||| || || || || ||| || || || | Sbjct 85480 GCTACTTCGGTCGTTTAATTTTCCAATATGCTTCTTTCAACAACTCTCGTTCATTACATT 85421 Query 43058 TCTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACTA 43117 |||| | || |||||||| ||||| || |||||||||||| || | || | |||| Sbjct 85420 TCTTCTTAGCTGCTTGGCCAGTTGTTGGTATTTGGTTCACTGCTTTAGGTATTTCAACTA 85361 Query 43118 TGGCGTTTAACTTGAATGGTTTTAACTTTAACCAATCACTTGTTGATAATCAGAA--TCA 43175 |||| || ||||| |||||||| ||||| ||||||||| |||| ||| ||| || || Sbjct 85360 TGGCATTCAACTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGAT--TCACAAGGTCG 85303 Query 43176 TGTCATCCCTACTTGGGCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCA 43235 ||| ||| |||||||| || ||| | || |||||||||||||| | || || ||||| Sbjct 85302 TGTAATCAACACTTGGGCAGACATTATCAACCGTGCCAACCTTGGTATGGAAGTAATGCA 85243 Query 43236 CGAGCGGAATGCACATAACTTCCC 43259 ||||| || || || |||||||| Sbjct 85242 TGAGCGTAACGCTCACAACTTCCC 85219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143532286959948