Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_026923.1 Length=179110 Score E Sequences producing significant alignments: (Bits) Value seq52 827 0.0 >seq52 Length=149364 Score = 827 bits (916), Expect = 0.0 Identities = 788/1005 (78%), Gaps = 2/1005 (0%) Strand=Plus/Minus Query 157676 TTCTGCGAGTGGGTAACCTCAACCAACAACCGTTTGTATGTTGGTTGGTTCGGTGTACTG 157735 || || ||||||||||| || | |||||||| || | |||||||| ||||| | Sbjct 86189 TTTTGTGAGTGGGTAACTAGCACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTGTTA 86130 Query 157736 ATGATTCCTACGTTGCTTGCTGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 157794 ||||| ||||| || | | || ||| || || || ||| |||| || |||| ||||| Sbjct 86129 ATGATCCCTACTTTATTAACAGCTACT-TCAGTATTTATCATCGCATTTATCGCAGCTCC 86071 Query 157795 CCCTGTGGACATTGACGGCATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACAA 157854 ||||| || || || || ||||| || || ||| | |||||| | | ||||| ||||| Sbjct 86070 GCCTGTCGATATCGATGGTATCCGTGAGCCTGTTTCAGGTTCATTACTATATGGAAACAA 86011 Query 157855 CATCATCTCTGGTGCAGTTGTTCCTAGTTCAAACGCAATCGGTCTCCACTTCTACCCCAT 157914 |||||| ||||||| || |||| | ||| ||||| |||||| | ||||||||||| || Sbjct 86010 TATCATCACTGGTGCTATTATTCCAACTTCTAACGCTATCGGTTTACACTTCTACCCAAT 85951 Query 157915 CTGGGAAGCAGCATCTCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCCAACTTGTAGT 157974 ||||||||||| |||||||| |||||| | || || |||||||||| ||||||| | || Sbjct 85950 TTGGGAAGCAGCTTCTCTTGATGAGTGGTTATACAATGGTGGTCCTTACCAACTTATCGT 85891 Query 157975 ATTCCACTTCCTGATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTCTCTTACCG 158034 | ||| ||| | | ||| | | | | || ||||| |||||||||||| | |||| || Sbjct 85890 TTGCCATTTCTTCTTAGGCGTTTGTTCATACATGGGTCGTGAGTGGGAATTATCTTTTCG 85831 Query 158035 TTTAGGTATGCGCCCATGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCGAGTGC 158094 |||||||||||| || |||||| || || || || || ||||| |||||||| | || Sbjct 85830 TTTAGGTATGCGTCCTTGGATCGCAGTTGCTTACTCAGCACCAGTTGCTGCAGCTACAGC 85771 Query 158095 AGTATTCCTAGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTAT 158154 |||||| | | ||||| ||||||||||||||||||| |||| ||||||| | ||||| Sbjct 85770 TGTATTCATCATTTATCCAATCGGTCAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTAT 85711 Query 158155 CTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACCC 158214 |||||||||||| |||| |||| | ||||||||||| || |||||||||||||||||||| Sbjct 85710 CTCTGGTACTTTCAACTTCATGATCGTATTCCAAGCTGAGCACAACATCCTTATGCACCC 85651 Query 158215 GTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGG 158274 ||||||||||| ||||||||||| ||||| ||||| || | |||||||||||||| || Sbjct 85650 ATTCCATATGCTTGGTGTTGCTGGTGTATTTGGTGGTTCATTATTCTCTGCTATGCACGG 85591 Query 158275 AAGTCTCGTTACTTCCTCACTCGTTCGTGAAACGACTGAAACAGAGTCACAGAACTACGG 158334 || || ||||| || | |||||||||| ||||||| || ||| ||| | || Sbjct 85590 TTCACTTGTAACTTCTTCTTTAATTCGTGAAACAACTGAAAACGAATCAGCTAACGAAGG 85531 Query 158335 TTATAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCAGCCCATGGCTACTTCGG 158394 ||| || ||||||||||||||||| || ||||||||||||||||| |||||||||||||| Sbjct 85530 TTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCATGGCTACTTCGG 85471 Query 158395 TCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGC 158454 |||||| || |||||||| ||||| ||||||||||| ||||| || || |||||| | || Sbjct 85470 TCGTTTAATTTTCCAATATGCTTCTTTCAACAACTCTCGTTCATTACATTTCTTCTTAGC 85411 Query 158455 TGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCAACCATGGCATTCAA 158514 ||| ||||| ||||| || || |||||||| || | || | ||||| ||||||||||| Sbjct 85410 TGCTTGGCCAGTTGTTGGTATTTGGTTCACTGCTTTAGGTATTTCAACTATGGCATTCAA 85351 Query 158515 CCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACAC 158574 | | || ||||||||||||||||| || | | ||| || |||||||| | ||||| Sbjct 85350 CTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAAGGTCGTGTAATCAACAC 85291 Query 158575 CTGGGCAGATGTACTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGC 158634 |||||||| | | ||||| || |||||||||||||| ||||||||||||||||| Sbjct 85290 TTGGGCAGACATTATCAACCGTGCCAACCTTGGTATGGAAGTAATGCATGAGCGTAACGC 85231 Query 158635 ACACAACTTCCCACTGGATCTTGCTGCTGCTGAGTCTACACCTGT 158679 |||||||||||| | ||| | |||| || ||| || || |||| Sbjct 85230 TCACAACTTCCCATTAGATTTAGCTGTTGTTGAAGCTCCAGCTGT 85186 Score = 414 bits (458), Expect = 1e-110 Identities = 519/711 (73%), Gaps = 2/711 (0%) Strand=Plus/Minus Query 159366 AACGAGGGGGTGGTTTGATGTCCTGGATGACTGGCTTAAACGAGATCGCTTTGTCTTTGT 159425 ||||||| ||||||||||| | |||||||||||| || || || || |||||| | Sbjct 18103 AACGAGGT--TGGTTTGATGTAGTAGATGACTGGCTTCGTCGTGACCGTTTCGTCTTTCT 18046 Query 159426 GGGTTGGTCTGGACTCCTACTTCTTCCCACTGCTTATATGGCCATTGGCGGTTGGCTTAC 159485 || ||||| || | || | | || || || || |||| |||| |||||| |||| Sbjct 18045 AGGATGGTCAGGGTTATTATTATTGCCTACAGCATACCTGGCACTTGGTGGTTGGTTTAC 17986 Query 159486 TGGCACGACTTTTATCACGAGTTGGTACACCCACGGTCTTGCTAGTTCCTACCTTGAAGG 159545 || || || ||| | ||| |||||| || || ||| | || ||| || | ||||| Sbjct 17985 AGGAACTACATTTGTAACGTCTTGGTATACTCATGGTTTAGCATCTTCATATTTAGAAGG 17926 Query 159546 TGCTAATTTTCTCACGGCAGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCT 159605 |||||| | || |||||||| ||||| || || || ||||||||||||| | | Sbjct 17925 ATGTAATTTCTTAACAGCAGCTGTTTCAACTCCAGCGAATAGTATGGGTCATTCTTTATT 17866 Query 159606 TCTACTTTGGGGTCCTGAGTCTCAAGGCGACTTCCAACGCTGGTGCCAACTTGGAGGGAT 159665 | |||||||| || || |||||||||| ||| ||| ||||| |||||||| || | Sbjct 17865 ATTCCTTTGGGGCCCAGAAGCTCAAGGCGATTTCACACGTTGGTGTCAACTTGGTGGTCT 17806 Query 159666 TTGGTCCTTTGTTGCTCTCCACGGTGCATTCGCTCTCATAGGTTTTATGCTACGGCAATT 159725 ||| | ||||||||||| ||||||||||| ||||| || ||||||||||| || || || Sbjct 17805 ATGGACGTTTGTTGCTCTTCACGGTGCATTTGCTCTGATTGGTTTTATGCTTCGTCAGTT 17746 Query 159726 TGAAATTGCTCGTCTAGTTGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTAT 159785 ||||||||| ||| ||| || || |||||||| || ||||| || || | || || Sbjct 17745 TGAAATTGCACGTTCAGTAAAGATTCGCCCTTACAACGCAATTGCATTTTCAGCACCAAT 17686 Query 159786 TGCTGTTTTTGTCAGCGTATTCCTTATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGC 159845 | |||| || || |||||| | || || || | || || ||| ||||||||||| Sbjct 17685 TTCTGTATTCGTTTCTGTATTCTTAATTTACCCTTTAGGACAATCTGGTTGGTTCTTTGC 17626 Query 159846 ACCTAGTTTCGGGGTAGCAGCAATCTTTAGATTCCTGTTGTTCCTTCAGGGTTTCCACAA 159905 ||| || || || || || ||||| || ||||| | || ||| | || |||||||| || Sbjct 17625 ACCAAGCTTTGGTGTTGCTGCAATTTTCCGATTCATTTTATTCTTCCAAGGTTTCCATAA 17566 Query 159906 CTGGACCCTCAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTGTT 159965 |||||| | ||||| |||||||||||||| || || ||| |||| || | || || | Sbjct 17565 CTGGACTTTAAACCCTTTCCATATGATGGGTGTAGCGGGTGTACTTGGAGCTGCTCTACT 17506 Query 159966 GTGTGCAATCCATGGTGCTACTGTAGAGAACACATTGTTTGAAGATGGAGAACAAGCAAA 160025 |||||||| ||||| || |||||||| || || | ||||| ||||| || ||||| Sbjct 17505 TTGTGCAATTCATGGCGCAACTGTAGAAAATACGCTTTTTGAGGATGGTGATGGTGCAAA 17446 Query 160026 CACATTTAAGGCGTTTGAGCCTACTCAAGAAGAAGAGACTTATTCTATGGT 160076 |||||| || ||| | || ||||||| ||||| || || || ||||| Sbjct 17445 CACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACATACTCAATGGT 17395 Score = 414 bits (458), Expect = 1e-110 Identities = 519/711 (73%), Gaps = 2/711 (0%) Strand=Plus/Minus Query 159366 AACGAGGGGGTGGTTTGATGTCCTGGATGACTGGCTTAAACGAGATCGCTTTGTCTTTGT 159425 ||||||| ||||||||||| | |||||||||||| || || || || |||||| | Sbjct 147548 AACGAGGT--TGGTTTGATGTAGTAGATGACTGGCTTCGTCGTGACCGTTTCGTCTTTCT 147491 Query 159426 GGGTTGGTCTGGACTCCTACTTCTTCCCACTGCTTATATGGCCATTGGCGGTTGGCTTAC 159485 || ||||| || | || | | || || || || |||| |||| |||||| |||| Sbjct 147490 AGGATGGTCAGGGTTATTATTATTGCCTACAGCATACCTGGCACTTGGTGGTTGGTTTAC 147431 Query 159486 TGGCACGACTTTTATCACGAGTTGGTACACCCACGGTCTTGCTAGTTCCTACCTTGAAGG 159545 || || || ||| | ||| |||||| || || ||| | || ||| || | ||||| Sbjct 147430 AGGAACTACATTTGTAACGTCTTGGTATACTCATGGTTTAGCATCTTCATATTTAGAAGG 147371 Query 159546 TGCTAATTTTCTCACGGCAGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCT 159605 |||||| | || |||||||| ||||| || || || ||||||||||||| | | Sbjct 147370 ATGTAATTTCTTAACAGCAGCTGTTTCAACTCCAGCGAATAGTATGGGTCATTCTTTATT 147311 Query 159606 TCTACTTTGGGGTCCTGAGTCTCAAGGCGACTTCCAACGCTGGTGCCAACTTGGAGGGAT 159665 | |||||||| || || |||||||||| ||| ||| ||||| |||||||| || | Sbjct 147310 ATTCCTTTGGGGCCCAGAAGCTCAAGGCGATTTCACACGTTGGTGTCAACTTGGTGGTCT 147251 Query 159666 TTGGTCCTTTGTTGCTCTCCACGGTGCATTCGCTCTCATAGGTTTTATGCTACGGCAATT 159725 ||| | ||||||||||| ||||||||||| ||||| || ||||||||||| || || || Sbjct 147250 ATGGACGTTTGTTGCTCTTCACGGTGCATTTGCTCTGATTGGTTTTATGCTTCGTCAGTT 147191 Query 159726 TGAAATTGCTCGTCTAGTTGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTAT 159785 ||||||||| ||| ||| || || |||||||| || ||||| || || | || || Sbjct 147190 TGAAATTGCACGTTCAGTAAAGATTCGCCCTTACAACGCAATTGCATTTTCAGCACCAAT 147131 Query 159786 TGCTGTTTTTGTCAGCGTATTCCTTATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGC 159845 | |||| || || |||||| | || || || | || || ||| ||||||||||| Sbjct 147130 TTCTGTATTCGTTTCTGTATTCTTAATTTACCCTTTAGGACAATCTGGTTGGTTCTTTGC 147071 Query 159846 ACCTAGTTTCGGGGTAGCAGCAATCTTTAGATTCCTGTTGTTCCTTCAGGGTTTCCACAA 159905 ||| || || || || || ||||| || ||||| | || ||| | || |||||||| || Sbjct 147070 ACCAAGCTTTGGTGTTGCTGCAATTTTCCGATTCATTTTATTCTTCCAAGGTTTCCATAA 147011 Query 159906 CTGGACCCTCAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTGTT 159965 |||||| | ||||| |||||||||||||| || || ||| |||| || | || || | Sbjct 147010 CTGGACTTTAAACCCTTTCCATATGATGGGTGTAGCGGGTGTACTTGGAGCTGCTCTACT 146951 Query 159966 GTGTGCAATCCATGGTGCTACTGTAGAGAACACATTGTTTGAAGATGGAGAACAAGCAAA 160025 |||||||| ||||| || |||||||| || || | ||||| ||||| || ||||| Sbjct 146950 TTGTGCAATTCATGGCGCAACTGTAGAAAATACGCTTTTTGAGGATGGTGATGGTGCAAA 146891 Query 160026 CACATTTAAGGCGTTTGAGCCTACTCAAGAAGAAGAGACTTATTCTATGGT 160076 |||||| || ||| | || ||||||| ||||| || || || ||||| Sbjct 146890 CACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACATACTCAATGGT 146840 Score = 188 bits (208), Expect = 8e-43 Identities = 230/314 (73%), Gaps = 0/314 (0%) Strand=Plus/Minus Query 160078 ACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTGTTGCATTTTCTAACAAGCGGTGGCTT 160137 |||||||| || |||||||| || || || ||||| || ||||| || || || ||| | Sbjct 16348 ACTGCAAATCGTTTCTGGTCACAAATTTTTGGTGTAGCTTTTTCAAATAAACGTTGGTTA 16289 Query 160138 CATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATT 160197 || || || ||||| ||||| || || | ||||| |||| | ||||| | | Sbjct 16288 CACTTCTTTATGTTATTTGTTCCGGTAACTGGTCTTTGGATGAGTGCAATTGGTGTAGTA 16229 Query 160198 GGTCTTGCTTTCAACCTTCGTGCTTACGATTTCGTGAGTCAGGAGATTAGAGCAGCAGAA 160257 ||| | ||||| ||| | ||||| || |||||||| || || ||| | || || ||| Sbjct 16228 GGTTTAGCTTTAAACTTACGTGCGTATGATTTCGTTTCACAAGAAATTCGCGCTGCGGAA 16169 Query 160258 GATCCTGAATTTGAGACCTTCTACACCAAGAACATCCTATTGAATGAAGGACTTCGTGCT 160317 |||||||||||||| || ||||| || || || || || || || ||||| |||||||| Sbjct 16168 GATCCTGAATTTGAAACTTTCTATACAAAAAATATTCTTTTAAACGAAGGTATTCGTGCT 16109 Query 160318 TGGATGGCACCTGCTGATCAACCACATGAAAACTTTATCTTCCCTGAGGAAGTACTACCT 160377 |||||||| || ||||| || |||||||| || | ||||||||||| || |||| Sbjct 16108 TGGATGGCTGCTCAAGATCAGCCTCATGAAAAACTTGTATTCCCTGAGGAGGTTTTACCA 16049 Query 160378 AGAGGTAACGCACT 160391 | || ||||| || Sbjct 16048 CGTGGAAACGCTCT 16035 Score = 188 bits (208), Expect = 8e-43 Identities = 230/314 (73%), Gaps = 0/314 (0%) Strand=Plus/Minus Query 160078 ACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTGTTGCATTTTCTAACAAGCGGTGGCTT 160137 |||||||| || |||||||| || || || ||||| || ||||| || || || ||| | Sbjct 145793 ACTGCAAATCGTTTCTGGTCACAAATTTTTGGTGTAGCTTTTTCAAATAAACGTTGGTTA 145734 Query 160138 CATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATT 160197 || || || ||||| ||||| || || | ||||| |||| | ||||| | | Sbjct 145733 CACTTCTTTATGTTATTTGTTCCGGTAACTGGTCTTTGGATGAGTGCAATTGGTGTAGTA 145674 Query 160198 GGTCTTGCTTTCAACCTTCGTGCTTACGATTTCGTGAGTCAGGAGATTAGAGCAGCAGAA 160257 ||| | ||||| ||| | ||||| || |||||||| || || ||| | || || ||| Sbjct 145673 GGTTTAGCTTTAAACTTACGTGCGTATGATTTCGTTTCACAAGAAATTCGCGCTGCGGAA 145614 Query 160258 GATCCTGAATTTGAGACCTTCTACACCAAGAACATCCTATTGAATGAAGGACTTCGTGCT 160317 |||||||||||||| || ||||| || || || || || || || ||||| |||||||| Sbjct 145613 GATCCTGAATTTGAAACTTTCTATACAAAAAATATTCTTTTAAACGAAGGTATTCGTGCT 145554 Query 160318 TGGATGGCACCTGCTGATCAACCACATGAAAACTTTATCTTCCCTGAGGAAGTACTACCT 160377 |||||||| || ||||| || |||||||| || | ||||||||||| || |||| Sbjct 145553 TGGATGGCTGCTCAAGATCAGCCTCATGAAAAACTTGTATTCCCTGAGGAGGTTTTACCA 145494 Query 160378 AGAGGTAACGCACT 160391 | || ||||| || Sbjct 145493 CGTGGAAACGCTCT 145480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 573021843997200