Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_021530.1 Length=171407 Score E Sequences producing significant alignments: (Bits) Value seq52 803 0.0 >seq52 Length=149364 Score = 803 bits (890), Expect = 0.0 Identities = 776/994 (78%), Gaps = 2/994 (0%) Strand=Plus/Minus Query 157579 TTTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACT 157638 ||| || |||||||||||| || | ||||| | || |||||||||| || || | Sbjct 86190 TTTTTGTGAGTGGGTAACTAGCACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTGTT 86131 Query 157639 GATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTC 157697 ||||| || ||| | || |||| || || || || ||| |||| || |||| |||| Sbjct 86130 AATGATCCCTACTTTATTAACAGCTACT-TCAGTATTTATCATCGCATTTATCGCAGCTC 86072 Query 157698 CCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACA 157757 | ||||| || ||||| || |||||||| || || | |||||| | | ||||| |||| Sbjct 86071 CGCCTGTCGATATCGATGGTATCCGTGAGCCTGTTTCAGGTTCATTACTATATGGAAACA 86012 Query 157758 ACATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCA 157817 | |||||| ||||||| || | ||| |||| ||||| || ||| | |||||||| || | Sbjct 86011 ATATCATCACTGGTGCTATTATTCCAACTTCTAACGCTATCGGTTTACACTTCTACCCAA 85952 Query 157818 TCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAG 157877 | |||||||| || || |||||||||||| | || || |||||||||| |||||| | | Sbjct 85951 TTTGGGAAGCAGCTTCTCTTGATGAGTGGTTATACAATGGTGGTCCTTACCAACTTATCG 85892 Query 157878 TATTTCACTTCCTCATTGGTATCTATGCATACATGGGACGTGAGTGGGAACTTTCATACC 157937 | | || ||| || | || | | | |||||||||| |||||||||||| | || | | Sbjct 85891 TTTGCCATTTCTTCTTAGGCGTTTGTTCATACATGGGTCGTGAGTGGGAATTATCTTTTC 85832 Query 157938 GTTTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCATCTG 157997 ||||||||||||| || |||||| || || || || || ||||| |||||||| | | Sbjct 85831 GTTTAGGTATGCGTCCTTGGATCGCAGTTGCTTACTCAGCACCAGTTGCTGCAGCTACAG 85772 Query 157998 CTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTA 158057 |||||||| || | ||||| ||||||||||||||||||| |||| ||||||| | |||| Sbjct 85771 CTGTATTCATCATTTATCCAATCGGTCAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTA 85712 Query 158058 TCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACC 158117 ||||||||||||| |||| |||| | ||||||||||| || ||||||||||||||||||| Sbjct 85711 TCTCTGGTACTTTCAACTTCATGATCGTATTCCAAGCTGAGCACAACATCCTTATGCACC 85652 Query 158118 CGTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCACG 158177 | ||||||||||| ||||||||||| ||||| ||||| || | |||||||||||||||| Sbjct 85651 CATTCCATATGCTTGGTGTTGCTGGTGTATTTGGTGGTTCATTATTCTCTGCTATGCACG 85592 Query 158178 GAAGTCTCGTTACTTCCTCACTCGTTCGTGAAACGACTGAAACAGAGTCACAGAACTACG 158237 | || || ||||| || | |||||||||| ||||||| || ||| ||| | | Sbjct 85591 GTTCACTTGTAACTTCTTCTTTAATTCGTGAAACAACTGAAAACGAATCAGCTAACGAAG 85532 Query 158238 GTTACAAGTTCGGTCAAGAGGAAGAGACCTATAACATCGTCGCAGCACATGGCTACTTCG 158297 ||||||| ||||||||||| ||||| || || |||||||| ||||| ||||||||||||| Sbjct 85531 GTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCATGGCTACTTCG 85472 Query 158298 GTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTG 158357 ||||||| || |||||||| ||||| ||||||||||| ||||| || || |||||| | | Sbjct 85471 GTCGTTTAATTTTCCAATATGCTTCTTTCAACAACTCTCGTTCATTACATTTCTTCTTAG 85412 Query 158358 CTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCA 158417 |||| ||||| ||||| || || |||||||| || | || | || || |||||||||| Sbjct 85411 CTGCTTGGCCAGTTGTTGGTATTTGGTTCACTGCTTTAGGTATTTCAACTATGGCATTCA 85352 Query 158418 ACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACA 158477 || | || ||||||||||||||||| || | | ||| || |||||||| | |||| Sbjct 85351 ACTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAAGGTCGTGTAATCAACA 85292 Query 158478 CCTGGGCAGATGTACTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACG 158537 | |||||||| | | ||||| || |||||||||||||| |||||||||||||||| Sbjct 85291 CTTGGGCAGACATTATCAACCGTGCCAACCTTGGTATGGAAGTAATGCATGAGCGTAACG 85232 Query 158538 CACACAACTTCCCACTCGACCTTGCTGCTGCTGA 158571 | |||||||||||| | || | |||| || ||| Sbjct 85231 CTCACAACTTCCCATTAGATTTAGCTGTTGTTGA 85198 Score = 354 bits (392), Expect = 9e-93 Identities = 503/705 (71%), Gaps = 2/705 (0%) Strand=Plus/Minus Query 159288 GGGTGGTTCGACATCCTCGATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGGTGG 159347 || ||||| || | | |||||||||||| || || || || || ||| | || ||| Sbjct 18098 GGTTGGTTTGATGTAGTAGATGACTGGCTTCGTCGTGACCGTTTCGTCTTTCTAGGATGG 18039 Query 159348 TCTGGACTACTACTTCTTCCCACTGCTTATCTGGCCATTGGCGGTTGGCTTACTGGCACA 159407 || || || || | | || || || || ||||| |||| |||||| |||| || || Sbjct 18038 TCAGGGTTATTATTATTGCCTACAGCATACCTGGCACTTGGTGGTTGGTTTACAGGAACT 17979 Query 159408 GCTTTTGTTACGAGTTGGTACACCCACGGTCTTGCTAGTTCCTATCTTGAGGGTGCTAAC 159467 | ||||| ||| |||||| || || ||| | || ||| ||| | || || ||| Sbjct 17978 ACATTTGTAACGTCTTGGTATACTCATGGTTTAGCATCTTCATATTTAGAAGGATGTAAT 17919 Query 159468 TTTCTCACAGCAGCTGTCTCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTT 159527 || | ||||||||||| || || || || | ||||||||||||| | | | ||| Sbjct 17918 TTCTTAACAGCAGCTGTTTCAACTCCAGCGAATAGTATGGGTCATTCTTTATTATTCCTT 17859 Query 159528 TGGGGTCCTGAGTCTCAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGATTATGGAAT 159587 ||||| || || |||| || ||||| || ||||| |||||||| || |||||| Sbjct 17858 TGGGGCCCAGAAGCTCAAGGCGATTTCACACGTTGGTGTCAACTTGGTGGTCTATGGACG 17799 Query 159588 TTTGTGGCACTCCACGGTGCCTTCGCCCTAATTGGTTTCATGCTCCGTCAGTTTGAACTG 159647 ||||| || || |||||||| || || || |||||||| ||||| |||||||||||| | Sbjct 17798 TTTGTTGCTCTTCACGGTGCATTTGCTCTGATTGGTTTTATGCTTCGTCAGTTTGAAATT 17739 Query 159648 GCACGTCTCATTGGT-ATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGT 159706 |||||| ||| | || || |||||||| || ||||| || || | || ||| |||| Sbjct 17738 GCACGT-TCAGTAAAGATTCGCCCTTACAACGCAATTGCATTTTCAGCACCAATTTCTGT 17680 Query 159707 TTTTGTCAGCGTCTTCCTCATCTACCCATTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTC 159766 || || || ||| | || ||||| || || || || ||||||| || || || Sbjct 17679 ATTCGTTTCTGTATTCTTAATTTACCCTTTAGGACAATCTGGTTGGTTCTTTGCACCAAG 17620 Query 159767 CTTTGGGGTGGCAGCAATCTTTAGATTCCTGTTGTTCCTTCAAGGATTTCACAACTGGAC 159826 |||||| || || ||||| || ||||| | || ||| | ||||| || || |||||||| Sbjct 17619 CTTTGGTGTTGCTGCAATTTTCCGATTCATTTTATTCTTCCAAGGTTTCCATAACTGGAC 17560 Query 159827 GTTAAATCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTACTCAGTGC 159886 ||||| || |||||||||||||| || || ||| |||| || | || ||||| |||| Sbjct 17559 TTTAAACCCTTTCCATATGATGGGTGTAGCGGGTGTACTTGGAGCTGCTCTACTTTGTGC 17500 Query 159887 CATCCATGGCGTTACTGTAGAGAACACACTGTATGAAGATGGAGAACAAGCAAATACCTT 159946 || ||||||| |||||||| || || || | ||| ||||| || ||||| || || Sbjct 17499 AATTCATGGCGCAACTGTAGAAAATACGCTTTTTGAGGATGGTGATGGTGCAAACACATT 17440 Query 159947 TAAGGCGTTTGATTCAACTCAAGAGGAGGAGACTTACTCTATGGT 159991 || ||| | ||||||||| || || || ||||| ||||| Sbjct 17439 CCGTGCTTTTAACCCAACTCAAGCTGAAGAAACATACTCAATGGT 17395 Score = 354 bits (392), Expect = 9e-93 Identities = 503/705 (71%), Gaps = 2/705 (0%) Strand=Plus/Minus Query 159288 GGGTGGTTCGACATCCTCGATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGGTGG 159347 || ||||| || | | |||||||||||| || || || || || ||| | || ||| Sbjct 147543 GGTTGGTTTGATGTAGTAGATGACTGGCTTCGTCGTGACCGTTTCGTCTTTCTAGGATGG 147484 Query 159348 TCTGGACTACTACTTCTTCCCACTGCTTATCTGGCCATTGGCGGTTGGCTTACTGGCACA 159407 || || || || | | || || || || ||||| |||| |||||| |||| || || Sbjct 147483 TCAGGGTTATTATTATTGCCTACAGCATACCTGGCACTTGGTGGTTGGTTTACAGGAACT 147424 Query 159408 GCTTTTGTTACGAGTTGGTACACCCACGGTCTTGCTAGTTCCTATCTTGAGGGTGCTAAC 159467 | ||||| ||| |||||| || || ||| | || ||| ||| | || || ||| Sbjct 147423 ACATTTGTAACGTCTTGGTATACTCATGGTTTAGCATCTTCATATTTAGAAGGATGTAAT 147364 Query 159468 TTTCTCACAGCAGCTGTCTCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTT 159527 || | ||||||||||| || || || || | ||||||||||||| | | | ||| Sbjct 147363 TTCTTAACAGCAGCTGTTTCAACTCCAGCGAATAGTATGGGTCATTCTTTATTATTCCTT 147304 Query 159528 TGGGGTCCTGAGTCTCAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGATTATGGAAT 159587 ||||| || || |||| || ||||| || ||||| |||||||| || |||||| Sbjct 147303 TGGGGCCCAGAAGCTCAAGGCGATTTCACACGTTGGTGTCAACTTGGTGGTCTATGGACG 147244 Query 159588 TTTGTGGCACTCCACGGTGCCTTCGCCCTAATTGGTTTCATGCTCCGTCAGTTTGAACTG 159647 ||||| || || |||||||| || || || |||||||| ||||| |||||||||||| | Sbjct 147243 TTTGTTGCTCTTCACGGTGCATTTGCTCTGATTGGTTTTATGCTTCGTCAGTTTGAAATT 147184 Query 159648 GCACGTCTCATTGGT-ATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGT 159706 |||||| ||| | || || |||||||| || ||||| || || | || ||| |||| Sbjct 147183 GCACGT-TCAGTAAAGATTCGCCCTTACAACGCAATTGCATTTTCAGCACCAATTTCTGT 147125 Query 159707 TTTTGTCAGCGTCTTCCTCATCTACCCATTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTC 159766 || || || ||| | || ||||| || || || || ||||||| || || || Sbjct 147124 ATTCGTTTCTGTATTCTTAATTTACCCTTTAGGACAATCTGGTTGGTTCTTTGCACCAAG 147065 Query 159767 CTTTGGGGTGGCAGCAATCTTTAGATTCCTGTTGTTCCTTCAAGGATTTCACAACTGGAC 159826 |||||| || || ||||| || ||||| | || ||| | ||||| || || |||||||| Sbjct 147064 CTTTGGTGTTGCTGCAATTTTCCGATTCATTTTATTCTTCCAAGGTTTCCATAACTGGAC 147005 Query 159827 GTTAAATCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTACTCAGTGC 159886 ||||| || |||||||||||||| || || ||| |||| || | || ||||| |||| Sbjct 147004 TTTAAACCCTTTCCATATGATGGGTGTAGCGGGTGTACTTGGAGCTGCTCTACTTTGTGC 146945 Query 159887 CATCCATGGCGTTACTGTAGAGAACACACTGTATGAAGATGGAGAACAAGCAAATACCTT 159946 || ||||||| |||||||| || || || | ||| ||||| || ||||| || || Sbjct 146944 AATTCATGGCGCAACTGTAGAAAATACGCTTTTTGAGGATGGTGATGGTGCAAACACATT 146885 Query 159947 TAAGGCGTTTGATTCAACTCAAGAGGAGGAGACTTACTCTATGGT 159991 || ||| | ||||||||| || || || ||||| ||||| Sbjct 146884 CCGTGCTTTTAACCCAACTCAAGCTGAAGAAACATACTCAATGGT 146840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548372336741320