Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_020875.1 Length=182801 Score E Sequences producing significant alignments: (Bits) Value seq52 753 0.0 >seq52 Length=149364 Score = 753 bits (834), Expect = 0.0 Identities = 758/985 (77%), Gaps = 0/985 (0%) Strand=Plus/Minus Query 154976 AGTGGGTAACTTCTGCTGACAACCGCATCTATGTCGGTTGGTTCGGTGTTCTTATGATCC 155035 ||||||||||| |||| ||||| | || |||||||||| ||||| | ||||||| Sbjct 86182 AGTGGGTAACTAGCACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTGTTAATGATCC 86123 Query 155036 CTTGCCTCCTCGCTGCTGCTACATGCTTCATTGTCGCCTTCATTGCTGCACCTCCTGTAG 155095 || | | | ||| || || || || |||| || || || || || ||||| | Sbjct 86122 CTACTTTATTAACAGCTACTTCAGTATTTATCATCGCATTTATCGCAGCTCCGCCTGTCG 86063 Query 155096 ACATTGATGGTATTCGTGAACCCGTCGCTGGTTCTTTAATGTATGGTAACAACATCATCT 155155 | || |||||||| ||||| || || | ||||| ||| | ||||| ||||| |||||| Sbjct 86062 ATATCGATGGTATCCGTGAGCCTGTTTCAGGTTCATTACTATATGGAAACAATATCATCA 86003 Query 155156 CTGGTGCTGTTGTCCCTAGTTCAAACGCAATTGGTCTCCACTTCTATCCTATTTGGGAAG 155215 |||||||| || | || | ||| ||||| || ||| | |||||||| || |||||||||| Sbjct 86002 CTGGTGCTATTATTCCAACTTCTAACGCTATCGGTTTACACTTCTACCCAATTTGGGAAG 85943 Query 155216 CAGCAACTCTTGATGAGTGGTTGTACAATGGTGGTCCTTTCCAACTTGTAGTCTTCCACT 155275 |||| |||||||||||||||| |||||||||||||||| ||||||| | || | ||| | Sbjct 85942 CAGCTTCTCTTGATGAGTGGTTATACAATGGTGGTCCTTACCAACTTATCGTTTGCCATT 85883 Query 155276 TCCTTATCGGAATCACAGCATACTGTGGTCGTCAGTGGGAACTTTCTTACCGTCTTGGCA 155335 || | | || | ||||| |||||| |||||||| | |||| ||| | || | Sbjct 85882 TCTTCTTAGGCGTTTGTTCATACATGGGTCGTGAGTGGGAATTATCTTTTCGTTTAGGTA 85823 Query 155336 TGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCTGCGTTCGCTGTATTCC 155395 |||||||||||||| ||||| ||||| |||||||| |||| || ||||||||| Sbjct 85822 TGCGTCCTTGGATCGCAGTTGCTTACTCAGCACCAGTTGCTGCAGCTACAGCTGTATTCA 85763 Query 155396 TTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCGATGCCTCTTGGTATCTCTGGTA 155455 | ||||||| |||||||||||||||||||||||| |||||| | ||||||||||||| Sbjct 85762 TCATTTATCCAATCGGTCAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTATCTCTGGTA 85703 Query 155456 CTTTTAACTATATGTTCGTGTTCCAAGCAGAACACAATATCCTTATGCACCCCTTCCACA 155515 |||| |||| ||| |||| |||||||| || ||||| |||||||||||||| ||||| | Sbjct 85702 CTTTCAACTTCATGATCGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTCCATA 85643 Query 155516 TGCTTGGAGTAGCAGGTGTGTTCGGTGGATCTCTTTTCTCTGCTATGCACGGTTCATTGG 155575 ||||||| || || ||||| || ||||| || | ||||||||||||||||||||| | | Sbjct 85642 TGCTTGGTGTTGCTGGTGTATTTGGTGGTTCATTATTCTCTGCTATGCACGGTTCACTTG 85583 Query 155576 TGACATCTTCACTAATCCGTGAAACTACTGAGCAAGAGTCTCAGAACTATGGTTACAAGT 155635 | || ||||| |||| |||||||| ||||| | || || ||| | |||||||| | Sbjct 85582 TAACTTCTTCTTTAATTCGTGAAACAACTGAAAACGAATCAGCTAACGAAGGTTACAAAT 85523 Query 155636 TCGGACAAGAAGAAGAAACTTATAACATTGTTGCTGCTCATGGATACTTCGGTCGTCTTA 155695 |||| ||||||||||||||||| ||||| ||||| |||||||| |||||||||||| | | Sbjct 85522 TCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCATGGCTACTTCGGTCGTTTAA 85463 Query 155696 TCTTCCAGTATGCATCCTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCTGCATGGC 155755 | ||||| ||||| || ||||||||||| | | || |||||| | ||||| |||| Sbjct 85462 TTTTCCAATATGCTTCTTTCAACAACTCTCGTTCATTACATTTCTTCTTAGCTGCTTGGC 85403 Query 155756 CTGTGGTCTGCATCTGGGCAACTGCTATGGGTGTGTCAACGATGGCATTCAACCTTAACG 155815 | || || | || ||| |||||| | ||| | ||||| |||||||||||| | || | Sbjct 85402 CAGTTGTTGGTATTTGGTTCACTGCTTTAGGTATTTCAACTATGGCATTCAACTTAAATG 85343 Query 155816 GTTTCAACTTCAACCAGTCTGTAGTAGACGCTAGTGGTAAAGTCATCCCTACATGGGCAG 155875 |||||||||||||||| || || ||||| | ||| || ||| || ||||||| Sbjct 85342 GTTTCAACTTCAACCAATCAGTTGTAGATTCACAAGGTCGTGTAATCAACACTTGGGCAG 85283 Query 155876 ACATTCTTAACCGCGCTGGTCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACT 155935 ||||| | ||||| || |||||||||||||||||||| ||||||||||||||||||| Sbjct 85282 ACATTATCAACCGTGCCAACCTTGGTATGGAAGTAATGCATGAGCGTAACGCTCACAACT 85223 Query 155936 TCCCTCTTGACCTTGCTGCTGCTGA 155960 |||| | || | |||| || ||| Sbjct 85222 TCCCATTAGATTTAGCTGTTGTTGA 85198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584832999557560