Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq286 104 2e-17 seq280 104 2e-17 seq242 100 3e-16 seq53 95.1 1e-14 >seq286 Length=1206827 Score = 104 bits (114), Expect = 2e-17 Identities = 86/105 (82%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||||||||| ||||| || ||||| || ||| |||| |||||| ||||||||||| Sbjct 1113214 GGTGGACTCCTTCTGGATGTTGTAGTCTGCCAGCGTGCGGCCGTCCTCCAGCTGCTTGCC 1113155 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTC 133567 |||| | || || |||||||||||||| |||||||| |||||||| Sbjct 1113154 CGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTC 1113110 Score = 104 bits (114), Expect = 2e-17 Identities = 86/105 (82%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||||||||| ||||| || ||||| || ||| |||| |||||| ||||||||||| Sbjct 1113719 GGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGCGTGCGGCCGTCCTCCAGCTGCTTGCC 1113660 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTC 133567 |||| | || || |||||||||||||| |||||||| |||||||| Sbjct 1113659 CGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTC 1113615 >seq280 Length=4282644 Score = 104 bits (114), Expect = 2e-17 Identities = 86/105 (82%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||||||||| ||||| || ||||| || ||| |||| |||||| ||||||||||| Sbjct 2001498 GGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGCGTGCGGCCGTCCTCCAGCTGCTTGCC 2001557 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTC 133567 |||| | || || |||||||||||||| |||||||| |||||||| Sbjct 2001558 CGCGAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTC 2001602 Score = 104 bits (114), Expect = 2e-17 Identities = 86/105 (82%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||||||||| ||||| || ||||| || ||| |||| |||||| ||||||||||| Sbjct 2002053 GGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGCGTGCGGCCGTCCTCCAGCTGCTTGCC 2002112 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTC 133567 |||| | || || |||||||||||||| |||||||| |||||||| Sbjct 2002113 CGCGAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTC 2002157 Score = 104 bits (114), Expect = 2e-17 Identities = 86/105 (82%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||||||||| ||||| || ||||| || ||| |||| |||||| ||||||||||| Sbjct 2002608 GGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGCGTGCGGCCGTCCTCCAGCTGCTTGCC 2002667 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTC 133567 |||| | || || |||||||||||||| |||||||| |||||||| Sbjct 2002668 CGCGAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTC 2002712 Score = 104 bits (114), Expect = 2e-17 Identities = 86/105 (82%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||||||||| ||||| || ||||| || ||| |||| |||||| ||||||||||| Sbjct 2003163 GGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGCGTGCGGCCGTCCTCCAGCTGCTTGCC 2003222 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTC 133567 |||| | || || |||||||||||||| |||||||| |||||||| Sbjct 2003223 CGCGAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTC 2003267 Score = 95.1 bits (104), Expect = 1e-14 Identities = 79/97 (81%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||||||||| ||||| || ||||| || ||| |||| |||||| ||||||||||| Sbjct 2003723 GGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGCGTGCGGCCGTCCTCCAGCTGCTTGCC 2003782 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCT 133559 |||| | || || |||||||||||||| ||||||||| Sbjct 2003783 CGCGAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCT 2003819 >seq242 Length=371688 Score = 100 bits (110), Expect = 3e-16 Identities = 85/105 (81%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||||||||| ||||| || ||||| || ||| |||| |||||| ||||||||||| Sbjct 197824 GGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGCGTGCGGCCGTCCTCCAGCTGCTTGCC 197883 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTC 133567 |||| | || || ||||||||||| || |||||||| |||||||| Sbjct 197884 CGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTC 197928 >seq53 Length=124359 Score = 95.1 bits (104), Expect = 1e-14 Identities = 79/97 (81%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||||||||| ||||| || ||||| || ||| |||| |||||| ||||||||||| Sbjct 80701 GGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGCGTGCGGCCGTCCTCCAGCTGCTTGCC 80760 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCT 133559 |||| | || || |||||||||||||| ||||||||| Sbjct 80761 CGCGAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCT 80797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483418981129240