Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_021071.1 Length=177211 Score E Sequences producing significant alignments: (Bits) Value seq52 742 0.0 >seq52 Length=149364 Score = 742 bits (822), Expect = 0.0 Identities = 737/953 (77%), Gaps = 6/953 (1%) Strand=Plus/Plus Query 67353 TCAGCAGCAGCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATT 67412 ||| || |||| | || | ||||||||||||||||||||||| ||||| |||||||| Sbjct 85198 TCAACAACAGCTAAATCTAATGGGAAGTTGTGAGCGTTACGCTCATGCATTACTTCCATA 85257 Query 67413 CCAAGTCCTGCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCTGCGTCA 67472 ||||| || | ||| | |||||||||||||| || || ||| || || Sbjct 85258 CCAAGGTTGGCACGGTTGATAATGTCTGCCCAAGTGTTGATTACACGACCTTGTGAATCT 85317 Query 67473 ACGACGGATTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACACACCCATT 67532 || || |||||||||||||||||||| || | |||||||||||||||||| | ||| | Sbjct 85318 ACAACTGATTGGTTGAAGTTGAAACCATTTAAGTTGAATGCCATAGTTGAAATACCTAAA 85377 Query 67533 GCAGTGAACCAGATGCAGACCACAGGGAATGCAGCAAGGAAGAAGTGAAGACTTCTTGAG 67592 ||||||||||| || | || || || | ||||| | |||||| || | | ||| Sbjct 85378 GCAGTGAACCAAATACCAACAACTGGCCAAGCAGCTAAGAAGAAATGTAATGAACGAGAG 85437 Query 67593 TTGTTGAAAGATGCATACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGCAACAATG 67652 ||||||||||| ||||| ||||| || || ||||||||||| |||||||| ||||| ||| Sbjct 85438 TTGTTGAAAGAAGCATATTGGAAAATTAAACGACCGAAGTAGCCATGAGCTGCAACGATG 85497 Query 67653 TTGTAAGTCTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCAGTA 67712 |||||||| ||||||||||| ||||| |||||||| | ||| ||| || | ||||| Sbjct 85498 TTGTAAGTTTCTTCTTCTTGACCGAATTTGTAACCTTCGTTAGCTGATTCGTTTTCAGTT 85557 Query 67713 GTTTCTCTGATAAGAGAAGAAGTAACAAGAGAACCGTGCATAGCACTAAAGAGTGAACCA 67772 ||||| | || | ||||||||| ||||| ||||||||||||||| || | ||||||| Sbjct 85558 GTTTCACGAATTAAAGAAGAAGTTACAAGTGAACCGTGCATAGCAGAGAATAATGAACCA 85617 Query 67773 CCGAATACACCTGCTACTCCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCTGCT 67832 || |||||||| || || |||||||||||||||||||||||||||||||||||||| ||| Sbjct 85618 CCAAATACACCAGCAACACCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCAGCT 85677 Query 67833 TGGAACACGAACATGTAGTTAAAAGTACCAGAAATACCAAGAGGCATTGCGTCAGAGAAA 67892 ||||| |||| |||| |||| ||||||||||| ||||| | |||||| | ||||||||| Sbjct 85678 TGGAATACGATCATGAAGTTGAAAGTACCAGAGATACCTAAAGGCATACCATCAGAGAAA 85737 Query 67893 GAACCTTGACCGAAAGGATAGACCAAGAACACAGCGAATGCTGCAGACACTGGAGCAGAG 67952 ||||||||||||| ||||| | | ||| ||||| ||||||| ||||| || ||| Sbjct 85738 GAACCTTGACCGATTGGATAAATGATGAATACAGCTGTAGCTGCAGCAACTGGTGCTGAG 85797 Query 67953 TATGCTACACAGATCCAAGGACGCATACCAAGACGGTAAGAAAGTTCCCACTGACGACCA 68012 || || || |||||||||||||||||| | ||| |||| | |||||||| |||||| Sbjct 85798 TAAGCAACTGCGATCCAAGGACGCATACCTAAACGAAAAGATAATTCCCACTCACGACCC 85857 Query 68013 CAGTATGCTGTGATTCCGATAAGGAAGTGGAAGACTACAAGTTGGAAAGGTCCACCATTA 68072 ||||| | || | | ||| ||| | || | ||||||| |||| |||||||| Sbjct 85858 ATGTATGAACAAACGCCTAAGAAGAAATGGCAAACGATAAGTTGGTAAGGACCACCATTG 85917 Query 68073 TACAACCACTCATCTAGAGTTGCTGCTTCCCAGATAGGATAGAAGTGAAGACCGATTGCG 68132 || ||||||||||| |||| ||||||||||| || || |||||||| | |||||| ||| Sbjct 85918 TATAACCACTCATCAAGAGAAGCTGCTTCCCAAATTGGGTAGAAGTGTAAACCGATAGCG 85977 Query 68133 TTTGAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCGTACATGAGCGAACCTGCA 68192 || ||| | |||| || |||||||| ||||| ||||| || || | | ||||||| | Sbjct 85978 TTAGAAGTTGGAATAATAGCACCAGTGATGATATTGTTTCCATATAGTAATGAACCTGAA 86037 Query 68193 ACAGGTTCTCTGATACCATCGATATCAACTGGAGGTGCTGCAATGAATGCAATGATGAA- 68251 ||||| || | ||||||||||||||| || || || ||||| || ||||| ||||| || Sbjct 86038 ACAGGCTCACGGATACCATCGATATCGACAGGCGGAGCTGCGATAAATGCGATGATAAAT 86097 Query 68252 --GCAAGTTGCTGCTGCGAGCAAGCAAGGAATCATCAACACACCGAACCAACC 68302 |||| |||| | | || ||| ||||| |||||||| |||||||| Sbjct 86098 ACTGAAGTAGCTGTT---AATAAAGTAGGGATCATTAACACACCAAACCAACC 86147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566945066861160