Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_023584.1 Length=170438 Score E Sequences producing significant alignments: (Bits) Value seq52 756 0.0 >seq52 Length=149364 Score = 756 bits (838), Expect = 0.0 Identities = 773/1006 (77%), Gaps = 2/1006 (0%) Strand=Plus/Minus Query 157051 TTCTGCGAGTGGGTAACTTCCACCAACAACCGTTTGTATGTTGGTTGGTTCGGTGTGCTT 157110 || || |||||||||||| ||| | |||||||| || | |||||||| |||||| | Sbjct 86189 TTTTGTGAGTGGGTAACTAGCACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTGTTA 86130 Query 157111 ATGATTCCAACATTGCTTGCAGCAACTATCTGC-TTCATTGTTGCATTCGTAGCAGCACC 157169 ||||| || || || | |||| ||| || | || || | ||||| | ||||| || Sbjct 86129 ATGATCCCTACTTTATTAACAGCTACT-TCAGTATTTATCATCGCATTTATCGCAGCTCC 86071 Query 157170 TCCCGTTGATATCGACGGTATTCGCGAACCAGTTGCTGGTTCTCTCATGTATGGCAACAA 157229 || || |||||||| ||||| || || || ||| | ||||| | | ||||| ||||| Sbjct 86070 GCCTGTCGATATCGATGGTATCCGTGAGCCTGTTTCAGGTTCATTACTATATGGAAACAA 86011 Query 157230 CATCATCTCTGGTGCAGTTGTTCCTTCTTCAAACGCAATCGGTCTTCACTTCTACCCCAT 157289 |||||| ||||||| || |||| |||| ||||| |||||| | ||||||||||| || Sbjct 86010 TATCATCACTGGTGCTATTATTCCAACTTCTAACGCTATCGGTTTACACTTCTACCCAAT 85951 Query 157290 CTGGGAAGCAGCATCACTTGATGAGTGGCTTTACAACGGTGGTCCTTTCCAACTGGTAGT 157349 ||||||||||| || |||||||||||| | ||||| |||||||||| |||||| | || Sbjct 85950 TTGGGAAGCAGCTTCTCTTGATGAGTGGTTATACAATGGTGGTCCTTACCAACTTATCGT 85891 Query 157350 CTTTCACTTCCTGATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTTTCTTACCG 157409 | || ||| | | ||| | | | | || ||||| |||||||||||| | |||| || Sbjct 85890 TTGCCATTTCTTCTTAGGCGTTTGTTCATACATGGGTCGTGAGTGGGAATTATCTTTTCG 85831 Query 157410 TTTAGGTATGCGCCCCTGGATCTGTGTTGCCTACTCGGCACCAGTCGCTGCTGCGAGTGC 157469 |||||||||||| || |||||| ||||| ||||| |||||||| ||||| || | || Sbjct 85830 TTTAGGTATGCGTCCTTGGATCGCAGTTGCTTACTCAGCACCAGTTGCTGCAGCTACAGC 85771 Query 157470 AGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTAT 157529 |||||| || | ||||| ||||||||||||||||||| |||| ||||||| | ||||| Sbjct 85770 TGTATTCATCATTTATCCAATCGGTCAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTAT 85711 Query 157530 CTCTGGTACTTTTAACTATATGCTCGTCTTCCAGGCAGAGCACAATATTCTTATGCATCC 157589 |||||||||||| |||| ||| |||| ||||| || |||||||| || |||||||| || Sbjct 85710 CTCTGGTACTTTCAACTTCATGATCGTATTCCAAGCTGAGCACAACATCCTTATGCACCC 85651 Query 157590 GTTCCACATGCTCGGCGTTGCTGGGGTATTCGGTGGATCTTTGTTCTCTGCTATGCACGG 157649 ||||| ||||| || |||||||| ||||| ||||| || || ||||||||||||||||| Sbjct 85650 ATTCCATATGCTTGGTGTTGCTGGTGTATTTGGTGGTTCATTATTCTCTGCTATGCACGG 85591 Query 157650 AAGTCTCGTTACTTCCTCGCTTGTTCGTGAAACAACTGAAACAGAGTCACAGAACTATGG 157709 || || ||||| || | |||||||||||||||||| || ||| ||| | || Sbjct 85590 TTCACTTGTAACTTCTTCTTTAATTCGTGAAACAACTGAAAACGAATCAGCTAACGAAGG 85531 Query 157710 TTACAAGTTCGGTCAAGAAGAAGAGACGTACAACATCGTTGCTGCACACGGTTACTTCGG 157769 |||||| ||||||||||||||||| || |||||||||||||| || || || |||||||| Sbjct 85530 TTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCATGGCTACTTCGG 85471 Query 157770 TCGCCTGATCTTCCAATACGCTTCATTCAACAACAGCAGAAGTCTTCACTTCTTCCTCGC 157829 ||| | || |||||||| ||||| ||||||||| | | || |||||| | || Sbjct 85470 TCGTTTAATTTTCCAATATGCTTCTTTCAACAACTCTCGTTCATTACATTTCTTCTTAGC 85411 Query 157830 CGCATGGCCTGTTGTCGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCAA 157889 || ||||| ||||| || || ||||||||||| | || | || ||||||||||| Sbjct 85410 TGCTTGGCCAGTTGTTGGTATTTGGTTCACTGCTTTAGGTATTTCAACTATGGCATTCAA 85351 Query 157890 CCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACAC 157949 | | || ||||||||||||||||| || | | ||| || |||||||| | ||||| Sbjct 85350 CTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAAGGTCGTGTAATCAACAC 85291 Query 157950 CTGGGCAGATGTCCTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGC 158009 |||||||| | | ||||| || |||||||||||||| ||||||||||||||||| Sbjct 85290 TTGGGCAGACATTATCAACCGTGCCAACCTTGGTATGGAAGTAATGCATGAGCGTAACGC 85231 Query 158010 ACACAACTTCCCACTGGATCTTGCTGCTGCAGAATCAACACCTGTT 158055 |||||||||||| | ||| | |||| || ||| | || ||||| Sbjct 85230 TCACAACTTCCCATTAGATTTAGCTGTTGTTGAAGCTCCAGCTGTT 85185 Score = 354 bits (392), Expect = 9e-93 Identities = 512/711 (72%), Gaps = 10/711 (1%) Strand=Plus/Minus Query 158767 GAGGATGGTTTGACATACTCGACGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGCT 158826 |||| |||||||| || | || ||||||||| || || |||||||| ||| | || | Sbjct 18100 GAGGTTGGTTTGATGTAGTAGATGACTGGCTTCGTCGTGACCGTTTCGTCTTTCTAGGAT 18041 Query 158827 GGTCTGGACTTCTTCTTCTACCC-ACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGC 158885 |||| || || || || | || || || || || || |||| |||||| |||| || Sbjct 18040 GGTCAGGG-TTATTATTATTGCCTACAGCATACCTGGCACTTGGTGGTTGGTTTACAGGA 17982 Query 158886 ACGACTTTCGCTACGAGCTGGTATACACATGGACTCGCTACTTCCTATCTTGAGGG-TGC 158944 || || || | ||| |||||||| ||||| | || |||| ||| | || || || Sbjct 17981 ACTACATTTGTAACGTCTTGGTATACTCATGGTTTAGCATCTTCATATTTAGAAGGATGT 17922 Query 158945 AAACTTTCTTA-CAGCAGCAGTTTCGACTCCAGCTGATGCTATGGGTCATTCTCTTCTGC 159003 || ||||||| ||||||| ||||| |||||||| || ||||||||||||| | | Sbjct 17921 AA--TTTCTTAACAGCAGCTGTTTCAACTCCAGCGAATAGTATGGGTCATTCTTTATTAT 17864 Query 159004 TTCTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGGGTC-CAACTTGGGGGACTC 159062 | || ||||| || || |||||||| |||||| || || ||| |||||||| || || Sbjct 17863 TCCTTTGGGGCCCAGAAGCTCAAGGCGATTTCA-CACGTTGGTGTCAACTTGGTGGTCTA 17805 Query 159063 TGGAATTTTGTGGCGCTCCACGGTGCCTTTGCCCTAATTGGTTTCATGCTTCGCCAGTTT 159122 |||| ||||| || || |||||||| ||||| || |||||||| |||||||| |||||| Sbjct 17804 TGGACGTTTGTTGCTCTTCACGGTGCATTTGCTCTGATTGGTTTTATGCTTCGTCAGTTT 17745 Query 159123 GAACTGGCACGTCTCA-TCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTAT 159181 ||| | |||||| ||| | || || || ||||| || ||||| || || | || || Sbjct 17744 GAAATTGCACGT-TCAGTAAAGATTCGCCCTTACAACGCAATTGCATTTTCAGCACCAAT 17686 Query 159182 TGCTGTTTTTGTCAGCGTCTTCCTTATCTACCCACTTGGTCAGTCCAGTTGGTTTTTCGC 159241 | |||| || || || ||| | || ||||| | || || || ||||||| || || Sbjct 17685 TTCTGTATTCGTTTCTGTATTCTTAATTTACCCTTTAGGACAATCTGGTTGGTTCTTTGC 17626 Query 159242 TCCGTCCTTTGGGGTGGCCGCAATATTCAGGTTCCTACTCTTCCTACAAGGGTTCCACAA 159301 || |||||| || || ||||| ||| | ||| | | ||| | ||||| ||||| || Sbjct 17625 ACCAAGCTTTGGTGTTGCTGCAATTTTCCGATTCATTTTATTCTTCCAAGGTTTCCATAA 17566 Query 159302 TTGGACACTAAACCCCTTCCATATGATGGGAGTTGCTGGTATCCTAGGTGGAGCACTTCT 159361 ||||| ||||||| |||||||||||||| || || ||| | || || | || || || Sbjct 17565 CTGGACTTTAAACCCTTTCCATATGATGGGTGTAGCGGGTGTACTTGGAGCTGCTCTACT 17506 Query 159362 ATCTGCTATTCATGGGGTCACAGTTGAAAATACATTATACGAGGATGGAGAACAAGCAAA 159421 | ||| |||||||| | || || |||||||| | | |||||||| || ||||| Sbjct 17505 TTGTGCAATTCATGGCGCAACTGTAGAAAATACGCTTTTTGAGGATGGTGATGGTGCAAA 17446 Query 159422 CACCTTTAAGGCGTTTGATTCAACTCAAGAGGAGGAGACTTATTCTATGGT 159472 ||| || || ||| | ||||||||| || || || || || ||||| Sbjct 17445 CACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACATACTCAATGGT 17395 Score = 354 bits (392), Expect = 9e-93 Identities = 512/711 (72%), Gaps = 10/711 (1%) Strand=Plus/Minus Query 158767 GAGGATGGTTTGACATACTCGACGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGCT 158826 |||| |||||||| || | || ||||||||| || || |||||||| ||| | || | Sbjct 147545 GAGGTTGGTTTGATGTAGTAGATGACTGGCTTCGTCGTGACCGTTTCGTCTTTCTAGGAT 147486 Query 158827 GGTCTGGACTTCTTCTTCTACCC-ACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGC 158885 |||| || || || || | || || || || || || |||| |||||| |||| || Sbjct 147485 GGTCAGGG-TTATTATTATTGCCTACAGCATACCTGGCACTTGGTGGTTGGTTTACAGGA 147427 Query 158886 ACGACTTTCGCTACGAGCTGGTATACACATGGACTCGCTACTTCCTATCTTGAGGG-TGC 158944 || || || | ||| |||||||| ||||| | || |||| ||| | || || || Sbjct 147426 ACTACATTTGTAACGTCTTGGTATACTCATGGTTTAGCATCTTCATATTTAGAAGGATGT 147367 Query 158945 AAACTTTCTTA-CAGCAGCAGTTTCGACTCCAGCTGATGCTATGGGTCATTCTCTTCTGC 159003 || ||||||| ||||||| ||||| |||||||| || ||||||||||||| | | Sbjct 147366 AA--TTTCTTAACAGCAGCTGTTTCAACTCCAGCGAATAGTATGGGTCATTCTTTATTAT 147309 Query 159004 TTCTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGGGTC-CAACTTGGGGGACTC 159062 | || ||||| || || |||||||| |||||| || || ||| |||||||| || || Sbjct 147308 TCCTTTGGGGCCCAGAAGCTCAAGGCGATTTCA-CACGTTGGTGTCAACTTGGTGGTCTA 147250 Query 159063 TGGAATTTTGTGGCGCTCCACGGTGCCTTTGCCCTAATTGGTTTCATGCTTCGCCAGTTT 159122 |||| ||||| || || |||||||| ||||| || |||||||| |||||||| |||||| Sbjct 147249 TGGACGTTTGTTGCTCTTCACGGTGCATTTGCTCTGATTGGTTTTATGCTTCGTCAGTTT 147190 Query 159123 GAACTGGCACGTCTCA-TCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTAT 159181 ||| | |||||| ||| | || || || ||||| || ||||| || || | || || Sbjct 147189 GAAATTGCACGT-TCAGTAAAGATTCGCCCTTACAACGCAATTGCATTTTCAGCACCAAT 147131 Query 159182 TGCTGTTTTTGTCAGCGTCTTCCTTATCTACCCACTTGGTCAGTCCAGTTGGTTTTTCGC 159241 | |||| || || || ||| | || ||||| | || || || ||||||| || || Sbjct 147130 TTCTGTATTCGTTTCTGTATTCTTAATTTACCCTTTAGGACAATCTGGTTGGTTCTTTGC 147071 Query 159242 TCCGTCCTTTGGGGTGGCCGCAATATTCAGGTTCCTACTCTTCCTACAAGGGTTCCACAA 159301 || |||||| || || ||||| ||| | ||| | | ||| | ||||| ||||| || Sbjct 147070 ACCAAGCTTTGGTGTTGCTGCAATTTTCCGATTCATTTTATTCTTCCAAGGTTTCCATAA 147011 Query 159302 TTGGACACTAAACCCCTTCCATATGATGGGAGTTGCTGGTATCCTAGGTGGAGCACTTCT 159361 ||||| ||||||| |||||||||||||| || || ||| | || || | || || || Sbjct 147010 CTGGACTTTAAACCCTTTCCATATGATGGGTGTAGCGGGTGTACTTGGAGCTGCTCTACT 146951 Query 159362 ATCTGCTATTCATGGGGTCACAGTTGAAAATACATTATACGAGGATGGAGAACAAGCAAA 159421 | ||| |||||||| | || || |||||||| | | |||||||| || ||||| Sbjct 146950 TTGTGCAATTCATGGCGCAACTGTAGAAAATACGCTTTTTGAGGATGGTGATGGTGCAAA 146891 Query 159422 CACCTTTAAGGCGTTTGATTCAACTCAAGAGGAGGAGACTTATTCTATGGT 159472 ||| || || ||| | ||||||||| || || || || || ||||| Sbjct 146890 CACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACATACTCAATGGT 146840 Score = 167 bits (184), Expect = 3e-36 Identities = 226/313 (72%), Gaps = 4/313 (1%) Strand=Plus/Minus Query 159474 ACTGCAAACCGCTTCTGGTCGCAGATCTTCGGCATTGCGTTTTCTAACAAGCGGTGGCTT 159533 |||||||| || |||||||| || || || || | || ||||| || || || ||| | Sbjct 16348 ACTGCAAATCGTTTCTGGTCACAAATTTTTGGTGTAGCTTTTTCAAATAAACGTTGGTTA 16289 Query 159534 CATTTCTTTATGTTGTTTGTGCCTGTTATGGGTCTATGGACA--TCCAGTATTGGCATTA 159591 || ||||||||||| ||||| || || | ||||| |||| | || ||||| | Sbjct 16288 CACTTCTTTATGTTATTTGTTCCGGTAACTGGTCTTTGGATGAGTGCA--ATTGGTGTAG 16231 Query 159592 TTGGTCTTGCTCTCAATCTTCGTGCTTACGATTTCGTGAGTCAAGAGATCAGAGCAGCAG 159651 | ||| | ||| | || | ||||| || |||||||| ||||| || | || || | Sbjct 16230 TAGGTTTAGCTTTAAACTTACGTGCGTATGATTTCGTTTCACAAGAAATTCGCGCTGCGG 16171 Query 159652 AAGATCCAGAATTTGAAACGTTCTACACCAAGAACATTCTTCTGAATGAAGGACTACGTG 159711 ||||||| ||||||||||| ||||| || || || |||||| | || ||||| | |||| Sbjct 16170 AAGATCCTGAATTTGAAACTTTCTATACAAAAAATATTCTTTTAAACGAAGGTATTCGTG 16111 Query 159712 CTTGGTTGGCACCTGCTGATCAACCCCATGAAAACTTCATCTTCCCAGAAGAAGTTCTAC 159771 ||||| |||| || ||||| || |||||||| | | ||||| || || ||| ||| Sbjct 16110 CTTGGATGGCTGCTCAAGATCAGCCTCATGAAAAACTTGTATTCCCTGAGGAGGTTTTAC 16051 Query 159772 CAAGAGGTAACGC 159784 || | || ||||| Sbjct 16050 CACGTGGAAACGC 16038 Score = 167 bits (184), Expect = 3e-36 Identities = 226/313 (72%), Gaps = 4/313 (1%) Strand=Plus/Minus Query 159474 ACTGCAAACCGCTTCTGGTCGCAGATCTTCGGCATTGCGTTTTCTAACAAGCGGTGGCTT 159533 |||||||| || |||||||| || || || || | || ||||| || || || ||| | Sbjct 145793 ACTGCAAATCGTTTCTGGTCACAAATTTTTGGTGTAGCTTTTTCAAATAAACGTTGGTTA 145734 Query 159534 CATTTCTTTATGTTGTTTGTGCCTGTTATGGGTCTATGGACA--TCCAGTATTGGCATTA 159591 || ||||||||||| ||||| || || | ||||| |||| | || ||||| | Sbjct 145733 CACTTCTTTATGTTATTTGTTCCGGTAACTGGTCTTTGGATGAGTGCA--ATTGGTGTAG 145676 Query 159592 TTGGTCTTGCTCTCAATCTTCGTGCTTACGATTTCGTGAGTCAAGAGATCAGAGCAGCAG 159651 | ||| | ||| | || | ||||| || |||||||| ||||| || | || || | Sbjct 145675 TAGGTTTAGCTTTAAACTTACGTGCGTATGATTTCGTTTCACAAGAAATTCGCGCTGCGG 145616 Query 159652 AAGATCCAGAATTTGAAACGTTCTACACCAAGAACATTCTTCTGAATGAAGGACTACGTG 159711 ||||||| ||||||||||| ||||| || || || |||||| | || ||||| | |||| Sbjct 145615 AAGATCCTGAATTTGAAACTTTCTATACAAAAAATATTCTTTTAAACGAAGGTATTCGTG 145556 Query 159712 CTTGGTTGGCACCTGCTGATCAACCCCATGAAAACTTCATCTTCCCAGAAGAAGTTCTAC 159771 ||||| |||| || ||||| || |||||||| | | ||||| || || ||| ||| Sbjct 145555 CTTGGATGGCTGCTCAAGATCAGCCTCATGAAAAACTTGTATTCCCTGAGGAGGTTTTAC 145496 Query 159772 CAAGAGGTAACGC 159784 || | || ||||| Sbjct 145495 CACGTGGAAACGC 145483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545271548408080