Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_025464.1 Length=44147 Score E Sequences producing significant alignments: (Bits) Value seq52 648 0.0 >seq52 Length=149364 Score = 648 bits (718), Expect = 0.0 Identities = 751/1003 (75%), Gaps = 7/1003 (1%) Strand=Plus/Minus Query 18709 AACCCTTGGGACTC-TTTTTGTGACTGGGTAACCAGTACAGATAACCGTCTTTATATCGG 18767 || |||| || ||| ||||||||| |||||||| || || || |||||| | || ||||| Sbjct 86205 AAGCCTTTGGGCTCGTTTTTGTGAGTGGGTAACTAGCACTGAAAACCGTTTATACATCGG 86146 Query 18768 CTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCAGCTACTATTTGT-TTCATTATTG 18826 |||||||| | ||||| || | | | |||||||| | || || || || | Sbjct 86145 TTGGTTTGGTGTGTTAATGATCCCTACTTTATTAACAGCTACT-TCAGTATTTATCATCG 86087 Query 18827 CCTTCATTGCTGCACCTCCTGTAGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTC 18886 | || || || || || ||||| || || ||||| ||||| ||||||||| |||| Sbjct 86086 CATTTATCGCAGCTCCGCCTGTCGATATCGATGGTATCCGTGAGCCTGTTTCAGGTTCAT 86027 Query 18887 TTCTTTATGGAAACAACATCATATCGGGAGCCGTCGTTCCGAGCAGCAATGCCATCGGAC 18946 | || ||||||||||| ||||| | || || | |||| | || || ||||| Sbjct 86026 TACTATATGGAAACAATATCATCACTGGTGCTATTATTCCAACTTCTAACGCTATCGGTT 85967 Query 18947 TACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGAC 19006 ||||||||||||||||||||||||| ||| |||||||| ||| | ||||| || || | Sbjct 85966 TACACTTCTACCCAATTTGGGAAGCAGCTTCTCTTGATGAGTGGTTATACAATGGTGGTC 85907 Query 19007 CGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGT 19066 | | ||||||| | || | ||| ||| || | ||||| | | | |||||||| || |||| Sbjct 85906 CTTACCAACTTATCGTTTGCCATTTCTTCTTAGGCGTTTGTTCATACATGGGTCGTGAGT 85847 Query 19067 GGGAACTTAGCTAT-CGACTAGGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCT 19125 ||||| ||| || | || |||| ||||| |||||||| ||||| |||||||| || Sbjct 85846 GGGAA-TTATCTTTTCGTTTAGGTATGCGTCCTTGGATCGCAGTTGCTTACTCAGCACCA 85788 Query 19126 GTTGCCGCAGCCTCTGCGGTCTTCCTTGTCTATCCATTTGGTCAAGGTTCCTTTAGCGAC 19185 ||||| ||||| | || || ||| | | |||||| | ||||||||||| || || Sbjct 85787 GTTGCTGCAGCTACAGCTGTATTCATCATTTATCCAATCGGTCAAGGTTCTTTCTCTGAT 85728 Query 19186 GCTATGCCTTTGGGTATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACAT 19245 | ||||||||| ||||| |||||| ||||||| |||| | |||||||| ||||| || Sbjct 85727 GGTATGCCTTTAGGTATCTCTGGTACTTTCAACTTCATGATCGTATTCCAAGCTGAGCAC 85668 Query 19246 AACATCCTCATGCACCCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTA 19305 |||||||| |||||||| ||||| ||||| ||||| |||||||| || || || ||| || Sbjct 85667 AACATCCTTATGCACCCATTCCATATGCTTGGTGTTGCTGGTGTATTTGGTGGTTCATTA 85608 Query 19306 TTTAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTGTGCGTGAAACTACTGAAGAG 19365 || ||| ||||||||||| ||||| || || || | | |||||||| |||||| | Sbjct 85607 TTCTCTGCTATGCACGGTTCACTTGTAACTTCTTCTTTAATTCGTGAAACAACTGAAAAC 85548 Query 19366 GTATCTCAGAACTATGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCT 19425 | ||| ||| | || ||||| || || ||||||||||| ||||| ||||| ||||| Sbjct 85547 GAATCAGCTAACGAAGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCA 85488 Query 19426 GCTCATGGGTATTTTGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCT 19485 |||||||| || || ||||| | |||||||| || || || |||||||| ||||| Sbjct 85487 GCTCATGGCTACTTCGGTCGTTTAATTTTCCAATATGCTTCTTTCAACAACTCTCGTTCA 85428 Query 19486 CTACATTTCTTTTTGGCTGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTA 19545 |||||||||| || ||||||||||| || ||||| |||||||| | || | || | Sbjct 85427 TTACATTTCTTCTTAGCTGCTTGGCCAGTTGTTGGTATTTGGTTCACTGCTTTAGGTATT 85368 Query 19546 AGCACCATGGCATTCAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGA-CAACAA 19604 || |||||||||||||| ||||| || ||||| ||||| || || | || |||| Sbjct 85367 TCAACTATGGCATTCAACTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAA 85308 Query 19605 TGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGT 19664 |||||||| || | |||||||| |||||| |||| ||||| ||||| || | || || Sbjct 85307 -GGTCGTGTAATCAACACTTGGGCAGACATTATCAACCGTGCCAACCTTGGTATGGAAGT 85249 Query 19665 AATGCACGAACGTAATGCTCATAACTTCCCACTTGATTTGGCT 19707 |||||| || ||||| ||||| ||||||||| | ||||| ||| Sbjct 85248 AATGCATGAGCGTAACGCTCACAACTTCCCATTAGATTTAGCT 85206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141148295481258