Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_025461.1 Length=45871 Score E Sequences producing significant alignments: (Bits) Value seq52 560 3e-155 >seq52 Length=149364 Score = 560 bits (620), Expect = 3e-155 Identities = 663/893 (74%), Gaps = 4/893 (0%) Strand=Plus/Minus Query 28726 TTCATTATTGCATTCATTGCGGCACCACCAGTTGACATTGATGGCATCCGCGAACCTGTC 28785 || || || ||||| || || || || || || || || ||||| ||||| || ||||| Sbjct 86096 TTTATCATCGCATTTATCGCAGCTCCGCCTGTCGATATCGATGGTATCCGTGAGCCTGTT 86037 Query 28786 GCTGGAAGTCTTCTCTATGGAAACAACATCATATCGGGAGCCGTCGTACCGAGCAGCAAT 28845 | || | || ||||||||||| ||||| | || || | | || | || Sbjct 86036 TCAGGTTCATTACTATATGGAAACAATATCATCACTGGTGCTATTATTCCAACTTCTAAC 85977 Query 28846 GCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAATGGCTCTAC 28905 || ||||| ||||||||||||||||||||||||| ||| |||||||| ||| | ||| Sbjct 85976 GCTATCGGTTTACACTTCTACCCAATTTGGGAAGCAGCTTCTCTTGATGAGTGGTTATAC 85917 Query 28906 AACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGTCTATGCTTACATG 28965 || || || || | ||||||| | || | ||| ||| || | ||||| | | | |||||| Sbjct 85916 AATGGTGGTCCTTACCAACTTATCGTTTGCCATTTCTTCTTAGGCGTTTGTTCATACATG 85857 Query 28966 GGACGCGAGTGGGAACTTAGCTAT-CGACTAGGAATGAGGCCGTGGATTTGTGTCGCATA 29024 || || ||||||||| ||| || | || |||| ||| | || ||||| || || || Sbjct 85856 GGTCGTGAGTGGGAA-TTATCTTTTCGTTTAGGTATGCGTCCTTGGATCGCAGTTGCTTA 85798 Query 29025 CTCAGCTCCCGTCGCAGCGGCATCTGCGGTTTTCCTCGTCTACCCATTCGGTCAAGGTTC 29084 |||||| || || || || || | || || ||| || | || ||| ||||||||||||| Sbjct 85797 CTCAGCACCAGTTGCTGCAGCTACAGCTGTATTCATCATTTATCCAATCGGTCAAGGTTC 85738 Query 29085 TTTTAGCGACGCGATGCCTTTGGGTATTTCAGGCACCTTCAACTACATGCTGGTGTTCCA 29144 ||| || | |||||||| ||||| || || || ||||||| |||| | || ||||| Sbjct 85737 TTTCTCTGATGGTATGCCTTTAGGTATCTCTGGTACTTTCAACTTCATGATCGTATTCCA 85678 Query 29145 AGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTGGGCGTTGCTGGAGTGTTCGG 29204 ||| || || ||||| || |||||||| ||||| ||||| || |||||||| || || || Sbjct 85677 AGCTGAGCACAACATCCTTATGCACCCATTCCATATGCTTGGTGTTGCTGGTGTATTTGG 85618 Query 29205 TGGCTCGCTATTTAGTGCAATGCACGGTTCGCTTGTCACGTCCTCGCTTGTGCGTGAGAC 29264 ||| || |||| ||| ||||||||||| ||||| || || || | | ||||| || Sbjct 85617 TGGTTCATTATTCTCTGCTATGCACGGTTCACTTGTAACTTCTTCTTTAATTCGTGAAAC 85558 Query 29265 GACTGAAGACATCTCTCAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAGACTTATAA 29324 |||||| || || ||| | |||||||| || || ||||||||||| ||||| || Sbjct 85557 AACTGAAAACGAATCAGCTAACGAAGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAA 85498 Query 29325 CATCGTAGCCGCTCACGGTTACTTTGGACGTTTGATCTTCCAATATGCTTCTTTCAATAA 29384 |||||| || ||||| || ||||| || ||||| || |||||||||||||||||||| || Sbjct 85497 CATCGTTGCAGCTCATGGCTACTTCGGTCGTTTAATTTTCCAATATGCTTCTTTCAACAA 85438 Query 29385 TAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGC 29444 ||||| |||| |||||| | ||||| ||||| || || || ||||||||| |||| Sbjct 85437 CTCTCGTTCATTACATTTCTTCTTAGCTGCTTGGCCAGTTGTTGGTATTTGGTTCACTGC 85378 Query 29445 CTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTTAACTTTAACCAGTCGCTTCT 29504 || || |||| || ||||| || || | || ||||| ||||| ||||| || || | Sbjct 85377 TTTAGGTATTTCAACTATGGCATTCAACTTAAATGGTTTCAACTTCAACCAATCAGTTGT 85318 Query 29505 CGACA-ACAATGGTCGTGTCATTAATACTTGGGCTGATGTTCTCAATCGCGCTAACCTCG 29563 || |||| |||||||| || || |||||||| || || |||| || || ||||| | Sbjct 85317 AGATTCACAA-GGTCGTGTAATCAACACTTGGGCAGACATTATCAACCGTGCCAACCTTG 85259 Query 29564 GCTTTGAAGTAATGCATGAGCGTAATGCTCATAACTTCCCACTTGATCTGGCT 29616 | | |||||||||||||||||||| ||||| ||||||||| | ||| | ||| Sbjct 85258 GTATGGAAGTAATGCATGAGCGTAACGCTCACAACTTCCCATTAGATTTAGCT 85206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146665075762146