Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_021072.1 Length=178807 Score E Sequences producing significant alignments: (Bits) Value seq52 769 0.0 >seq52 Length=149364 Score = 769 bits (852), Expect = 0.0 Identities = 772/998 (77%), Gaps = 12/998 (1%) Strand=Plus/Plus Query 67834 TCAGCAGCAGCAAGGTCGAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATA 67893 ||| || |||| | || | ||||||||||| ||||||||||||||||| ||||||||| Sbjct 85198 TCAACAACAGCTAAATCTAATGGGAAGTTGTGAGCGTTACGCTCATGCATTACTTCCATA 85257 Query 67894 CCCAAACCAGCGCGGTTGAGAACGTCTGCCCAGGTAGGCAGAACCTTACCAGAACT---- 67949 || | || ||||||| || ||||||||| || | || |||| || || Sbjct 85258 CCAAGGTTGGCACGGTTGATAATGTCTGCCCAAGT--GTTGA---TTACACGACCTTGTG 85312 Query 67950 -ATCAAGGATAGACTGGTTGAAGTTGAAACCATTCAGGTTGAATGCCATGGTGCTAACAC 68008 ||| | | || |||||||||||||||||||| | |||||||||||| || || || Sbjct 85313 AATCTACAACTGATTGGTTGAAGTTGAAACCATTTAAGTTGAATGCCATAGTTGAAATAC 85372 Query 68009 CAAGTGCAGTGAACCAGATACCAACGACAGGCCATGCAGCAAGGAAGAAGTGCAGCGAAC 68068 | | ||||||||||| |||||||| || ||||| ||||| | |||||| || | |||| Sbjct 85373 CTAAAGCAGTGAACCAAATACCAACAACTGGCCAAGCAGCTAAGAAGAAATGTAATGAAC 85432 Query 68069 GGGAGTTGTTGAACGATGCATACTGGAAGATCAGACGACCGAAGTATCCATGTGCAGCAA 68128 | ||||||||||| || ||||| ||||| || | |||||||||||| ||||| || |||| Sbjct 85433 GAGAGTTGTTGAAAGAAGCATATTGGAAAATTAAACGACCGAAGTAGCCATGAGCTGCAA 85492 Query 68129 CAATGTTGTAAGTCTCTTCTTCTTGACCGAACTTGTAACCATAGTTCTGGGACTCAGTTT 68188 | ||||||||||| ||||||||||||||||| |||||||| | ||| || || ||| Sbjct 85493 CGATGTTGTAAGTTTCTTCTTCTTGACCGAATTTGTAACCTTCGTTAGCTGATTCGTTTT 85552 Query 68189 CAGTGGTTTCACGAACCAGTGAAGAAGTAACCAGGGAACCATGCATTGCACTGAACAGAG 68248 |||| |||||||||| | |||||||| || || ||||| ||||| ||| ||| | | Sbjct 85553 CAGTTGTTTCACGAATTAAAGAAGAAGTTACAAGTGAACCGTGCATAGCAGAGAATAATG 85612 Query 68249 ATCCACCAAATACGCCAGCAACGCCGAGCATATGGAAGGGGTGCATCAGGATGTTGTGCT 68308 | ||||||||||| |||||||| || ||||||||||| |||||||| ||||||||||||| Sbjct 85613 AACCACCAAATACACCAGCAACACCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCT 85672 Query 68309 CTGCTTGGAACACCAGCATGTAGTTGAAAGTACCAGAAATGCCGAGAGGCATTGCGTCAG 68368 | |||||||| || | |||| |||||||||||||||| || || | |||||| | |||| Sbjct 85673 CAGCTTGGAATACGATCATGAAGTTGAAAGTACCAGAGATACCTAAAGGCATACCATCAG 85732 Query 68369 AGAACGAACCTTGACCGAAAGGATAGACCAGGAAGACTGCGGATGCTGCTGCAACAGGTG 68428 |||| ||||||||||||| ||||| | | ||| || || | ||||| ||||| |||| Sbjct 85733 AGAAAGAACCTTGACCGATTGGATAAATGATGAATACAGCTGTAGCTGCAGCAACTGGTG 85792 Query 68429 CAGAGTATGCAACACAGATCCAAGGACGCATACCAAGACGATAGGAAAGTTCCCATTCAC 68488 | ||||| ||||| |||||||||||||||||| | |||| | || | |||||| |||| Sbjct 85793 CTGAGTAAGCAACTGCGATCCAAGGACGCATACCTAAACGAAAAGATAATTCCCACTCAC 85852 Query 68489 GTCCCATGTATGCAAAGATACCAATCAGGAAGTGAAAGATTACGAGTTGGAAAGGACCAC 68548 | |||||||||| | | | || | | ||| || | | | |||||| ||||||||| Sbjct 85853 GACCCATGTATGAACAAACGCCTAAGAAGAAATGGCAAACGATAAGTTGGTAAGGACCAC 85912 Query 68549 CATTGTACAACCACTCATCAAGGGTTGCTGCTTCCCAAATGGGATAAAAGTGAAGACCAA 68608 ||||||| |||||||||||||| | |||||||||||||| || || ||||| | ||| | Sbjct 85913 CATTGTATAACCACTCATCAAGAGAAGCTGCTTCCCAAATTGGGTAGAAGTGTAAACCGA 85972 Query 68609 TTGCATTTGAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCATACAGAAGTGAAC 68668 | || || ||| | |||| || |||||||| ||||| ||||| ||||| || | ||||| Sbjct 85973 TAGCGTTAGAAGTTGGAATAATAGCACCAGTGATGATATTGTTTCCATATAGTAATGAAC 86032 Query 68669 CAGCAACAGGTTCACGAATACCATCGATGTCCACAGGGGGAGCAGCGATGAAGGCGACGA 68728 | | |||||| ||||| ||||||||||| || ||||| ||||| ||||| || |||| || Sbjct 86033 CTGAAACAGGCTCACGGATACCATCGATATCGACAGGCGGAGCTGCGATAAATGCGATGA 86092 Query 68729 TGAA-ACAGATGGTTGCTGCAAGCAGCGTAGGGATCATCAGGACGCCGAACCAACCAACG 68787 | || || || || |||| | | ||||||||||| | || || |||||||| | | Sbjct 86093 TAAATACTGA-AGTAGCTGTTAATAAAGTAGGGATCATTAACACACCAAACCAACCGATG 86151 Query 68788 TAAAGGCGGTTCTCTGTGGAAGTCACCCATTCGCAGAA 68825 || | ||||| || ||| ||| ||||| || || || Sbjct 86152 TATAAACGGTTTTCAGTGCTAGTTACCCACTCACAAAA 86189 Score = 407 bits (450), Expect = 2e-108 Identities = 519/712 (73%), Gaps = 2/712 (0%) Strand=Plus/Plus Query 66904 TAACCATTGAGTAAGTTTCTTCCTCTTGAGTAGAGTCGAATGCTTTGAAAGTGTTTGCTT 66963 ||||||||||||| |||||||| ||||||| | || || || ||| |||||||| Sbjct 17393 TAACCATTGAGTATGTTTCTTCAGCTTGAGTTGGGTTAAAAGCACGGAATGTGTTTGCAC 17452 Query 66964 GTTCACCATCTTCATACAGAGTATTCTCTACTGTAACACCATGAATGGCAGAAAGCAATG 67023 |||||||| ||| | || ||||| ||||| || | |||||||| ||| |||| | | Sbjct 17453 CATCACCATCCTCAAAAAGCGTATTTTCTACAGTTGCGCCATGAATTGCACAAAGTAGAG 17512 Query 67024 CACCACCCAGGATACCTGCTACACCCATCATATGAAACGGGTTCAAGGTCCAGTTATGGA 67083 || | || || | ||| ||||||||||||||||| || ||||| || ||||||||||||| Sbjct 17513 CAGCTCCAAGTACACCCGCTACACCCATCATATGGAAAGGGTTTAAAGTCCAGTTATGGA 17572 Query 67084 ATCCTTGTAGGAAGAGAAGGAATCGAAAGATTGCTGAGACCCCGAAAGATGGAGCGAAAA 67143 | ||||| | ||| | || |||||| || ||||| | || || || ||| || || | Sbjct 17573 AACCTTGGAAGAATAAAATGAATCGGAAAATTGCAGCAACACCAAAGCTTGGTGCAAAGA 17632 Query 67144 ACCAACTCGATTGACCCAGAGGGTAGATGAGAAAGACACTAACAAAAACAGCGATAGGAC 67203 |||||| ||||| || | |||||| || | || ||| ||| || |||| || || Sbjct 17633 ACCAACCAGATTGTCCTAAAGGGTAAATTAAGAATACAGAAACGAATACAGAAATTGGTG 17692 Query 67204 CAGAGAACGCAATAGCATTGTAGGGACGGATACCGA-TGAGACGTGCCAGTTCAAACTGG 67262 | || || ||||| || ||||| || || || | ||| |||||| | ||||||||| Sbjct 17693 CTGAAAATGCAATTGCGTTGTAAGGGCGAATCTTTACTGA-ACGTGCAATTTCAAACTGA 17751 Query 67263 CGAAGCATGAAACCAATTAGAGCGAAAGCCCCGTGGAGCGCCACAAAATTCCAGAGTCCT 67322 |||||||| |||||||| ||||| || || ||||| || || ||||| |||| || || Sbjct 17752 CGAAGCATAAAACCAATCAGAGCAAATGCACCGTGAAGAGCAACAAACGTCCATAGACCA 17811 Query 67323 CCAAGTTGGATCCAGCGGACGAAATCCCCCTGAGACTCAGGACCCCAAAGTAGAAGAAGA 67382 |||||||| ||| || |||||| || |||| || || |||||||| | | | | Sbjct 17812 CCAAGTTGACACCAACGTGTGAAATCGCCTTGAGCTTCTGGGCCCCAAAGGAATAATAAA 17871 Query 67383 GAATGACCCATAGCATCAGCAGGCGTTGACACAGCCGCTGTGAGAAAATTAGCACCCTCA 67442 |||||||||||| || || || ||||| ||||| ||||| | |||||| || || Sbjct 17872 GAATGACCCATACTATTCGCTGGAGTTGAAACAGCTGCTGTTAAGAAATTACATCCTTCT 17931 Query 67443 AGATAACTAGACGCGAGTCCGTGAGTGTACCAGCTTGTGACAAACGTAGTACCAGTAAGC 67502 | ||| ||| || | || ||||| ||||| || ||||| ||||| || |||| | Sbjct 17932 AAATATGAAGATGCTAAACCATGAGTATACCAAGACGTTACAAATGTAGTTCCTGTAAAC 17991 Query 67503 CAGCCACCAATTGCCATATAAGCAGTGGGAAAAAGAAGTAGTCCAGACCAACCCACAAAG 67562 || ||||||| ||||| || || || || || | | || || ||||| || | |||| Sbjct 17992 CAACCACCAAGTGCCAGGTATGCTGTAGGCAATAATAATAACCCTGACCATCCTAGAAAG 18051 Query 67563 ACAAAGCGATCTCGTTTAAGCCAGTCATCAAGGACATCGAACCACCCCCGTT 67614 || || || || || |||||||||||| | ||||| ||||| || |||| Sbjct 18052 ACGAAACGGTCACGACGAAGCCAGTCATCTACTACATCAAACCAACCTCGTT 18103 Score = 407 bits (450), Expect = 2e-108 Identities = 519/712 (73%), Gaps = 2/712 (0%) Strand=Plus/Plus Query 66904 TAACCATTGAGTAAGTTTCTTCCTCTTGAGTAGAGTCGAATGCTTTGAAAGTGTTTGCTT 66963 ||||||||||||| |||||||| ||||||| | || || || ||| |||||||| Sbjct 146838 TAACCATTGAGTATGTTTCTTCAGCTTGAGTTGGGTTAAAAGCACGGAATGTGTTTGCAC 146897 Query 66964 GTTCACCATCTTCATACAGAGTATTCTCTACTGTAACACCATGAATGGCAGAAAGCAATG 67023 |||||||| ||| | || ||||| ||||| || | |||||||| ||| |||| | | Sbjct 146898 CATCACCATCCTCAAAAAGCGTATTTTCTACAGTTGCGCCATGAATTGCACAAAGTAGAG 146957 Query 67024 CACCACCCAGGATACCTGCTACACCCATCATATGAAACGGGTTCAAGGTCCAGTTATGGA 67083 || | || || | ||| ||||||||||||||||| || ||||| || ||||||||||||| Sbjct 146958 CAGCTCCAAGTACACCCGCTACACCCATCATATGGAAAGGGTTTAAAGTCCAGTTATGGA 147017 Query 67084 ATCCTTGTAGGAAGAGAAGGAATCGAAAGATTGCTGAGACCCCGAAAGATGGAGCGAAAA 67143 | ||||| | ||| | || |||||| || ||||| | || || || ||| || || | Sbjct 147018 AACCTTGGAAGAATAAAATGAATCGGAAAATTGCAGCAACACCAAAGCTTGGTGCAAAGA 147077 Query 67144 ACCAACTCGATTGACCCAGAGGGTAGATGAGAAAGACACTAACAAAAACAGCGATAGGAC 67203 |||||| ||||| || | |||||| || | || ||| ||| || |||| || || Sbjct 147078 ACCAACCAGATTGTCCTAAAGGGTAAATTAAGAATACAGAAACGAATACAGAAATTGGTG 147137 Query 67204 CAGAGAACGCAATAGCATTGTAGGGACGGATACCGA-TGAGACGTGCCAGTTCAAACTGG 67262 | || || ||||| || ||||| || || || | ||| |||||| | ||||||||| Sbjct 147138 CTGAAAATGCAATTGCGTTGTAAGGGCGAATCTTTACTGA-ACGTGCAATTTCAAACTGA 147196 Query 67263 CGAAGCATGAAACCAATTAGAGCGAAAGCCCCGTGGAGCGCCACAAAATTCCAGAGTCCT 67322 |||||||| |||||||| ||||| || || ||||| || || ||||| |||| || || Sbjct 147197 CGAAGCATAAAACCAATCAGAGCAAATGCACCGTGAAGAGCAACAAACGTCCATAGACCA 147256 Query 67323 CCAAGTTGGATCCAGCGGACGAAATCCCCCTGAGACTCAGGACCCCAAAGTAGAAGAAGA 67382 |||||||| ||| || |||||| || |||| || || |||||||| | | | | Sbjct 147257 CCAAGTTGACACCAACGTGTGAAATCGCCTTGAGCTTCTGGGCCCCAAAGGAATAATAAA 147316 Query 67383 GAATGACCCATAGCATCAGCAGGCGTTGACACAGCCGCTGTGAGAAAATTAGCACCCTCA 67442 |||||||||||| || || || ||||| ||||| ||||| | |||||| || || Sbjct 147317 GAATGACCCATACTATTCGCTGGAGTTGAAACAGCTGCTGTTAAGAAATTACATCCTTCT 147376 Query 67443 AGATAACTAGACGCGAGTCCGTGAGTGTACCAGCTTGTGACAAACGTAGTACCAGTAAGC 67502 | ||| ||| || | || ||||| ||||| || ||||| ||||| || |||| | Sbjct 147377 AAATATGAAGATGCTAAACCATGAGTATACCAAGACGTTACAAATGTAGTTCCTGTAAAC 147436 Query 67503 CAGCCACCAATTGCCATATAAGCAGTGGGAAAAAGAAGTAGTCCAGACCAACCCACAAAG 67562 || ||||||| ||||| || || || || || | | || || ||||| || | |||| Sbjct 147437 CAACCACCAAGTGCCAGGTATGCTGTAGGCAATAATAATAACCCTGACCATCCTAGAAAG 147496 Query 67563 ACAAAGCGATCTCGTTTAAGCCAGTCATCAAGGACATCGAACCACCCCCGTT 67614 || || || || || |||||||||||| | ||||| ||||| || |||| Sbjct 147497 ACGAAACGGTCACGACGAAGCCAGTCATCTACTACATCAAACCAACCTCGTT 147548 Score = 215 bits (238), Expect = 6e-51 Identities = 239/319 (75%), Gaps = 0/319 (0%) Strand=Plus/Plus Query 66586 ATTAAAGTGCATTACCACGGGGCAGAACTTCTTCTGGGAATACAAAGTTTTCATGCGGTT 66645 ||||||| || || ||||| || | ||| || || |||||||||| |||||||| || | Sbjct 16030 ATTAAAGAGCGTTTCCACGTGGTAAAACCTCCTCAGGGAATACAAGTTTTTCATGAGGCT 16089 Query 66646 GATCGATAGGTGCCAACCATGCACGAAGACCTTCATTCAATAGAATGTTCTTTGTGTAGA 66705 |||| || |||| ||| ||||||| |||||| || || ||||| || ||||| |||| Sbjct 16090 GATCTTGAGCAGCCATCCAAGCACGAATACCTTCGTTTAAAAGAATATTTTTTGTATAGA 16149 Query 66706 ACGTCTCGAACTCTGGGTCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCAC 66765 | || || || || || ||||| || || | || ||||| || || || ||||| |||| Sbjct 16150 AAGTTTCAAATTCAGGATCTTCCGCAGCGCGAATTTCTTGTGAAACGAAATCATACGCAC 16209 Query 66766 GAAGGTTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCAAAGACCCATAACAGGAA 66825 | | ||| | ||| | ||| | | ||| || | ||| |||||||||| | || |||| Sbjct 16210 GTAAGTTTAAAGCTAAACCTACTACACCAATTGCACTCATCCAAAGACCAGTTACCGGAA 16269 Query 66826 CAAACAACATAAAGAAATGCAACCACCTCTTATTGCTAAACGCAATACCAAAGATCTGAG 66885 |||| ||||||||||| || ||||| | ||||| ||| || | |||||| || || | Sbjct 16270 CAAATAACATAAAGAAGTGTAACCAACGTTTATTTGAAAAAGCTACACCAAAAATTTGTG 16329 Query 66886 ACCAGAAGCGGTTTGCAGT 66904 ||||||| || |||||||| Sbjct 16330 ACCAGAAACGATTTGCAGT 16348 Score = 215 bits (238), Expect = 6e-51 Identities = 239/319 (75%), Gaps = 0/319 (0%) Strand=Plus/Plus Query 66586 ATTAAAGTGCATTACCACGGGGCAGAACTTCTTCTGGGAATACAAAGTTTTCATGCGGTT 66645 ||||||| || || ||||| || | ||| || || |||||||||| |||||||| || | Sbjct 145475 ATTAAAGAGCGTTTCCACGTGGTAAAACCTCCTCAGGGAATACAAGTTTTTCATGAGGCT 145534 Query 66646 GATCGATAGGTGCCAACCATGCACGAAGACCTTCATTCAATAGAATGTTCTTTGTGTAGA 66705 |||| || |||| ||| ||||||| |||||| || || ||||| || ||||| |||| Sbjct 145535 GATCTTGAGCAGCCATCCAAGCACGAATACCTTCGTTTAAAAGAATATTTTTTGTATAGA 145594 Query 66706 ACGTCTCGAACTCTGGGTCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCAC 66765 | || || || || || ||||| || || | || ||||| || || || ||||| |||| Sbjct 145595 AAGTTTCAAATTCAGGATCTTCCGCAGCGCGAATTTCTTGTGAAACGAAATCATACGCAC 145654 Query 66766 GAAGGTTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCAAAGACCCATAACAGGAA 66825 | | ||| | ||| | ||| | | ||| || | ||| |||||||||| | || |||| Sbjct 145655 GTAAGTTTAAAGCTAAACCTACTACACCAATTGCACTCATCCAAAGACCAGTTACCGGAA 145714 Query 66826 CAAACAACATAAAGAAATGCAACCACCTCTTATTGCTAAACGCAATACCAAAGATCTGAG 66885 |||| ||||||||||| || ||||| | ||||| ||| || | |||||| || || | Sbjct 145715 CAAATAACATAAAGAAGTGTAACCAACGTTTATTTGAAAAAGCTACACCAAAAATTTGTG 145774 Query 66886 ACCAGAAGCGGTTTGCAGT 66904 ||||||| || |||||||| Sbjct 145775 ACCAGAAACGATTTGCAGT 145793 Score = 109 bits (120), Expect = 6e-19 Identities = 77/87 (89%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 35511 CTCCCCAGGTAGGATTTGAACCTACGACCAATCGATTAACAGTCGATAGCTCTGCCGCTG 35570 |||||||||||||| ||||||||||||||||||| ||||||| ||| ||||| |||||| Sbjct 75087 CTCCCCAGGTAGGACTTGAACCTACGACCAATCGGTTAACAGCCGAGCGCTCTACCGCTG 75146 Query 35571 AGCTACTGAGGATTGAGT-TTTTCTTG 35596 |||||||||||||| | |||||||| Sbjct 75147 AGCTACTGAGGATTTTTTGTTTTCTTG 75173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 572052247645320