Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_021536.1 Length=171797 Score E Sequences producing significant alignments: (Bits) Value seq52 782 0.0 >seq52 Length=149364 Score = 782 bits (866), Expect = 0.0 Identities = 771/994 (78%), Gaps = 4/994 (0%) Strand=Plus/Minus Query 150839 TTTTGTGACTGGGTTACCTCTACTAACAACCGTCTGTATGTCGGTTGGTTCGGTGTGCTG 150898 |||||||| ||||| || ||| | |||||| | || |||||||||| |||||| | Sbjct 86189 TTTTGTGAGTGGGTAACTAGCACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTGTTA 86130 Query 150899 ATGATTCCAACTCTGTTGGCAGCAAC--CATTTGCTTCATCGTGGCATTCATCGCTGCTC 150956 ||||| || ||| | || |||| || || | || ||| | ||||| ||||| |||| Sbjct 86129 ATGATCCCTACTTTATTAACAGCTACTTCAGTA--TTTATCATCGCATTTATCGCAGCTC 86072 Query 150957 CCCCTGTGGACATCGATGGCATCCGTGAACCCGTTGCTGGTTCTCTGATGTACGGTAACA 151016 | ||||| || |||||||| |||||||| || ||| | ||||| | | || || |||| Sbjct 86071 CGCCTGTCGATATCGATGGTATCCGTGAGCCTGTTTCAGGTTCATTACTATATGGAAACA 86012 Query 151017 ACATCATCTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATCGGTCTGCACTTCTATCCCA 151076 | |||||| |||||||| || |||| ||||||||||||||||| | |||||||| || | Sbjct 86011 ATATCATCACTGGTGCTATTATTCCAACTTCTAACGCTATCGGTTTACACTTCTACCCAA 85952 Query 151077 TCTGGGAAGCAGCCTCTCTCGATGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTG 151136 | ||||||||||| ||||| ||||| ||| | ||||| |||||||||| |||||| | | Sbjct 85951 TTTGGGAAGCAGCTTCTCTTGATGAGTGGTTATACAATGGTGGTCCTTACCAACTTATCG 85892 Query 151137 TCTTCCACTTCCTGATTGGTATCTATGCTTACATGGGTCGTGAGTGGGAACTGTCTTACC 151196 | | ||| ||| | | || | | | | ||||||||||||||||||||| | |||| | Sbjct 85891 TTTGCCATTTCTTCTTAGGCGTTTGTTCATACATGGGTCGTGAGTGGGAATTATCTTTTC 85832 Query 151197 GCTTGGGTATGCGTCCCTGGATCTGCGTTGCATACTCTGCTCCAGTTGCTGCTGCGAGTG 151256 | || ||||||||||| |||||| ||||| ||||| || ||||||||||| || | | Sbjct 85831 GTTTAGGTATGCGTCCTTGGATCGCAGTTGCTTACTCAGCACCAGTTGCTGCAGCTACAG 85772 Query 151257 CAGTGTTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCCCTGGGTA 151316 | || ||| || | ||||| |||||||||||||||||||||||| ||||| | |||| Sbjct 85771 CTGTATTCATCATTTATCCAATCGGTCAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTA 85712 Query 151317 TTTCTGGCACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTGATGCACC 151376 | ||||| || ||||||| |||| | || |||||||| ||||||||||| || ||||||| Sbjct 85711 TCTCTGGTACTTTCAACTTCATGATCGTATTCCAAGCTGAGCACAACATCCTTATGCACC 85652 Query 151377 CCTTCCATATGCTTGGTGTGGCTGGTGTCTTCGGTGGATCGCTCTTCTCGGCAATGCACG 151436 | ||||||||||||||||| |||||||| || ||||| || | ||||| || ||||||| Sbjct 85651 CATTCCATATGCTTGGTGTTGCTGGTGTATTTGGTGGTTCATTATTCTCTGCTATGCACG 85592 Query 151437 GTTCTCTGGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAACGAGTCCCAGAACTATG 151496 |||| || || |||||||| | ||||||| || || |||||||| || ||| | | Sbjct 85591 GTTCACTTGTAACTTCTTCTTTAATTCGTGAAACAACTGAAAACGAATCAGCTAACGAAG 85532 Query 151497 GTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCCGCACACGGTTACTTTG 151556 ||||||| ||||||||||||||||| || |||||||||||||| || || || ||||| | Sbjct 85531 GTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCATGGCTACTTCG 85472 Query 151557 GTCGTCTCATCTTCCAATACGCTTCCTTCAACAATTCCCGTTCGCTGCACTTCTTCCTCG 151616 ||||| | || |||||||| ||||| |||||||| || ||||| | || |||||| | | Sbjct 85471 GTCGTTTAATTTTCCAATATGCTTCTTTCAACAACTCTCGTTCATTACATTTCTTCTTAG 85412 Query 151617 CAGCATGGCCTGTTGTCGGTATCTGGTTCACTGCACTTGGTGTCAGCACCATGGCATTCA 151676 | || ||||| ||||| ||||| ||||||||||| | ||| | || |||||||||| Sbjct 85411 CTGCTTGGCCAGTTGTTGGTATTTGGTTCACTGCTTTAGGTATTTCAACTATGGCATTCA 85352 Query 151677 ACCTGAACGGTTTCAACTTCAACCAGTCCATCATGGATGGTCAGGGCAAAGTCCTGAACA 151736 || | || ||||||||||||||||| || | | ||| || || || | |||| Sbjct 85351 ACTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAAGGTCGTGTAATCAACA 85292 Query 151737 CCTGGGCAGACGTTCTGAACCGTGCAGGTCTGGGTATGGAAGTTATGCACGAGCGTAATG 151796 | ||||||||| || | |||||||| || ||||||||||| ||||| |||||||| | Sbjct 85291 CTTGGGCAGACATTATCAACCGTGCCAACCTTGGTATGGAAGTAATGCATGAGCGTAACG 85232 Query 151797 CTCACAACTTCCCTCTCGACCTTGCTGCTGCTGA 151830 ||||||||||||| | || | |||| || ||| Sbjct 85231 CTCACAACTTCCCATTAGATTTAGCTGTTGTTGA 85198 Score = 369 bits (408), Expect = 4e-97 Identities = 512/709 (72%), Gaps = 6/709 (1%) Strand=Plus/Minus Query 152353 GGGTGGTTTGATGTCCTGGATGACTGGCTTAAGAGAGACCGTTTCGTTTTTGTTGGTTGG 152412 || ||||||||||| | |||||||||||| | ||||||||||| ||| | || ||| Sbjct 18098 GGTTGGTTTGATGTAGTAGATGACTGGCTTCGTCGTGACCGTTTCGTCTTTCTAGGATGG 18039 Query 152413 TCTGGACTTCTTCTTTTTCCC-ACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGAC 152471 || || || || || || || || || || || || |||| |||||| |||| || || Sbjct 18038 TCAGGG-TTATTATTATTGCCTACAGCATACCTGGCACTTGGTGGTTGGTTTACAGGAAC 17980 Query 152472 TACTTTCGCGACGAGTTGGTATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGCGCAAA 152531 ||| || | ||| |||||||||||| || || ||| ||| ||| | || || || Sbjct 17979 TACATTTGTAACGTCTTGGTATACTCATGGTTTAGCATCTTCATATTTAGAAGGATGTAA 17920 Query 152532 CTTTCTTA-CTGCGGCAGTTTCTACTCCAGCAGATGCTATGGGTCATTCTCTTCTGCTTC 152590 ||||||| | || || ||||| |||||||| || ||||||||||||| | | | | Sbjct 17919 -TTTCTTAACAGCAGCTGTTTCAACTCCAGCGAATAGTATGGGTCATTCTTTATTATTCC 17861 Query 152591 TCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGATGGATTCAGCTCGGAGGACTCTGGG 152650 | ||||| || || |||||||| |||||| | ||| ||| || || || || ||| Sbjct 17860 TTTGGGGCCCAGAAGCTCAAGGCGATTTCACACGTTGGTGTCAACTTGGTGGTCTATGGA 17801 Query 152651 CTTTTGTGGCGCTCCACGGGGCTTTCGCTCTAATCGGTTTCATGCTTCGCCAGTTTGAAC 152710 | ||||| || || ||||| || || ||||| || ||||| |||||||| ||||||||| Sbjct 17800 CGTTTGTTGCTCTTCACGGTGCATTTGCTCTGATTGGTTTTATGCTTCGTCAGTTTGAAA 17741 Query 152711 TGGCACGTCTCA-TCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCT 152769 | |||||| ||| | || || || ||||| || ||||| || || | || || || Sbjct 17740 TTGCACGT-TCAGTAAAGATTCGCCCTTACAACGCAATTGCATTTTCAGCACCAATTTCT 17682 Query 152770 GTTTTTGTTAGCGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCA 152829 || || ||| || || | || |||||| | || ||||| ||||||| || || ||| Sbjct 17681 GTATTCGTTTCTGTATTCTTAATTTACCCTTTAGGACAATCTGGTTGGTTCTTTGCACCA 17622 Query 152830 TCTTTCGGGGTCGCAGCAATCTTCCGATTCCTTCTCTTCCTTCAAGGATTCCACAACTGG 152889 || || || || ||||| ||||||||| || | ||| | ||||| ||||| |||||| Sbjct 17621 AGCTTTGGTGTTGCTGCAATTTTCCGATTCATTTTATTCTTCCAAGGTTTCCATAACTGG 17562 Query 152890 ACATTGAATCCGTTTCATATGATGGGTGTTGCAGGTATTTTGGGAGGGGCCTTGCTTTCT 152949 || || || || || |||||||||||||| || ||| | | |||| || | |||| | Sbjct 17561 ACTTTAAACCCTTTCCATATGATGGGTGTAGCGGGTGTACTTGGAGCTGCTCTACTTTGT 17502 Query 152950 GCCATTCATGGTGTTACAGTAGAGAATACTTTGTATCAAGATGGTGAACAAGCAAACACT 153009 || |||||||| | || ||||| ||||| | | | | |||||||| |||||||| Sbjct 17501 GCAATTCATGGCGCAACTGTAGAAAATACGCTTTTTGAGGATGGTGATGGTGCAAACACA 17442 Query 153010 TTCAAAGCTTTCGACAGCACTCAAGAAGAAGAGACCTATTCGATGGTTA 153058 ||| ||||| || ||||||| ||||| || || || ||||||| Sbjct 17441 TTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACATACTCAATGGTTA 17393 Score = 369 bits (408), Expect = 4e-97 Identities = 512/709 (72%), Gaps = 6/709 (1%) Strand=Plus/Minus Query 152353 GGGTGGTTTGATGTCCTGGATGACTGGCTTAAGAGAGACCGTTTCGTTTTTGTTGGTTGG 152412 || ||||||||||| | |||||||||||| | ||||||||||| ||| | || ||| Sbjct 147543 GGTTGGTTTGATGTAGTAGATGACTGGCTTCGTCGTGACCGTTTCGTCTTTCTAGGATGG 147484 Query 152413 TCTGGACTTCTTCTTTTTCCC-ACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGAC 152471 || || || || || || || || || || || || |||| |||||| |||| || || Sbjct 147483 TCAGGG-TTATTATTATTGCCTACAGCATACCTGGCACTTGGTGGTTGGTTTACAGGAAC 147425 Query 152472 TACTTTCGCGACGAGTTGGTATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGCGCAAA 152531 ||| || | ||| |||||||||||| || || ||| ||| ||| | || || || Sbjct 147424 TACATTTGTAACGTCTTGGTATACTCATGGTTTAGCATCTTCATATTTAGAAGGATGTAA 147365 Query 152532 CTTTCTTA-CTGCGGCAGTTTCTACTCCAGCAGATGCTATGGGTCATTCTCTTCTGCTTC 152590 ||||||| | || || ||||| |||||||| || ||||||||||||| | | | | Sbjct 147364 -TTTCTTAACAGCAGCTGTTTCAACTCCAGCGAATAGTATGGGTCATTCTTTATTATTCC 147306 Query 152591 TCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGATGGATTCAGCTCGGAGGACTCTGGG 152650 | ||||| || || |||||||| |||||| | ||| ||| || || || || ||| Sbjct 147305 TTTGGGGCCCAGAAGCTCAAGGCGATTTCACACGTTGGTGTCAACTTGGTGGTCTATGGA 147246 Query 152651 CTTTTGTGGCGCTCCACGGGGCTTTCGCTCTAATCGGTTTCATGCTTCGCCAGTTTGAAC 152710 | ||||| || || ||||| || || ||||| || ||||| |||||||| ||||||||| Sbjct 147245 CGTTTGTTGCTCTTCACGGTGCATTTGCTCTGATTGGTTTTATGCTTCGTCAGTTTGAAA 147186 Query 152711 TGGCACGTCTCA-TCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCT 152769 | |||||| ||| | || || || ||||| || ||||| || || | || || || Sbjct 147185 TTGCACGT-TCAGTAAAGATTCGCCCTTACAACGCAATTGCATTTTCAGCACCAATTTCT 147127 Query 152770 GTTTTTGTTAGCGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCA 152829 || || ||| || || | || |||||| | || ||||| ||||||| || || ||| Sbjct 147126 GTATTCGTTTCTGTATTCTTAATTTACCCTTTAGGACAATCTGGTTGGTTCTTTGCACCA 147067 Query 152830 TCTTTCGGGGTCGCAGCAATCTTCCGATTCCTTCTCTTCCTTCAAGGATTCCACAACTGG 152889 || || || || ||||| ||||||||| || | ||| | ||||| ||||| |||||| Sbjct 147066 AGCTTTGGTGTTGCTGCAATTTTCCGATTCATTTTATTCTTCCAAGGTTTCCATAACTGG 147007 Query 152890 ACATTGAATCCGTTTCATATGATGGGTGTTGCAGGTATTTTGGGAGGGGCCTTGCTTTCT 152949 || || || || || |||||||||||||| || ||| | | |||| || | |||| | Sbjct 147006 ACTTTAAACCCTTTCCATATGATGGGTGTAGCGGGTGTACTTGGAGCTGCTCTACTTTGT 146947 Query 152950 GCCATTCATGGTGTTACAGTAGAGAATACTTTGTATCAAGATGGTGAACAAGCAAACACT 153009 || |||||||| | || ||||| ||||| | | | | |||||||| |||||||| Sbjct 146946 GCAATTCATGGCGCAACTGTAGAAAATACGCTTTTTGAGGATGGTGATGGTGCAAACACA 146887 Query 153010 TTCAAAGCTTTCGACAGCACTCAAGAAGAAGAGACCTATTCGATGGTTA 153058 ||| ||||| || ||||||| ||||| || || || ||||||| Sbjct 146886 TTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACATACTCAATGGTTA 146838 Score = 224 bits (248), Expect = 1e-53 Identities = 238/314 (76%), Gaps = 0/314 (0%) Strand=Plus/Minus Query 153058 ACTGCTAACCGTTTCTGGTCCCAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTT 153117 ||||| || ||||||||||| || || ||||| | |||||| |||||||| ||| | Sbjct 16348 ACTGCAAATCGTTTCTGGTCACAAATTTTTGGTGTAGCTTTTTCAAATAAACGTTGGTTA 16289 Query 153118 CATTTCTTTATGCTGTTTGTACCTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATT 153177 || ||||||||| | ||||| || || | |||||||||| | | ||||| | | Sbjct 16288 CACTTCTTTATGTTATTTGTTCCGGTAACTGGTCTTTGGATGAGTGCAATTGGTGTAGTA 16229 Query 153178 GGTCTTGCTCTCAATCTTCGTGCTTACGATTTTGTATCTCAAGAAATCAGGGCGTCAGAA 153237 ||| | ||| | || | ||||| || ||||| || || |||||||| | || | ||| Sbjct 16228 GGTTTAGCTTTAAACTTACGTGCGTATGATTTCGTTTCACAAGAAATTCGCGCTGCGGAA 16169 Query 153238 GATCCTGAATTTGAGACGTTCTATACGAAGAATATCCTTTTGAACGAAGGTCTTCGTGCT 153297 |||||||||||||| || |||||||| || ||||| ||||| ||||||||| |||||||| Sbjct 16168 GATCCTGAATTTGAAACTTTCTATACAAAAAATATTCTTTTAAACGAAGGTATTCGTGCT 16109 Query 153298 TGGTTGGCACCTGTTGACCAACCTCATGAGAACTTCGTGTTCCCTGAAGAGGTATTGCCA 153357 ||| |||| || || || |||||||| || | || |||||||| ||||| || ||| Sbjct 16108 TGGATGGCTGCTCAAGATCAGCCTCATGAAAAACTTGTATTCCCTGAGGAGGTTTTACCA 16049 Query 153358 CGAGGCAACGCTCT 153371 || || |||||||| Sbjct 16048 CGTGGAAACGCTCT 16035 Score = 224 bits (248), Expect = 1e-53 Identities = 238/314 (76%), Gaps = 0/314 (0%) Strand=Plus/Minus Query 153058 ACTGCTAACCGTTTCTGGTCCCAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTT 153117 ||||| || ||||||||||| || || ||||| | |||||| |||||||| ||| | Sbjct 145793 ACTGCAAATCGTTTCTGGTCACAAATTTTTGGTGTAGCTTTTTCAAATAAACGTTGGTTA 145734 Query 153118 CATTTCTTTATGCTGTTTGTACCTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATT 153177 || ||||||||| | ||||| || || | |||||||||| | | ||||| | | Sbjct 145733 CACTTCTTTATGTTATTTGTTCCGGTAACTGGTCTTTGGATGAGTGCAATTGGTGTAGTA 145674 Query 153178 GGTCTTGCTCTCAATCTTCGTGCTTACGATTTTGTATCTCAAGAAATCAGGGCGTCAGAA 153237 ||| | ||| | || | ||||| || ||||| || || |||||||| | || | ||| Sbjct 145673 GGTTTAGCTTTAAACTTACGTGCGTATGATTTCGTTTCACAAGAAATTCGCGCTGCGGAA 145614 Query 153238 GATCCTGAATTTGAGACGTTCTATACGAAGAATATCCTTTTGAACGAAGGTCTTCGTGCT 153297 |||||||||||||| || |||||||| || ||||| ||||| ||||||||| |||||||| Sbjct 145613 GATCCTGAATTTGAAACTTTCTATACAAAAAATATTCTTTTAAACGAAGGTATTCGTGCT 145554 Query 153298 TGGTTGGCACCTGTTGACCAACCTCATGAGAACTTCGTGTTCCCTGAAGAGGTATTGCCA 153357 ||| |||| || || || |||||||| || | || |||||||| ||||| || ||| Sbjct 145553 TGGATGGCTGCTCAAGATCAGCCTCATGAAAAACTTGTATTCCCTGAGGAGGTTTTACCA 145494 Query 153358 CGAGGCAACGCTCT 153371 || || |||||||| Sbjct 145493 CGTGGAAACGCTCT 145480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 549620332045720