Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_025456.1 Length=46547 Score E Sequences producing significant alignments: (Bits) Value seq52 600 4e-167 >seq52 Length=149364 Score = 600 bits (664), Expect = 4e-167 Identities = 667/883 (76%), Gaps = 8/883 (1%) Strand=Plus/Minus Query 19598 TTCATTATTGCATTCATTGCGGCTCCACCAGTTGACATTGATGGCATCCGCGAACCCGTA 19657 || || || ||||| || || ||||| || || || || ||||| ||||| || || || Sbjct 86096 TTTATCATCGCATTTATCGCAGCTCCGCCTGTCGATATCGATGGTATCCGTGAGCCTGTT 86037 Query 19658 TCCGGTAGCCTTCTTTATGGAAACAACATCATATCGGGAGCCGTCGTTCCGAGCAGCAAT 19717 || ||| | || ||||||||||| ||||| | || || | |||| | || Sbjct 86036 TCAGGTTCATTACTATATGGAAACAATATCATCACTGGTGCTATTATTCCAACTTCTAAC 85977 Query 19718 GCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAGTTCACTTGATGAATGGCTCTAC 19777 || ||||| ||||||||||||||||||||||||| ||| |||||||| ||| | ||| Sbjct 85976 GCTATCGGTTTACACTTCTACCCAATTTGGGAAGCAGCTTCTCTTGATGAGTGGTTATAC 85917 Query 19778 AACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCATCTATGCTTACATG 19837 || || || || | ||||||| | || | ||| ||| || | ||| | | | | |||||| Sbjct 85916 AATGGTGGTCCTTACCAACTTATCGTTTGCCATTTCTTCTTAGGCGTTTGTTCATACATG 85857 Query 19838 GGACGAGAGTGGGAACTTAGCTAT-CGACTAGGAATGAGGCCTTGGATTTGTGTTGCCTA 19896 || || ||||||||| ||| || | || |||| ||| | |||||||| ||||| || Sbjct 85856 GGTCGTGAGTGGGAA-TTATCTTTTCGTTTAGGTATGCGTCCTTGGATCGCAGTTGCTTA 85798 Query 19897 CTCTGCTCCGGTTGCAGCCGCCTCTGCGGTCTTTCTCGTCTACCCGTTTGGTCAGGGTAG 19956 ||| || || ||||| || || | || || || || | || || | ||||| ||| Sbjct 85797 CTCAGCACCAGTTGCTGCAGCTACAGCTGTATTCATCATTTATCCAATCGGTCAAGGTTC 85738 Query 19957 CTTCTCCGATGCTATGCCTTTGGGTATCTCGGGTACGTTCAACTACATGTTGGTATTCCA 20016 ||||| |||| ||||||||| |||||||| ||||| ||||||| |||| | |||||||| Sbjct 85737 TTTCTCTGATGGTATGCCTTTAGGTATCTCTGGTACTTTCAACTTCATGATCGTATTCCA 85678 Query 20017 AGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTTGGTGTGGCTGGTGTATTCGG 20076 ||| || || ||||| || |||||||| ||||| ||||||||||| ||||||||||| || Sbjct 85677 AGCTGAGCACAACATCCTTATGCACCCATTCCATATGCTTGGTGTTGCTGGTGTATTTGG 85618 Query 20077 TGGGTCACTATTCAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTGTGCGTGAGAC 20136 ||| ||| ||||| ||| ||||||||||| ||||| || || || | | ||||| || Sbjct 85617 TGGTTCATTATTCTCTGCTATGCACGGTTCACTTGTAACTTCTTCTTTAATTCGTGAAAC 85558 Query 20137 TACTGAACAGGAAAGTCAG--AACTATGGTTACAAGTTTGGGCAAGAAGAAGAGACCTAT 20194 |||||| | ||| |||| ||| | |||||||| || || ||||||||||| || || Sbjct 85557 AACTGAAAACGAA--TCAGCTAACGAAGGTTACAAATTCGGTCAAGAAGAAGAAACTTAC 85500 Query 20195 AACATCGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTCCAATACGCTTCTTTCAAC 20254 |||||||| || |||||||| ||||| || ||||| || |||||||| |||||||||||| Sbjct 85499 AACATCGTTGCAGCTCATGGCTACTTCGGTCGTTTAATTTTCCAATATGCTTCTTTCAAC 85440 Query 20255 AATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCT 20314 || ||||| |||| |||||| | ||||| ||||| || || || ||||||||| || Sbjct 85439 AACTCTCGTTCATTACATTTCTTCTTAGCTGCTTGGCCAGTTGTTGGTATTTGGTTCACT 85380 Query 20315 GCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTCAACTTTAACCAGTCCCTT 20374 || || || |||| || ||||| || || | || ||||||||||| ||||| || || Sbjct 85379 GCTTTAGGTATTTCAACTATGGCATTCAACTTAAATGGTTTCAACTTCAACCAATCAGTT 85320 Query 20375 CTCGA-CAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAATCT 20433 | || |||| |||||||| || | |||||||| |||||| |||| ||||| || || Sbjct 85319 GTAGATTCACAA-GGTCGTGTAATCAACACTTGGGCAGACATTATCAACCGTGCCAACCT 85261 Query 20434 CGGGTTTGAGGTGATGCATGAACGGAATGCTCATAACTTCCCA 20476 || | || || |||||||| || || ||||| ||||||||| Sbjct 85260 TGGTATGGAAGTAATGCATGAGCGTAACGCTCACAACTTCCCA 85218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148828268030058