Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_023587.1 Length=189311 Score E Sequences producing significant alignments: (Bits) Value seq52 717 0.0 >seq52 Length=149364 Score = 717 bits (794), Expect = 0.0 Identities = 745/973 (77%), Gaps = 3/973 (0%) Strand=Plus/Minus Query 177558 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 177617 || || |||||||||||| || | ||||| | || |||||||||| || || | Sbjct 86189 TTTTGTGAGTGGGTAACTAGCACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTGTTA 86130 Query 177618 ATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCGTCGCTGCTCC 177676 ||||| || ||| | || |||| ||| || | || ||| |||| || |||| ||||| Sbjct 86129 ATGATCCCTACTTTATTAACAGCTACT-TCAGTATTTATCATCGCATTTATCGCAGCTCC 86071 Query 177677 CCCCGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 177736 || || || ||||| || |||||||| || || | |||||| | | ||||| ||||| Sbjct 86070 GCCTGTCGATATCGATGGTATCCGTGAGCCTGTTTCAGGTTCATTACTATATGGAAACAA 86011 Query 177737 CATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 177796 |||||| ||||||| || | ||| |||| ||||| || ||| | |||||||| || || Sbjct 86010 TATCATCACTGGTGCTATTATTCCAACTTCTAACGCTATCGGTTTACACTTCTACCCAAT 85951 Query 177797 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 177856 |||||||| || || |||||||||||| | || || |||||||||| |||||| | || Sbjct 85950 TTGGGAAGCAGCTTCTCTTGATGAGTGGTTATACAATGGTGGTCCTTACCAACTTATCGT 85891 Query 177857 CTTTCACTTCCTTATCGGCATCTATGCATATATGGGACGTGAGTGGGAACTTTCATACCG 177916 | || ||| | | ||| | | | |||| ||||| |||||||||||| | || | || Sbjct 85890 TTGCCATTTCTTCTTAGGCGTTTGTTCATACATGGGTCGTGAGTGGGAATTATCTTTTCG 85831 Query 177917 TCTAGGTATGCGCCCCTGGATCTGTGTTGCATACTCTGCACCTGTTGCAGCAGCATCCGC 177976 | |||||||||| || |||||| ||||| ||||| ||||| ||||| ||||| | || Sbjct 85830 TTTAGGTATGCGTCCTTGGATCGCAGTTGCTTACTCAGCACCAGTTGCTGCAGCTACAGC 85771 Query 177977 AGTCTTTCTAGTCTATCCTTTCGGTCAAGGTTCATTCTCCGATGCTATGCCTCTTGGTAT 178036 || || | | ||||| ||||||||||||| ||||| |||| ||||||| | ||||| Sbjct 85770 TGTATTCATCATTTATCCAATCGGTCAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTAT 85711 Query 178037 CTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCACCC 178096 |||||||||||| |||| |||| | ||||||||||| || ||||| |||||||||||||| Sbjct 85710 CTCTGGTACTTTCAACTTCATGATCGTATTCCAAGCTGAGCACAACATCCTTATGCACCC 85651 Query 178097 GTTCCACATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGG 178156 ||||| ||||| ||||||||||| ||||| ||||| || | |||||||||||||| || Sbjct 85650 ATTCCATATGCTTGGTGTTGCTGGTGTATTTGGTGGTTCATTATTCTCTGCTATGCACGG 85591 Query 178157 AAGTCTCGTTACTTCTTCGCTCGTCCGTGAGACGACAGAAACTGAGTCCCAGAACTATGG 178216 || || |||||||| | | ||||| || || |||| || || ||| | || Sbjct 85590 TTCACTTGTAACTTCTTCTTTAATTCGTGAAACAACTGAAAACGAATCAGCTAACGAAGG 85531 Query 178217 TTACAAGTTCGGACAAGAAGAAGAAACATATAACATCGTCGCAGCCCATGGTTACTTCGG 178276 |||||| ||||| |||||||||||||| || |||||||| ||||| ||||| |||||||| Sbjct 85530 TTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCATGGCTACTTCGG 85471 Query 178277 TCGTTTGATCTTCCAATATGCATCGTTCAACAACTCCCGTTCACTGCACTTCTTCCTCGC 178336 |||||| || ||||||||||| || ||||||||||| |||||| | || |||||| | || Sbjct 85470 TCGTTTAATTTTCCAATATGCTTCTTTCAACAACTCTCGTTCATTACATTTCTTCTTAGC 85411 Query 178337 AGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTTGGTGTATCCACCATGGCATTTAA 178396 || ||||| || ||||| || |||||||| || | ||| | || || |||||||| || Sbjct 85410 TGCTTGGCCAGTTGTTGGTATTTGGTTCACTGCTTTAGGTATTTCAACTATGGCATTCAA 85351 Query 178397 CCTCAATGGATTCAACTTCAACCAGTCCATCCTCGACGGACAAGGACGTGTCCTCAACAC 178456 | | ||||| |||||||||||||| || | | || |||||| ||||| ||||||| Sbjct 85350 CTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAAGGTCGTGTAATCAACAC 85291 Query 178457 ATGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAAAGAAATAG 178516 ||||||||| | ||||||||||| || || |||||||| ||||| || | || | Sbjct 85290 TTGGGCAGACATTATCAACCGTGCCAACCTTGGTATGGAAGTAATGCATGAGCGTAA-CG 85232 Query 178517 CACATAACTTCCC 178529 | || |||||||| Sbjct 85231 CTCACAACTTCCC 85219 Score = 412 bits (456), Expect = 4e-110 Identities = 524/715 (73%), Gaps = 6/715 (1%) Strand=Plus/Minus Query 178926 AACGAGGGGCTGGTTCGATGTCTTGGATGACTGGCTTAATCGGGATCGCTTTGTCTTTGT 178985 ||||||| ||||| ||||| | |||||||||||| ||| || || || |||||| | Sbjct 18103 AACGAGGT--TGGTTTGATGTAGTAGATGACTGGCTTCGTCGTGACCGTTTCGTCTTTCT 18046 Query 178986 GGGTTGGTCTGGACTCCTACTTCTTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTAC 179045 || ||||| || | || | | || || || || || || |||| |||||| |||| Sbjct 18045 AGGATGGTCAGGGTTATTATTATTGCCTACAGCATACCTGGCACTTGGTGGTTGGTTTAC 17986 Query 179046 TGGGACAGCTTTTGTTACGAGTTGGTACACCCATGGTCTTGCTAGTTCCTATCTTGAAGG 179105 || || | ||||| ||| |||||| || |||||| | || ||| ||| | ||||| Sbjct 17985 AGGAACTACATTTGTAACGTCTTGGTATACTCATGGTTTAGCATCTTCATATTTAGAAGG 17926 Query 179106 TGCTAACTTTCTTA-CGGCAGCTGTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTC 179164 ||| ||||||| | |||||||| || || || || || ||||||||||||| | Sbjct 17925 ATGTAA-TTTCTTAACAGCAGCTGTTTCAACTCCAGCGAATAGTATGGGTCATTCTTTAT 17867 Query 179165 TTCTACTTTGGGGTCCTGAGTCTCAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGAC 179224 | | |||||||| || || |||| || ||||| || ||||| |||||||| || | Sbjct 17866 TATTCCTTTGGGGCCCAGAAGCTCAAGGCGATTTCACACGTTGGTGTCAACTTGGTGGTC 17807 Query 179225 TATGGAATTTCGTGGCTCTCCACGGTGCCTTCGCCCTAATTGGATTCATGCTTCGTCAGT 179284 |||||| || || ||||| |||||||| || || || ||||| || ||||||||||||| Sbjct 17806 TATGGACGTTTGTTGCTCTTCACGGTGCATTTGCTCTGATTGGTTTTATGCTTCGTCAGT 17747 Query 179285 TTGAACTGGCACGTCTCA-TCGGTATCCGTCCTTACAATGCGATTGCTTTTACTGGTCCT 179343 ||||| | |||||| ||| | || || |||||||| || ||||| ||| | | || Sbjct 17746 TTGAAATTGCACGT-TCAGTAAAGATTCGCCCTTACAACGCAATTGCATTTTCAGCACCA 17688 Query 179344 ATTGCCGTATTCGTTAGTGTATTTCTCATCTACCCACTTGGACAATCCAGTTGGTTCTTT 179403 ||| | ||||||||| |||||| | || ||||| | |||||||| ||||||||||| Sbjct 17687 ATTTCTGTATTCGTTTCTGTATTCTTAATTTACCCTTTAGGACAATCTGGTTGGTTCTTT 17628 Query 179404 GCGCCATCGTTTGGTGTTGCGGCGATCTTTAGATTCCTACTTTTCTTACAAGGTTTCCAC 179463 || ||| ||||||||||| || || || ||||| | | ||||| ||||||||||| Sbjct 17627 GCACCAAGCTTTGGTGTTGCTGCAATTTTCCGATTCATTTTATTCTTCCAAGGTTTCCAT 17568 Query 179464 AACTGGACACTCAACCCCTTTCACATGATGGGAGTTGCAGGTATCCTGGGTGGTGCTCTG 179523 |||||||| | ||||| || || |||||||| || || ||| | || || | |||||| Sbjct 17567 AACTGGACTTTAAACCCTTTCCATATGATGGGTGTAGCGGGTGTACTTGGAGCTGCTCTA 17508 Query 179524 CTCTCTGCTATTCATGGAGTAACTGTAGAGAATACATTGTATGAAGATGGAGAACAAGCA 179583 || | ||| |||||||| | ||||||||| ||||| | | ||| ||||| || ||| Sbjct 17507 CTTTGTGCAATTCATGGCGCAACTGTAGAAAATACGCTTTTTGAGGATGGTGATGGTGCA 17448 Query 179584 AACACATTTAAAGCGTTCGACTCTACGCAAGAGGAGGAGACCTATTCTATGGTTA 179638 |||||||| || || || | || |||| || || || || || ||||||| Sbjct 17447 AACACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACATACTCAATGGTTA 17393 Score = 412 bits (456), Expect = 4e-110 Identities = 524/715 (73%), Gaps = 6/715 (1%) Strand=Plus/Minus Query 178926 AACGAGGGGCTGGTTCGATGTCTTGGATGACTGGCTTAATCGGGATCGCTTTGTCTTTGT 178985 ||||||| ||||| ||||| | |||||||||||| ||| || || || |||||| | Sbjct 147548 AACGAGGT--TGGTTTGATGTAGTAGATGACTGGCTTCGTCGTGACCGTTTCGTCTTTCT 147491 Query 178986 GGGTTGGTCTGGACTCCTACTTCTTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTAC 179045 || ||||| || | || | | || || || || || || |||| |||||| |||| Sbjct 147490 AGGATGGTCAGGGTTATTATTATTGCCTACAGCATACCTGGCACTTGGTGGTTGGTTTAC 147431 Query 179046 TGGGACAGCTTTTGTTACGAGTTGGTACACCCATGGTCTTGCTAGTTCCTATCTTGAAGG 179105 || || | ||||| ||| |||||| || |||||| | || ||| ||| | ||||| Sbjct 147430 AGGAACTACATTTGTAACGTCTTGGTATACTCATGGTTTAGCATCTTCATATTTAGAAGG 147371 Query 179106 TGCTAACTTTCTTA-CGGCAGCTGTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTC 179164 ||| ||||||| | |||||||| || || || || || ||||||||||||| | Sbjct 147370 ATGTAA-TTTCTTAACAGCAGCTGTTTCAACTCCAGCGAATAGTATGGGTCATTCTTTAT 147312 Query 179165 TTCTACTTTGGGGTCCTGAGTCTCAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGAC 179224 | | |||||||| || || |||| || ||||| || ||||| |||||||| || | Sbjct 147311 TATTCCTTTGGGGCCCAGAAGCTCAAGGCGATTTCACACGTTGGTGTCAACTTGGTGGTC 147252 Query 179225 TATGGAATTTCGTGGCTCTCCACGGTGCCTTCGCCCTAATTGGATTCATGCTTCGTCAGT 179284 |||||| || || ||||| |||||||| || || || ||||| || ||||||||||||| Sbjct 147251 TATGGACGTTTGTTGCTCTTCACGGTGCATTTGCTCTGATTGGTTTTATGCTTCGTCAGT 147192 Query 179285 TTGAACTGGCACGTCTCA-TCGGTATCCGTCCTTACAATGCGATTGCTTTTACTGGTCCT 179343 ||||| | |||||| ||| | || || |||||||| || ||||| ||| | | || Sbjct 147191 TTGAAATTGCACGT-TCAGTAAAGATTCGCCCTTACAACGCAATTGCATTTTCAGCACCA 147133 Query 179344 ATTGCCGTATTCGTTAGTGTATTTCTCATCTACCCACTTGGACAATCCAGTTGGTTCTTT 179403 ||| | ||||||||| |||||| | || ||||| | |||||||| ||||||||||| Sbjct 147132 ATTTCTGTATTCGTTTCTGTATTCTTAATTTACCCTTTAGGACAATCTGGTTGGTTCTTT 147073 Query 179404 GCGCCATCGTTTGGTGTTGCGGCGATCTTTAGATTCCTACTTTTCTTACAAGGTTTCCAC 179463 || ||| ||||||||||| || || || ||||| | | ||||| ||||||||||| Sbjct 147072 GCACCAAGCTTTGGTGTTGCTGCAATTTTCCGATTCATTTTATTCTTCCAAGGTTTCCAT 147013 Query 179464 AACTGGACACTCAACCCCTTTCACATGATGGGAGTTGCAGGTATCCTGGGTGGTGCTCTG 179523 |||||||| | ||||| || || |||||||| || || ||| | || || | |||||| Sbjct 147012 AACTGGACTTTAAACCCTTTCCATATGATGGGTGTAGCGGGTGTACTTGGAGCTGCTCTA 146953 Query 179524 CTCTCTGCTATTCATGGAGTAACTGTAGAGAATACATTGTATGAAGATGGAGAACAAGCA 179583 || | ||| |||||||| | ||||||||| ||||| | | ||| ||||| || ||| Sbjct 146952 CTTTGTGCAATTCATGGCGCAACTGTAGAAAATACGCTTTTTGAGGATGGTGATGGTGCA 146893 Query 179584 AACACATTTAAAGCGTTCGACTCTACGCAAGAGGAGGAGACCTATTCTATGGTTA 179638 |||||||| || || || | || |||| || || || || || ||||||| Sbjct 146892 AACACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACATACTCAATGGTTA 146838 Score = 174 bits (192), Expect = 2e-38 Identities = 229/315 (73%), Gaps = 2/315 (1%) Strand=Plus/Minus Query 179638 ACAGCGAACCGTTTTTGGTCGCAGATCTTCGGGGTTCCGTTTAGCAATAAGCGTTGGTTC 179697 || || || ||||| ||||| || || || || || | ||| ||||| |||||||| Sbjct 16348 ACTGCAAATCGTTTCTGGTCACAAATTTTTGGTGTAGCTTTTTCAAATAAACGTTGGTTA 16289 Query 179698 CACTTCTTTAAGCTGTTTGTTCCTGTCATGGGTCTTTGGGTCTCTTCTATTGGCATCATT 179757 |||||||||| | | |||||||| || | ||||||||| | | | ||||| | | Sbjct 16288 CACTTCTTTATGTTATTTGTTCCGGTAACTGGTCTTTGGATGAGTGCAATTGGTGTAGTA 16229 Query 179758 GGGCTAGCTCTTAATCTT-CGTGCTTATGATTTTGTGAGTCAAGAGATCAGAGCAGCAGA 179816 || ||||| |||| ||| ||||| |||||||| || ||||| || | || || || Sbjct 16228 GGTTTAGCT-TTAAACTTACGTGCGTATGATTTCGTTTCACAAGAAATTCGCGCTGCGGA 16170 Query 179817 AGATCCTGAGTTCGAGACGTTCTATACAAAGAACATTCTTCTGAATGAAGGACTACGTGC 179876 ||||||||| || || || ||||||||||| || |||||| | || ||||| | ||||| Sbjct 16169 AGATCCTGAATTTGAAACTTTCTATACAAAAAATATTCTTTTAAACGAAGGTATTCGTGC 16110 Query 179877 TTGGTTGGCACCTGCTGATCAACCACATGAAAACTTCATCTTCCCAGAAGAAGTCCTACC 179936 |||| |||| || ||||| || |||||||| | | ||||| || || || |||| Sbjct 16109 TTGGATGGCTGCTCAAGATCAGCCTCATGAAAAACTTGTATTCCCTGAGGAGGTTTTACC 16050 Query 179937 TAGTGGTAACGCACT 179951 |||| ||||| || Sbjct 16049 ACGTGGAAACGCTCT 16035 Score = 174 bits (192), Expect = 2e-38 Identities = 229/315 (73%), Gaps = 2/315 (1%) Strand=Plus/Minus Query 179638 ACAGCGAACCGTTTTTGGTCGCAGATCTTCGGGGTTCCGTTTAGCAATAAGCGTTGGTTC 179697 || || || ||||| ||||| || || || || || | ||| ||||| |||||||| Sbjct 145793 ACTGCAAATCGTTTCTGGTCACAAATTTTTGGTGTAGCTTTTTCAAATAAACGTTGGTTA 145734 Query 179698 CACTTCTTTAAGCTGTTTGTTCCTGTCATGGGTCTTTGGGTCTCTTCTATTGGCATCATT 179757 |||||||||| | | |||||||| || | ||||||||| | | | ||||| | | Sbjct 145733 CACTTCTTTATGTTATTTGTTCCGGTAACTGGTCTTTGGATGAGTGCAATTGGTGTAGTA 145674 Query 179758 GGGCTAGCTCTTAATCTT-CGTGCTTATGATTTTGTGAGTCAAGAGATCAGAGCAGCAGA 179816 || ||||| |||| ||| ||||| |||||||| || ||||| || | || || || Sbjct 145673 GGTTTAGCT-TTAAACTTACGTGCGTATGATTTCGTTTCACAAGAAATTCGCGCTGCGGA 145615 Query 179817 AGATCCTGAGTTCGAGACGTTCTATACAAAGAACATTCTTCTGAATGAAGGACTACGTGC 179876 ||||||||| || || || ||||||||||| || |||||| | || ||||| | ||||| Sbjct 145614 AGATCCTGAATTTGAAACTTTCTATACAAAAAATATTCTTTTAAACGAAGGTATTCGTGC 145555 Query 179877 TTGGTTGGCACCTGCTGATCAACCACATGAAAACTTCATCTTCCCAGAAGAAGTCCTACC 179936 |||| |||| || ||||| || |||||||| | | ||||| || || || |||| Sbjct 145554 TTGGATGGCTGCTCAAGATCAGCCTCATGAAAAACTTGTATTCCCTGAGGAGGTTTTACC 145495 Query 179937 TAGTGGTAACGCACT 179951 |||| ||||| || Sbjct 145494 ACGTGGAAACGCTCT 145480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 605664921177160