Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq286 84.2 2e-11 seq242 84.2 2e-11 seq280 82.4 6e-11 seq53 82.4 6e-11 >seq286 Length=1206827 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 107649 GATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAG 107708 || || || ||| | ||| || |||||| | || || | ||||| || ||||||||| Sbjct 1113615 GACAAGGAGGGCATCCCCCCCGACCAGCAGCGCCTGATCTTCGCGGGCAAGCAGCTGGAG 1113674 Query 107709 GACGCCAAAACAATGGCGGACTACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768 |||| | || |||||||||||||||| || |||||||| || ||||| ||||| || Sbjct 1113675 GACGGCCGCACGCTGGCGGACTACAACATCCAGAAGGAGTCCACCCTGCACCTGGTGCTG 1113734 Query 107769 AGATTGCGAGGGGG 107782 | |||| || || Sbjct 1113735 CGCCTGCGCGGCGG 1113748 >seq242 Length=371688 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 107649 GATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAG 107708 || || || ||| | ||| || |||||| | || || | ||||| || ||||||||| Sbjct 197928 GACAAGGAGGGCATCCCCCCTGACCAGCAGCGCCTGATCTTCGCGGGCAAGCAGCTGGAG 197869 Query 107709 GACGCCAAAACAATGGCGGACTACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768 |||| | || |||||||||||||||| || |||||||| || ||||| ||||| || Sbjct 197868 GACGGCCGCACGCTGGCGGACTACAACATCCAGAAGGAGTCCACCCTGCACCTGGTGCTG 197809 Query 107769 AGATTGCGAGGGGG 107782 | |||| || || Sbjct 197808 CGCCTGCGCGGCGG 197795 >seq280 Length=4282644 Score = 82.4 bits (90), Expect = 6e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 107670 GATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGAC 107729 || |||||| | || || | ||||| || ||||||||||||| | || |||||||| Sbjct 2001581 GACCAGCAGCGCCTGATCTTCGCGGGCAAGCAGCTGGAGGACGGCCGCACGCTGGCGGAC 2001522 Query 107730 TACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 |||||||| || |||||||| || ||||| ||||| || | |||| || || Sbjct 2001521 TACAACATCCAGAAGGAGTCCACCCTGCACCTGGTGCTGCGCCTGCGCGGCGG 2001469 >seq53 Length=124359 Score = 82.4 bits (90), Expect = 6e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 107670 GATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGAC 107729 || |||||| | || || | ||||| || ||||||||||||| | || |||||||| Sbjct 80784 GACCAGCAGCGCCTGATCTTCGCGGGCAAGCAGCTGGAGGACGGCCGCACGCTGGCGGAC 80725 Query 107730 TACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 |||||||| || |||||||| || ||||| ||||| || | |||| || || Sbjct 80724 TACAACATCCAGAAGGAGTCCACCCTGCACCTGGTGCTGCGCCTGCGCGGAGG 80672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398875336745389