Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_021559.1 Length=179063 Score E Sequences producing significant alignments: (Bits) Value seq52 710 0.0 >seq52 Length=149364 Score = 710 bits (786), Expect = 0.0 Identities = 753/988 (76%), Gaps = 10/988 (1%) Strand=Plus/Minus Query 72235 TTTTGTGAGTGGGTAACATCCACTGACAATCGCATCTACGTTGGTTGGTTTGGTGTCTTA 72294 ||||||||||||||||| |||||| || || | ||| | |||||||||||||| ||| Sbjct 86189 TTTTGTGAGTGGGTAACTAGCACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTGTTA 86130 Query 72295 ATGATCCCATGTCTTCTAACTGCTGCTGCTTGTTTCATTGTAGCATTCATCGCTGCTCCT 72354 |||||||| | | |||| ||| || | || || | ||||| ||||| ||||| Sbjct 86129 ATGATCCCTACTTTATTAACAGCTACTTCAGTATTTATCATCGCATTTATCGCAGCTCCG 86070 Query 72355 CCAGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAAC 72414 || ||||||||||| || ||| | || || ||| | ||||| || ||||||| ||||| Sbjct 86069 CCTGTCGATATCGATGGTATCCGTGAGCCTGTTTCAGGTTCATTACTATATGGAAACAAT 86010 Query 72415 ATCATCTCTGGTGCTGTAGTTCCATCTTCAAACGCAATAGGATTACACTTCTATCCCATC 72474 |||||| |||||||| | ||||| |||| ||||| || || ||||||||||| || || Sbjct 86009 ATCATCACTGGTGCTATTATTCCAACTTCTAACGCTATCGGTTTACACTTCTACCCAATT 85950 Query 72475 TGGGAAGCAGCCACTATGGACGAGTGGTTGTATAACGGAGGTCCTTACCAGTTAGTTATT 72534 ||||||||||| || | || |||||||| || || || ||||||||||| | | || Sbjct 85949 TGGGAAGCAGCTTCTCTTGATGAGTGGTTATACAATGGTGGTCCTTACCAACTTATCGTT 85890 Query 72535 TTCCACTTCCTTATTGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACAGA 72594 | ||| ||| | | || | | | | ||||||||| | |||||||| |||| | | Sbjct 85889 TGCCATTTCTTCTTAGGCGTTTGTTCATACATGGGTCGTGAGTGGGAATTATCTTTTCGT 85830 Query 72595 CTAGGAATGAGACCTTGGATATGTGTAGCATACTCAGCACCTGTATCTGCAGCATTTGCA 72654 |||| ||| | |||||||| || || ||||||||||| || ||||||| || Sbjct 85829 TTAGGTATGCGTCCTTGGATCGCAGTTGCTTACTCAGCACCAGTTGCTGCAGCTACAGCT 85770 Query 72655 GTATTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATC 72714 |||||| | | |||||| ||||||| ||||| ||||||||||||||||| |||||||| Sbjct 85769 GTATTCATCATTTATCCAATCGGTCAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTATC 85710 Query 72715 TCAGGTACGTTCAACTTCATGTTCGTGTTCCAAGCAGAACACAACATACTAATGCACCCC 72774 || ||||| |||||||||||| |||| |||||||| || |||||||| || |||||||| Sbjct 85709 TCTGGTACTTTCAACTTCATGATCGTATTCCAAGCTGAGCACAACATCCTTATGCACCCA 85650 Query 72775 TTCCATATGGCAGGTGTAGCAGGTATGTTCGGTGGTAGTCTCTTCAGTGCAATGCACGGT 72834 ||||||||| ||||| || ||| | || |||||| | ||| ||| ||||||||| Sbjct 85649 TTCCATATGCTTGGTGTTGCTGGTGTATTTGGTGGTTCATTATTCTCTGCTATGCACGGT 85590 Query 72835 TCACTTGTTACTTCATCTCTAATCAGAGAGACAACAGAGAACGAGAGTCAA--AACTACG 72892 |||||||| ||||| ||| |||| | || ||||| || ||||| ||| ||| | | Sbjct 85589 TCACTTGTAACTTCTTCTTTAATTCGTGAAACAACTGAAAACGAA--TCAGCTAACGAAG 85532 Query 72893 GCTATAAGTTCGGACAAGAAGAAGAAACATATAACATTGTTGCTGCTCATGGATACTTCG 72952 | || || ||||| |||||||||||||| || ||||| ||||| |||||||| ||||||| Sbjct 85531 GTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCATGGCTACTTCG 85472 Query 72953 GTAGATTAATCTTCCAGTATGCATCATTCAACAACTCTCGTTCATTACACTTCTTCCTCG 73012 || | ||||| ||||| ||||| || ||||||||||||||||||||||| |||||| | | Sbjct 85471 GTCGTTTAATTTTCCAATATGCTTCTTTCAACAACTCTCGTTCATTACATTTCTTCTTAG 85412 Query 73013 CTGTATTCCCTGTAGTCTGTGTATGGTTAACCTCAATGGGTATCTGTACAATGGCATTCA 73072 ||| | || || || || | ||||| || | | ||||| | || |||||||||| Sbjct 85411 CTGCTTGGCCAGTTGTTGGTATTTGGTTCACTGCTTTAGGTATTTCAACTATGGCATTCA 85352 Query 73073 ACCTTAACGGATTCAACTTCAACCAATCAGTTGTAGATGCAAACGGAAAGATTGT-ACCA 73131 || | || || ||||||||||||||||||||||||||| || | || ||| | || Sbjct 85351 ACTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAAGG---TCGTGTAATCA 85295 Query 73132 ACA--TGGGGAGATGTTCTTAACAGAGCAAACCTTGGAATGGAAGTTATGCATGAAAGAA 73189 ||| |||| ||| || | ||| | || |||||||| |||||||| |||||||| | | Sbjct 85294 ACACTTGGGCAGACATTATCAACCGTGCCAACCTTGGTATGGAAGTAATGCATGAGCGTA 85235 Query 73190 ATGCACACAACTTCCCACTAGACCTAGC 73217 | || |||||||||||| |||| |||| Sbjct 85234 ACGCTCACAACTTCCCATTAGATTTAGC 85207 Score = 347 bits (384), Expect = 1e-90 Identities = 460/636 (72%), Gaps = 8/636 (1%) Strand=Plus/Minus Query 73352 AAAAGAGAATGGTTTGACGTTCTTGATGATTGGTTAAAGAGAGATCGTTTCGTATTCATC 73411 ||| ||| |||||||| || | ||||| ||| | | || |||||||| || | Sbjct 18104 AAACGAGGTTGGTTTGATGTAGTAGATGACTGGCTTCGTCGTGACCGTTTCGTCTTTCTA 18045 Query 73412 GGATGGTCTGGTCTTTTACTTTTACCTTGTGCTTACCTAGCAATCGGAGGTTGGTTCGTA 73471 |||||||| || | ||| | || ||| || ||||| ||| | || |||||||| | Sbjct 18044 GGATGGTCAGGGTTATTATTATTGCCTACAGCATACCTGGCACTTGGTGGTTGGTTTACA 17985 Query 73472 GGAACTACTTTCGTGACCTCATGGTACACACATGGTATTGCATCCTCATATCTTGAGGGA 73531 |||||||| || || || || ||||| || |||||| | ||||| |||||| | || ||| Sbjct 17984 GGAACTACATTTGTAACGTCTTGGTATACTCATGGTTTAGCATCTTCATATTTAGAAGGA 17925 Query 73532 GCAAATTTTTTAACTGCAGCAGTATCAACACCTGGTGATGCTATGGGTCATAGTCTATTG 73591 ||||| ||||| ||||| || ||||| || | || |||||||||| | |||| Sbjct 17924 TGTAATTTCTTAACAGCAGCTGTTTCAACTCCAGCGAATAGTATGGGTCATTCTTTATTA 17865 Query 73592 TTCCTTTGGGGACCAGAGGCACAAGGAGATCTTGTACGATGGTTTCAATTAGGTGGACTA 73651 ||||||||||| ||||| || ||||| ||| | ||| |||| |||| | ||||| ||| Sbjct 17864 TTCCTTTGGGGCCCAGAAGCTCAAGGCGATTTCACACGTTGGTGTCAACTTGGTGGTCTA 17805 Query 73652 TGGAACTTTGTAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTTAGACAGTTT 73711 |||| ||||| || | || || | |||| || || ||||| |||||| | |||||| Sbjct 17804 TGGACGTTTGTTGCTCTTCACGGTGCATTTGCTCTGATTGGTTTTATGCTTCGTCAGTTT 17745 Query 73712 GAGATTGCAGGACTTGTTGGGATACGTCCTTACAACGCATTAGCTTTTTCAGCAGTTATC 73771 || |||||| | || ||| || |||||||||||| | || ||||||||| || Sbjct 17744 GAAATTGCACGTTCAGTAAAGATTCGCCCTTACAACGCAATTGCATTTTCAGCACCAATT 17685 Query 73772 GCAGTATTCACGAGCATCT---TTC-TAATATATCCTTTAGGACAGCATAGTTGGTTCTT 73827 | |||||| | ||| ||| |||| || ||||||||||| | |||||||||| Sbjct 17684 TCTGTATTC----GTTTCTGTATTCTTAATTTACCCTTTAGGACAATCTGGTTGGTTCTT 17629 Query 73828 CGCACCTTCATTCGGTGTCGCAGCAATCTTTCGTTATATTTTATTCATACAGGGTTTCCA 73887 ||||| || ||||| || ||||| || || | ||||||||| | || |||||||| Sbjct 17628 TGCACCAAGCTTTGGTGTTGCTGCAATTTTCCGATTCATTTTATTCTTCCAAGGTTTCCA 17569 Query 73888 CAATATAACTCTTAATCCATTTCATATGATGGGTGTAGCAGGTATACTTGGTGGAGCATT 73947 || ||| | || || || ||||||||||||||||| ||| ||||||| | || | Sbjct 17568 TAACTGGACTTTAAACCCTTTCCATATGATGGGTGTAGCGGGTGTACTTGGAGCTGCTCT 17509 Query 73948 ACTATGTGCCATACATGGTGCAACAGTACAGAACAC 73983 ||| ||||| || ||||| ||||| ||| | || || Sbjct 17508 ACTTTGTGCAATTCATGGCGCAACTGTAGAAAATAC 17473 Score = 347 bits (384), Expect = 1e-90 Identities = 460/636 (72%), Gaps = 8/636 (1%) Strand=Plus/Minus Query 73352 AAAAGAGAATGGTTTGACGTTCTTGATGATTGGTTAAAGAGAGATCGTTTCGTATTCATC 73411 ||| ||| |||||||| || | ||||| ||| | | || |||||||| || | Sbjct 147549 AAACGAGGTTGGTTTGATGTAGTAGATGACTGGCTTCGTCGTGACCGTTTCGTCTTTCTA 147490 Query 73412 GGATGGTCTGGTCTTTTACTTTTACCTTGTGCTTACCTAGCAATCGGAGGTTGGTTCGTA 73471 |||||||| || | ||| | || ||| || ||||| ||| | || |||||||| | Sbjct 147489 GGATGGTCAGGGTTATTATTATTGCCTACAGCATACCTGGCACTTGGTGGTTGGTTTACA 147430 Query 73472 GGAACTACTTTCGTGACCTCATGGTACACACATGGTATTGCATCCTCATATCTTGAGGGA 73531 |||||||| || || || || ||||| || |||||| | ||||| |||||| | || ||| Sbjct 147429 GGAACTACATTTGTAACGTCTTGGTATACTCATGGTTTAGCATCTTCATATTTAGAAGGA 147370 Query 73532 GCAAATTTTTTAACTGCAGCAGTATCAACACCTGGTGATGCTATGGGTCATAGTCTATTG 73591 ||||| ||||| ||||| || ||||| || | || |||||||||| | |||| Sbjct 147369 TGTAATTTCTTAACAGCAGCTGTTTCAACTCCAGCGAATAGTATGGGTCATTCTTTATTA 147310 Query 73592 TTCCTTTGGGGACCAGAGGCACAAGGAGATCTTGTACGATGGTTTCAATTAGGTGGACTA 73651 ||||||||||| ||||| || ||||| ||| | ||| |||| |||| | ||||| ||| Sbjct 147309 TTCCTTTGGGGCCCAGAAGCTCAAGGCGATTTCACACGTTGGTGTCAACTTGGTGGTCTA 147250 Query 73652 TGGAACTTTGTAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTTAGACAGTTT 73711 |||| ||||| || | || || | |||| || || ||||| |||||| | |||||| Sbjct 147249 TGGACGTTTGTTGCTCTTCACGGTGCATTTGCTCTGATTGGTTTTATGCTTCGTCAGTTT 147190 Query 73712 GAGATTGCAGGACTTGTTGGGATACGTCCTTACAACGCATTAGCTTTTTCAGCAGTTATC 73771 || |||||| | || ||| || |||||||||||| | || ||||||||| || Sbjct 147189 GAAATTGCACGTTCAGTAAAGATTCGCCCTTACAACGCAATTGCATTTTCAGCACCAATT 147130 Query 73772 GCAGTATTCACGAGCATCT---TTC-TAATATATCCTTTAGGACAGCATAGTTGGTTCTT 73827 | |||||| | ||| ||| |||| || ||||||||||| | |||||||||| Sbjct 147129 TCTGTATTC----GTTTCTGTATTCTTAATTTACCCTTTAGGACAATCTGGTTGGTTCTT 147074 Query 73828 CGCACCTTCATTCGGTGTCGCAGCAATCTTTCGTTATATTTTATTCATACAGGGTTTCCA 73887 ||||| || ||||| || ||||| || || | ||||||||| | || |||||||| Sbjct 147073 TGCACCAAGCTTTGGTGTTGCTGCAATTTTCCGATTCATTTTATTCTTCCAAGGTTTCCA 147014 Query 73888 CAATATAACTCTTAATCCATTTCATATGATGGGTGTAGCAGGTATACTTGGTGGAGCATT 73947 || ||| | || || || ||||||||||||||||| ||| ||||||| | || | Sbjct 147013 TAACTGGACTTTAAACCCTTTCCATATGATGGGTGTAGCGGGTGTACTTGGAGCTGCTCT 146954 Query 73948 ACTATGTGCCATACATGGTGCAACAGTACAGAACAC 73983 ||| ||||| || ||||| ||||| ||| | || || Sbjct 146953 ACTTTGTGCAATTCATGGCGCAACTGTAGAAAATAC 146918 Score = 178 bits (196), Expect = 1e-39 Identities = 237/326 (73%), Gaps = 4/326 (1%) Strand=Plus/Minus Query 74077 TATGATTACTGCTAACAGATTCTGGTCACAGATATTTGGTATAGCATTTTCAAACAAAAG 74136 ||||| ||||| || | ||||||||||| || |||||| |||| |||||||| ||| | Sbjct 16353 TATGA--ACTGCAAATCGTTTCTGGTCACAAATTTTTGGTGTAGCTTTTTCAAATAAACG 16296 Query 74137 ATTCTTACACTTCCTTATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCTATAGG 74196 | ||||||||| ||||||| || || || || | ||| | |||| | || || Sbjct 16295 TTGGTTACACTTCTTTATGTTATTTGTTCCGGTAACTGGTCTTTGGATGAGTGCAATTGG 16236 Query 74197 TATCGTAGGTCTAGCACTTAACCTTA-GAGCATACGACTTTGTATCTCAAGAGATAAGAG 74255 | | |||||| |||| |||| |||| | || || || || || || ||||| || | | Sbjct 16235 TGTAGTAGGTTTAGC-TTTAAACTTACGTGCGTATGATTTCGTTTCACAAGAAATTCGCG 16177 Query 74256 CAGCAGAAGACCCAGAGTTTGAAACCTTCTACACTAAGAACATTCTTCTTAATGAAGGTA 74315 | || ||||| || || |||||||| ||||| || || || |||||| | || ||||||| Sbjct 16176 CTGCGGAAGATCCTGAATTTGAAACTTTCTATACAAAAAATATTCTTTTAAACGAAGGTA 16117 Query 74316 TGAGAGCATGGATGTCATCTGTCGATCAACCCCATGAGAACTTTGTGTTCCCAGAAGAAG 74375 | | || |||||| | || ||||| || ||||| || |||| ||||| || || | Sbjct 16116 TTCGTGCTTGGATGGCTGCTCAAGATCAGCCTCATGAAAAACTTGTATTCCCTGAGGAGG 16057 Query 74376 TCTTGCCACGAGGCAACGCACTATAA 74401 | || ||||| || ||||| || ||| Sbjct 16056 TTTTACCACGTGGAAACGCTCTTTAA 16031 Score = 178 bits (196), Expect = 1e-39 Identities = 237/326 (73%), Gaps = 4/326 (1%) Strand=Plus/Minus Query 74077 TATGATTACTGCTAACAGATTCTGGTCACAGATATTTGGTATAGCATTTTCAAACAAAAG 74136 ||||| ||||| || | ||||||||||| || |||||| |||| |||||||| ||| | Sbjct 145798 TATGA--ACTGCAAATCGTTTCTGGTCACAAATTTTTGGTGTAGCTTTTTCAAATAAACG 145741 Query 74137 ATTCTTACACTTCCTTATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCTATAGG 74196 | ||||||||| ||||||| || || || || | ||| | |||| | || || Sbjct 145740 TTGGTTACACTTCTTTATGTTATTTGTTCCGGTAACTGGTCTTTGGATGAGTGCAATTGG 145681 Query 74197 TATCGTAGGTCTAGCACTTAACCTTA-GAGCATACGACTTTGTATCTCAAGAGATAAGAG 74255 | | |||||| |||| |||| |||| | || || || || || || ||||| || | | Sbjct 145680 TGTAGTAGGTTTAGC-TTTAAACTTACGTGCGTATGATTTCGTTTCACAAGAAATTCGCG 145622 Query 74256 CAGCAGAAGACCCAGAGTTTGAAACCTTCTACACTAAGAACATTCTTCTTAATGAAGGTA 74315 | || ||||| || || |||||||| ||||| || || || |||||| | || ||||||| Sbjct 145621 CTGCGGAAGATCCTGAATTTGAAACTTTCTATACAAAAAATATTCTTTTAAACGAAGGTA 145562 Query 74316 TGAGAGCATGGATGTCATCTGTCGATCAACCCCATGAGAACTTTGTGTTCCCAGAAGAAG 74375 | | || |||||| | || ||||| || ||||| || |||| ||||| || || | Sbjct 145561 TTCGTGCTTGGATGGCTGCTCAAGATCAGCCTCATGAAAAACTTGTATTCCCTGAGGAGG 145502 Query 74376 TCTTGCCACGAGGCAACGCACTATAA 74401 | || ||||| || ||||| || ||| Sbjct 145501 TTTTACCACGTGGAAACGCTCTTTAA 145476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 572871444563080