Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_020878.1 Length=44945 Score E Sequences producing significant alignments: (Bits) Value seq52 672 0.0 >seq52 Length=149364 Score = 672 bits (744), Expect = 0.0 Identities = 744/992 (75%), Gaps = 0/992 (0%) Strand=Plus/Plus Query 40524 TCAGCAGAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATA 40583 ||| || |||||| |||| || |||||||||||||||||||| ||||||||||||||| Sbjct 85198 TCAACAACAGCTAAATCTAATGGGAAGTTGTGAGCGTTACGCTCATGCATTACTTCCATA 85257 Query 40584 CCTAGACTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCT 40643 || || | | ||| | || || |||||||| || || ||| | | ||| Sbjct 85258 CCAAGGTTGGCACGGTTGATAATGTCTGCCCAAGTGTTGATTACACGACCTTGTGAATCT 85317 Query 40644 ACTACTGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATG 40703 || ||||| ||||| ||||| |||||||| | ||| || |||||||| || ||||| | Sbjct 85318 ACAACTGATTGGTTGAAGTTGAAACCATTTAAGTTGAATGCCATAGTTGAAATACCTAAA 85377 Query 40704 GAGGTAAGCCATATGCCAATAACCGGGAAAGCACCAAGAAAGAAGTGTAGCGCACGGCTA 40763 | || | ||| || |||| ||| || ||||| | | ||||| |||| | ||| Sbjct 85378 GCAGTGAACCAAATACCAACAACTGGCCAAGCAGCTAAGAAGAAATGTAATGAACGAGAG 85437 Query 40764 TTGTTGAATGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATG 40823 |||||||| ||||||||||| || |||| | ||| ||||| || || || || |||||| Sbjct 85438 TTGTTGAAAGAAGCATATTGGAAAATTAAACGACCGAAGTAGCCATGAGCTGCAACGATG 85497 Query 40824 TTATAAGTCTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTG 40883 || ||||| || |||| ||||| || || || || | ||| |||||| |||| || Sbjct 85498 TTGTAAGTTTCTTCTTCTTGACCGAATTTGTAACCTTCGTTAGCTGATTCGTTTTCAGTT 85557 Query 40884 GTCTCCCGAATGATTGAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAACAAAGCACCA 40943 || || ||||| | || ||||| ||||| ||||||||||||| || || | |||| Sbjct 85558 GTTTCACGAATTAAAGAAGAAGTTACAAGTGAACCGTGCATAGCAGAGAATAATGAACCA 85617 Query 40944 CCAAAGACGCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTCTGCT 41003 ||||| || || ||||| || |||||||||||||||||||| || |||||||| || ||| Sbjct 85618 CCAAATACACCAGCAACACCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCAGCT 85677 Query 41004 TGGAAGACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGAGAAA 41063 ||||| || | |||||||||||| || ||| ||| |||||||||||||||||||||||| Sbjct 85678 TGGAATACGATCATGAAGTTGAAAGTACCAGAGATACCTAAAGGCATACCATCAGAGAAA 85737 Query 41064 GAACCCTGACCGAATGGATAAACTAAGAATACAGCTAGAGCTGCTGACAATGGAGCTGTG 41123 ||||| ||||||| |||||||| | |||||||||| |||||| | | ||| |||| | Sbjct 85738 GAACCTTGACCGATTGGATAAATGATGAATACAGCTGTAGCTGCAGCAACTGGTGCTGAG 85797 Query 41124 TATGCCACAAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACTGTCTACCA 41183 || || || ||||| || | |||||||| | | || | |||||||| | ||| Sbjct 85798 TAAGCAACTGCGATCCAAGGACGCATACCTAAACGAAAAGATAATTCCCACTCACGACCC 85857 Query 41184 GCGTATGCTGCTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCCGTTG 41243 ||||| || |||| || || || | || || ||||| || || || || ||| Sbjct 85858 ATGTATGAACAAACGCCTAAGAAGAAATGGCAAACGATAAGTTGGTAAGGACCACCATTG 85917 Query 41244 TATAGCCACTCGTCCAGTGTGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGATTGCG 41303 |||| |||||| || || | | |||||||| ||||||||||| |||| ||||| ||| Sbjct 85918 TATAACCACTCATCAAGAGAAGCTGCTTCCCAAATTGGGTAGAAGTGTAAACCGATAGCG 85977 Query 41304 TTAGAGCTCGGAACGACAGCTCCAGATATAATATTGTTCCCGTACATTAACGAGCCGGAA 41363 ||||| | |||| | ||| |||| || |||||||| || || | ||| || || ||| Sbjct 85978 TTAGAAGTTGGAATAATAGCACCAGTGATGATATTGTTTCCATATAGTAATGAACCTGAA 86037 Query 41364 ACGGGCTCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCGATTATGAAA 41423 || |||||||| || ||||| ||||| |||||||| ||||||||||| ||||| || || Sbjct 86038 ACAGGCTCACGGATACCATCGATATCGACAGGCGGAGCTGCGATAAATGCGATGATAAAT 86097 Query 41424 CATGTGGTAGCAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAACCTACGTATAGG 41483 || ||||| |||| ||| | || ||||||| ||||||||||||||| | ||||| Sbjct 86098 ACTGAAGTAGCTGTTAATAAAGTAGGGATCATTAACACACCAAACCAACCGATGTATAAA 86157 Query 41484 CGGTTGTCGGTGCTAGTGACCCAGTTACAAAA 41515 ||||| || |||||||| ||||| | |||||| Sbjct 86158 CGGTTTTCAGTGCTAGTTACCCACTCACAAAA 86189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143701886353734